RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 ZBBXA8MT70 800 aa14.57□□□□□ -0.08
RTN1-208ENST00000557422 DYNC1LI2O43237 492 aaPredicted RBP14.57□□□□□ -0.08
RTN1-208ENST00000557422 SMPD1P17405 629 aa14.57□□□□□ -0.08
RTN1-208ENST00000557422 PSMC6P62333 389 aa14.57□□□□□ -0.08
RTN1-208ENST00000557422 TTLL4Q14679 1199 aa14.57□□□□□ -0.08
RTN1-208ENST00000557422 MKL1Q969V6 931 aa14.57□□□□□ -0.08
RTN1-208ENST00000557422 ASB14A6NK59 587 aa14.56□□□□□ -0.08
RTN1-208ENST00000557422 GTPBP6O43824 516 aaPredicted RBP14.56□□□□□ -0.08
RTN1-208ENST00000557422 TLL1O43897 1013 aa14.56□□□□□ -0.08
RTN1-208ENST00000557422 ZEB2O60315 1214 aa14.56□□□□□ -0.08
RTN1-208ENST00000557422 CA3P07451 260 aa14.56□□□□□ -0.08
RTN1-208ENST00000557422 TMEM67Q5HYA8 995 aa14.56□□□□□ -0.08
RTN1-208ENST00000557422 STRBPQ96SI9 672 aaKnown RBP14.56□□□□□ -0.08
RTN1-208ENST00000557422 ACAD9Q9H845 621 aa14.56□□□□□ -0.08
RTN1-208ENST00000557422 CERS4Q9HA82 394 aa14.56□□□□□ -0.08
RTN1-208ENST00000557422 A1CFQ9NQ94 594 aaKnown RBP14.56□□□□□ -0.08
RTN1-208ENST00000557422 PDGFCQ9NRA1 345 aa14.56□□□□□ -0.08
RTN1-208ENST00000557422 COG5Q9UP83 839 aa14.56□□□□□ -0.08
RTN1-208ENST00000557422 HCN4Q9Y3Q4 1203 aa14.56□□□□□ -0.08
RTN1-208ENST00000557422 DDX49Q9Y6V7 483 aaKnown RBP14.56□□□□□ -0.08
RTN1-208ENST00000557422 MYH7P12883 1935 aa14.56□□□□□ -0.08
RTN1-208ENST00000557422 MYH4Q9Y623 1939 aa14.56□□□□□ -0.08
RTN1-208ENST00000557422 EPOPA6NHQ4 379 aa14.55□□□□□ -0.08
RTN1-208ENST00000557422 GSG1L2A8MUP6 293 aa14.55□□□□□ -0.08
RTN1-208ENST00000557422 MINDY4BA8MYZ0 360 aa14.55□□□□□ -0.08
RTN1-208ENST00000557422 PFKMP08237 780 aa14.55□□□□□ -0.08
RTN1-208ENST00000557422 FDX1P10109 184 aa14.55□□□□□ -0.08
RTN1-208ENST00000557422 TMEM31Q5JXX7 168 aa14.55□□□□□ -0.08
RTN1-208ENST00000557422 TMEM63BQ5T3F8 832 aa14.55□□□□□ -0.08
RTN1-208ENST00000557422 KRT40Q6A162 431 aa14.55□□□□□ -0.08
RTN1-208ENST00000557422 IQSEC1Q6DN90 963 aa14.55□□□□□ -0.08
RTN1-208ENST00000557422 ZSCAN25Q6NSZ9 544 aa14.55□□□□□ -0.08
RTN1-208ENST00000557422 TAPT1Q6NXT6 567 aa14.55□□□□□ -0.08
RTN1-208ENST00000557422 PANK1Q8TE04 598 aa14.55□□□□□ -0.08
RTN1-208ENST00000557422 CEP95Q96GE4 821 aa14.55□□□□□ -0.08
RTN1-208ENST00000557422 ALDH8A1Q9H2A2 487 aaPredicted RBP14.55□□□□□ -0.08
RTN1-208ENST00000557422 MTMR4Q9NYA4 1195 aa14.55□□□□□ -0.08
RTN1-208ENST00000557422 Q9Y3F1 56 aa14.55□□□□□ -0.08
RTN1-208ENST00000557422 PIEZO1Q92508 2521 aa14.55□□□□□ -0.08
RTN1-208ENST00000557422 RAB11FIP3O75154 756 aa14.54□□□□□ -0.08
RTN1-208ENST00000557422 BMP3P12645 472 aa14.54□□□□□ -0.08
RTN1-208ENST00000557422 GIMAP6Q6P9H5 292 aa14.54□□□□□ -0.08
RTN1-208ENST00000557422 DEFB128Q7Z7B8 93 aa14.54□□□□□ -0.08
RTN1-208ENST00000557422 SIRT2Q8IXJ6 389 aa14.54□□□□□ -0.08
RTN1-208ENST00000557422 RPAP2Q8IXW5 612 aaPredicted RBP14.54□□□□□ -0.08
RTN1-208ENST00000557422 LRRC47Q8N1G4 583 aaKnown RBP14.54□□□□□ -0.08
RTN1-208ENST00000557422 GMCL1P1Q8NEA9 526 aa14.54□□□□□ -0.08
RTN1-208ENST00000557422 RNF146Q9NTX7 359 aa14.54□□□□□ -0.08
RTN1-208ENST00000557422 SYNPO2Q9UMS6 1093 aa14.54□□□□□ -0.08
RTN1-208ENST00000557422 COG6Q9Y2V7 657 aa14.54□□□□□ -0.08
RTN1-208ENST00000557422 ZNF536O15090 1300 aa14.54□□□□□ -0.08
RTN1-208ENST00000557422 TMEM232C9JQI7 657 aa14.53□□□□□ -0.08
RTN1-208ENST00000557422 CCER2I3L3R5 266 aa14.53□□□□□ -0.08
RTN1-208ENST00000557422 TTLL1O95922 423 aa14.53□□□□□ -0.08
RTN1-208ENST00000557422 SUPT20HL2P0C7V6 817 aa14.53□□□□□ -0.08
RTN1-208ENST00000557422 CYP2C9P11712 490 aa14.53□□□□□ -0.08
RTN1-208ENST00000557422 TAP1Q03518 808 aa14.53□□□□□ -0.08
RTN1-208ENST00000557422 SLFN13Q68D06 897 aa14.53□□□□□ -0.08
RTN1-208ENST00000557422 EEPD1Q7L9B9 569 aa14.53□□□□□ -0.08
RTN1-208ENST00000557422 ZNF444Q8N0Y2 327 aaPredicted RBP14.53□□□□□ -0.08
RTN1-208ENST00000557422 KHSRPQ92945 711 aaKnown RBP eCLIP14.53□□□□□ -0.08
RTN1-208ENST00000557422 TRERF1Q96PN7 1200 aa14.53□□□□□ -0.08
RTN1-208ENST00000557422 TRMT13Q9NUP7 481 aaKnown RBP14.53□□□□□ -0.08
RTN1-208ENST00000557422 SCN5AQ14524 2016 aa14.53□□□□□ -0.08
RTN1-208ENST00000557422 LRRC37A2A6NM11 1700 aa14.52□□□□□ -0.08
RTN1-208ENST00000557422 MUC6Q6W4X9 2439 aa14.52□□□□□ -0.08
RTN1-208ENST00000557422 TNKSO95271 1327 aa14.52□□□□□ -0.08
RTN1-208ENST00000557422 GPR37L1O60883 481 aa14.52□□□□□ -0.09
RTN1-208ENST00000557422 HMMRO75330 724 aa14.52□□□□□ -0.09
RTN1-208ENST00000557422 PRDM1O75626 825 aa14.52□□□□□ -0.09
RTN1-208ENST00000557422 ARHGEF15O94989 841 aa14.52□□□□□ -0.09
RTN1-208ENST00000557422 TKFCQ3LXA3 575 aa14.52□□□□□ -0.09
RTN1-208ENST00000557422 FBXO16Q8IX29 292 aaPredicted RBP14.52□□□□□ -0.09
RTN1-208ENST00000557422 PHOSPHO2Q8TCD6 241 aa14.52□□□□□ -0.09
RTN1-208ENST00000557422 CHURC1Q8WUH1 139 aa14.52□□□□□ -0.09
RTN1-208ENST00000557422 ARNTL2Q8WYA1 636 aa14.52□□□□□ -0.09
RTN1-208ENST00000557422 HLA-CQ95604 372 aa14.52□□□□□ -0.09
RTN1-208ENST00000557422 C11orf16Q9NQ32 467 aa14.52□□□□□ -0.09
RTN1-208ENST00000557422 BRWD1Q9NSI6 2320 aa14.51□□□□□ -0.09
RTN1-208ENST00000557422 ACTN1P12814 892 aa14.51□□□□□ -0.09
RTN1-208ENST00000557422 ALAS1P13196 640 aa14.51□□□□□ -0.09
RTN1-208ENST00000557422 STAT2P52630 851 aa14.51□□□□□ -0.09
RTN1-208ENST00000557422 MUM1L1Q5H9M0 696 aa14.51□□□□□ -0.09
RTN1-208ENST00000557422 KIAA1211Q6ZU35 1233 aa14.51□□□□□ -0.09
RTN1-208ENST00000557422 FAM160B2Q86V87 743 aa14.51□□□□□ -0.09
RTN1-208ENST00000557422 MORC4Q8TE76 937 aa14.51□□□□□ -0.09
RTN1-208ENST00000557422 STAG1Q8WVM7 1258 aa14.51□□□□□ -0.09
RTN1-208ENST00000557422 SLC9A7Q96T83 725 aa14.51□□□□□ -0.09
RTN1-208ENST00000557422 ZNF287Q9HBT7 754 aa14.51□□□□□ -0.09
RTN1-208ENST00000557422 EPB41L4AQ9HCS5 686 aaPredicted RBP14.51□□□□□ -0.09
RTN1-208ENST00000557422 VTA1Q9NP79 307 aa14.51□□□□□ -0.09
RTN1-208ENST00000557422 CYP39A1Q9NYL5 469 aa14.51□□□□□ -0.09
RTN1-208ENST00000557422 ISY1Q9ULR0 285 aaKnown RBP14.51□□□□□ -0.09
RTN1-208ENST00000557422 RFC2P35250 354 aa14.5□□□□□ -0.09
RTN1-208ENST00000557422 PURAQ00577 322 aaKnown RBP14.5□□□□□ -0.09
RTN1-208ENST00000557422 GRB10Q13322 594 aa14.5□□□□□ -0.09
RTN1-208ENST00000557422 DUSP28Q4G0W2 176 aa14.5□□□□□ -0.09
RTN1-208ENST00000557422 HERC6Q8IVU3 1022 aa14.5□□□□□ -0.09
RTN1-208ENST00000557422 NEDD1Q8NHV4 660 aa14.5□□□□□ -0.09
RTN1-208ENST00000557422 OSBP2Q969R2 916 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms