RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 SYNE3Q6ZMZ3 975 aa19.45■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 MICU3Q86XE3 530 aa19.45■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 HOMER1Q86YM7 354 aa19.45■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 TINF2Q9BSI4 451 aa19.45■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 PTPDC1A2A3K4 754 aa19.44■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 RXRAP19793 462 aa19.44■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 PSMA5P28066 241 aa19.44■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 EXOSC10Q01780 885 aaKnown RBP19.44■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 FBXO11Q86XK2 927 aa19.44■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 RAB11FIP4Q86YS3 637 aa19.44■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 CCDC144CPQ8IYA2 1237 aa19.44■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 MAP3K14Q99558 947 aa19.44■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 USP26Q9BXU7 913 aa19.44■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 CYP39A1Q9NYL5 469 aa19.44■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 CNPY2Q9Y2B0 182 aa19.44■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 ABCB11O95342 1321 aa19.44■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 ZBTB5O15062 677 aa19.43■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 EIF5BO60841 1220 aaKnown RBP19.43■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 IGHA2P01877 340 aa19.43■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 CPA1P15085 419 aa19.43■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 CASTP20810 708 aaKnown RBP19.43■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 CNTN2Q02246 1040 aa19.43■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 ZNF467Q7Z7K2 595 aaPredicted RBP19.43■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 SGMS1Q86VZ5 419 aa19.43■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 MSL3Q8N5Y2 521 aaKnown RBP19.43■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 AMNQ9BXJ7 453 aa19.43■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 MSCO60682 206 aa19.42■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 GNAQP50148 359 aa19.42■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 APOA5Q6Q788 366 aa19.42■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 SLC30A10Q6XR72 485 aa19.42■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 RNF207Q6ZRF8 634 aa19.42■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 FAM133AQ8N9E0 248 aa19.42■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 TRPV1Q8NER1 839 aa19.42■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 CLEC4DQ8WXI8 215 aa19.42■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 PIGSQ96S52 555 aa19.42■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 DDX20Q9UHI6 824 aaKnown RBP19.42■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 NAP1L2Q9ULW6 460 aaPredicted RBP19.42■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 SYNGAP1Q96PV0 1343 aa19.42■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 MYH6P13533 1939 aa19.41■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 FARP2O94887 1054 aaPredicted RBP19.41■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 CAPN2P17655 700 aa19.41■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 RPS6KB1P23443 525 aa19.41■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 CALML3P27482 149 aa19.41■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 BAATQ14032 418 aaPredicted RBP19.41■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 PRAMEF19Q5SWL8 479 aa19.41■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 PIBF1Q8WXW3 757 aa19.41■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 FGD4Q96M96 766 aa19.41■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 LZTS2Q9BRK4 669 aa19.41■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 CRISPLD2Q9H0B8 497 aa19.41■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 RIOX1Q9H6W3 641 aa19.41■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 NRBP1Q9UHY1 535 aa19.41■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 ZHX1Q9UKY1 873 aaPredicted RBP19.41■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 MRPL11Q9Y3B7 192 aaKnown RBP19.41■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 BRCA2P51587 3418 aa19.41■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 KLF18A0A0U1RQI7 1052 aa19.4■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 SEPT4O43236 478 aa19.4■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 CYTH3O43739 400 aa19.4■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 PLEKHA8P1O95397 391 aa19.4■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 TRAF1Q13077 416 aa19.4■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 SLC35G1Q2M3R5 365 aa19.4■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 MAMDC4Q6UXC1 1216 aa19.4■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 Q6ZUG5 572 aa19.4■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 ARMCX2Q7L311 632 aa19.4■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 MTMR8Q96EF0 704 aa19.4■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 SPZ1Q9BXG8 430 aa19.4■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 ADD3Q9UEY8 706 aaKnown RBP19.4■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 SEC63Q9UGP8 760 aaKnown RBP19.4■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 SMCHD1A6NHR9 2005 aa19.39■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 SOWAHBA6NEL2 793 aa19.39■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 ASB14A6NK59 587 aa19.39■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 ZBTB43O43298 467 aa19.39■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 RPS6P62753 249 aaKnown RBP19.39■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 MCF2L2Q86YR7 1114 aa19.39■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 FANCBQ8NB91 859 aa19.39■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 BRF1Q92994 677 aa19.39■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 RRP36Q96EU6 259 aaKnown RBP19.39■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.39■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 OGDHLQ9ULD0 1010 aa19.39■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 BRPF3Q9ULD4 1205 aa19.39■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 PCDHA1Q9Y5I3 950 aa19.39■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 FRMPD3Q5JV73 1810 aa19.39■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 PNMA6FA0A0J9YX94 578 aa19.38■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 GOLGA8AA7E2F4 631 aa19.38■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 GOLGA8BA8MQT2 603 aa19.38■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 PPP1R11O60927 126 aaPredicted RBP19.38■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 RTN1Q16799 776 aa19.38■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 ANO1Q5XXA6 986 aa19.38■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 CMTR1Q8N1G2 835 aaKnown RBP19.38■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 ANKLE1Q8NAG6 615 aa19.38■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 PURBQ96QR8 312 aaKnown RBP19.38■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 RBM28Q9NW13 759 aaKnown RBP19.38■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 CYP46A1Q9Y6A2 500 aa19.38■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 ASTN1O14525 1302 aa19.37■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 SNAI1O95863 264 aaPredicted RBP19.37■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 AKR1A1P14550 325 aa19.37■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 SMARCA1P28370 1054 aa19.37■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 APOBRQ0VD83 1088 aa19.37■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 LHX8Q68G74 356 aa19.37■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 TMTC3Q6ZXV5 915 aa19.37■□□□□ 0.69
TVP23C-CDRT4-204ENST00000557349 RUFY3Q7L099 469 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms