RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 PBX4Q9BYU1 374 aa16.75■□□□□ 0.27
SLIRP-210ENST00000557431 SPC25Q9HBM1 224 aa16.75■□□□□ 0.27
SLIRP-210ENST00000557431 FBXO40Q9UH90 709 aa16.75■□□□□ 0.27
SLIRP-210ENST00000557431 TANC1Q9C0D5 1861 aa16.75■□□□□ 0.27
SLIRP-210ENST00000557431 SPTBN5Q9NRC6 3674 aaKnown RBP16.75■□□□□ 0.27
SLIRP-210ENST00000557431 MROH7Q68CQ1 1323 aa16.74■□□□□ 0.27
SLIRP-210ENST00000557431 TMEM265A0A087WTH1 108 aa16.74■□□□□ 0.27
SLIRP-210ENST00000557431 PSMC6P62333 389 aa16.74■□□□□ 0.27
SLIRP-210ENST00000557431 TNFAIP2Q03169 654 aa16.74■□□□□ 0.27
SLIRP-210ENST00000557431 PPIGQ13427 754 aaKnown RBP eCLIP16.74■□□□□ 0.27
SLIRP-210ENST00000557431 ZMYM1Q5SVZ6 1142 aa16.74■□□□□ 0.27
SLIRP-210ENST00000557431 PPP1R13LQ8WUF5 828 aa16.74■□□□□ 0.27
SLIRP-210ENST00000557431 PRDM12Q9H4Q4 367 aa16.74■□□□□ 0.27
SLIRP-210ENST00000557431 CXXC1Q9P0U4 656 aaPredicted RBP16.74■□□□□ 0.27
SLIRP-210ENST00000557431 STX8Q9UNK0 236 aa16.74■□□□□ 0.27
SLIRP-210ENST00000557431 PCDHB15Q9Y5E8 787 aa16.74■□□□□ 0.27
SLIRP-210ENST00000557431 SCN10AQ9Y5Y9 1956 aa16.73■□□□□ 0.27
SLIRP-210ENST00000557431 KIAA1217Q5T5P2 1943 aa16.73■□□□□ 0.27
SLIRP-210ENST00000557431 RBAK-RBAKDNI3L0D1 243 aa16.73■□□□□ 0.27
SLIRP-210ENST00000557431 SMPD1P17405 629 aa16.73■□□□□ 0.27
SLIRP-210ENST00000557431 SLC1A4P43007 532 aa16.73■□□□□ 0.27
SLIRP-210ENST00000557431 OAZ1P54368 228 aa16.73■□□□□ 0.27
SLIRP-210ENST00000557431 CCL23P55773 120 aa16.73■□□□□ 0.27
SLIRP-210ENST00000557431 PDE4BQ07343 736 aa16.73■□□□□ 0.27
SLIRP-210ENST00000557431 VPS53Q5VIR6 699 aa16.73■□□□□ 0.27
SLIRP-210ENST00000557431 TLK2Q86UE8 772 aa16.73■□□□□ 0.27
SLIRP-210ENST00000557431 ZNF287Q9HBT7 754 aa16.73■□□□□ 0.27
SLIRP-210ENST00000557431 IL17RBQ9NRM6 502 aa16.73■□□□□ 0.27
SLIRP-210ENST00000557431 GRIN2DO15399 1336 aa16.72■□□□□ 0.27
SLIRP-210ENST00000557431 TLR3O15455 904 aaKnown RBP16.72■□□□□ 0.27
SLIRP-210ENST00000557431 DYNC1LI2O43237 492 aaPredicted RBP16.72■□□□□ 0.27
SLIRP-210ENST00000557431 CD4P01730 458 aa16.72■□□□□ 0.27
SLIRP-210ENST00000557431 TTBK2Q6IQ55 1244 aa16.72■□□□□ 0.27
SLIRP-210ENST00000557431 NSMFQ6X4W1 530 aa16.72■□□□□ 0.27
SLIRP-210ENST00000557431 STAG1Q8WVM7 1258 aa16.72■□□□□ 0.27
SLIRP-210ENST00000557431 NACAP1Q9BZK3 213 aa16.72■□□□□ 0.27
SLIRP-210ENST00000557431 NKX2-4Q9H2Z4 354 aa16.72■□□□□ 0.27
SLIRP-210ENST00000557431 PRR12Q9ULL5 1215 aa16.72■□□□□ 0.27
SLIRP-210ENST00000557431 GNEQ9Y223 722 aaKnown RBP16.72■□□□□ 0.27
SLIRP-210ENST00000557431 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.72■□□□□ 0.27
SLIRP-210ENST00000557431 TSPY2A6NKD2 308 aa16.71■□□□□ 0.27
SLIRP-210ENST00000557431 SLC16A2P36021 539 aa16.71■□□□□ 0.27
SLIRP-210ENST00000557431 CCDC85BQ15834 202 aaPredicted RBP16.71■□□□□ 0.27
SLIRP-210ENST00000557431 CCDC96Q2M329 555 aa16.71■□□□□ 0.27
SLIRP-210ENST00000557431 RASIP1Q5U651 963 aa16.71■□□□□ 0.27
SLIRP-210ENST00000557431 OTOP2Q7RTS6 562 aa16.71■□□□□ 0.27
SLIRP-210ENST00000557431 FAM160B2Q86V87 743 aa16.71■□□□□ 0.27
SLIRP-210ENST00000557431 TMEM199Q8N511 208 aa16.71■□□□□ 0.27
SLIRP-210ENST00000557431 GMCL1Q96IK5 515 aa16.71■□□□□ 0.27
SLIRP-210ENST00000557431 TRPV6Q9H1D0 765 aa16.71■□□□□ 0.27
SLIRP-210ENST00000557431 TTC41PQ6P2S7 1318 aa16.7■□□□□ 0.26
SLIRP-210ENST00000557431 LAMA4Q16363 1823 aa16.7■□□□□ 0.26
SLIRP-210ENST00000557431 B4GALT4O60513 344 aa16.7■□□□□ 0.26
SLIRP-210ENST00000557431 ITGA7Q13683 1181 aa16.7■□□□□ 0.26
SLIRP-210ENST00000557431 ADGRE1Q14246 886 aa16.7■□□□□ 0.26
SLIRP-210ENST00000557431 FSCN1Q16658 493 aaKnown RBP16.7■□□□□ 0.26
SLIRP-210ENST00000557431 TAPT1Q6NXT6 567 aa16.7■□□□□ 0.26
SLIRP-210ENST00000557431 CHURC1Q8WUH1 139 aa16.7■□□□□ 0.26
SLIRP-210ENST00000557431 SCLYQ96I15 445 aa16.7■□□□□ 0.26
SLIRP-210ENST00000557431 HIPK3Q9H422 1215 aa16.7■□□□□ 0.26
SLIRP-210ENST00000557431 IL23AQ9NPF7 189 aa16.7■□□□□ 0.26
SLIRP-210ENST00000557431 CYP39A1Q9NYL5 469 aa16.7■□□□□ 0.26
SLIRP-210ENST00000557431 CCPG1Q9ULG6 757 aa16.7■□□□□ 0.26
SLIRP-210ENST00000557431 YBX2Q9Y2T7 364 aaKnown RBP16.7■□□□□ 0.26
SLIRP-210ENST00000557431 TTC28Q96AY4 2481 aa16.7■□□□□ 0.26
SLIRP-210ENST00000557431 FRMPD2Q68DX3 1309 aaPredicted RBP16.7■□□□□ 0.26
SLIRP-210ENST00000557431 PRRC2BQ5JSZ5 2229 aaKnown RBP16.69■□□□□ 0.26
SLIRP-210ENST00000557431 ASB14A6NK59 587 aa16.69■□□□□ 0.26
SLIRP-210ENST00000557431 RANBP6O60518 1105 aaKnown RBP16.69■□□□□ 0.26
SLIRP-210ENST00000557431 SLC3A2P08195 630 aaKnown RBP16.69■□□□□ 0.26
SLIRP-210ENST00000557431 RABGGTBP53611 331 aa16.69■□□□□ 0.26
SLIRP-210ENST00000557431 RCSD1Q6JBY9 416 aa16.69■□□□□ 0.26
SLIRP-210ENST00000557431 PSRC1Q6PGN9 363 aaPredicted RBP16.69■□□□□ 0.26
SLIRP-210ENST00000557431 SLC43A3Q8NBI5 491 aa16.69■□□□□ 0.26
SLIRP-210ENST00000557431 GAS2L1Q99501 681 aaPredicted RBP16.69■□□□□ 0.26
SLIRP-210ENST00000557431 AP5M1Q9H0R1 490 aa16.69■□□□□ 0.26
SLIRP-210ENST00000557431 WNT8AQ9H1J5 351 aa16.69■□□□□ 0.26
SLIRP-210ENST00000557431 SYNPO2Q9UMS6 1093 aa16.69■□□□□ 0.26
SLIRP-210ENST00000557431 NFIBO00712 420 aa16.68■□□□□ 0.26
SLIRP-210ENST00000557431 ERC2O15083 957 aa16.68■□□□□ 0.26
SLIRP-210ENST00000557431 MYOGP15173 224 aa16.68■□□□□ 0.26
SLIRP-210ENST00000557431 MX1P20591 662 aa16.68■□□□□ 0.26
SLIRP-210ENST00000557431 NKX3-2P78367 333 aa16.68■□□□□ 0.26
SLIRP-210ENST00000557431 RRP12Q5JTH9 1297 aaKnown RBP16.68■□□□□ 0.26
SLIRP-210ENST00000557431 KIAA1211Q6ZU35 1233 aa16.68■□□□□ 0.26
SLIRP-210ENST00000557431 GPCPD1Q9NPB8 672 aa16.68■□□□□ 0.26
SLIRP-210ENST00000557431 TOMM22Q9NS69 142 aa16.68■□□□□ 0.26
SLIRP-210ENST00000557431 COL4A4P53420 1690 aaPredicted RBP16.68■□□□□ 0.26
SLIRP-210ENST00000557431 FDX1P10109 184 aa16.67■□□□□ 0.26
SLIRP-210ENST00000557431 IGFBP4P22692 258 aa16.67■□□□□ 0.26
SLIRP-210ENST00000557431 BAATQ14032 418 aaPredicted RBP16.67■□□□□ 0.26
SLIRP-210ENST00000557431 LRRFIP1Q32MZ4 808 aaKnown RBP16.67■□□□□ 0.26
SLIRP-210ENST00000557431 TKFCQ3LXA3 575 aa16.67■□□□□ 0.26
SLIRP-210ENST00000557431 HERVK_113Q902F9 699 aa16.67■□□□□ 0.26
SLIRP-210ENST00000557431 VWCEQ96DN2 955 aa16.67■□□□□ 0.26
SLIRP-210ENST00000557431 NOC4LQ9BVI4 516 aaKnown RBP16.67■□□□□ 0.26
SLIRP-210ENST00000557431 SALL3Q9BXA9 1300 aa16.67■□□□□ 0.26
SLIRP-210ENST00000557431 FGBP02675 491 aa16.66■□□□□ 0.26
SLIRP-210ENST00000557431 CYP2C9P11712 490 aa16.66■□□□□ 0.26
SLIRP-210ENST00000557431 ALDH5A1P51649 535 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms