RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 WTIPA6NIX2 430 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-246ENST00000557030 ITGA4P13612 1032 aa6.63□□□□□ -1.35
ATXN3-246ENST00000557030 CFPP27918 469 aa6.63□□□□□ -1.35
ATXN3-246ENST00000557030 YBX1P67809 324 aaKnown RBP6.63□□□□□ -1.35
ATXN3-246ENST00000557030 SLC7A5Q01650 507 aa6.63□□□□□ -1.35
ATXN3-246ENST00000557030 GNL2Q13823 731 aaKnown RBP6.63□□□□□ -1.35
ATXN3-246ENST00000557030 SLC14A2Q15849 920 aa6.63□□□□□ -1.35
ATXN3-246ENST00000557030 PPP2R5EQ16537 467 aa6.63□□□□□ -1.35
ATXN3-246ENST00000557030 GNPTABQ3T906 1256 aa6.63□□□□□ -1.35
ATXN3-246ENST00000557030 NOL9Q5SY16 702 aaKnown RBP6.63□□□□□ -1.35
ATXN3-246ENST00000557030 GALNT18Q6P9A2 607 aa6.63□□□□□ -1.35
ATXN3-246ENST00000557030 VPS37DQ86XT2 251 aa6.63□□□□□ -1.35
ATXN3-246ENST00000557030 ANAPC16Q96DE5 110 aa6.63□□□□□ -1.35
ATXN3-246ENST00000557030 JMJD8Q96S16 334 aa6.63□□□□□ -1.35
ATXN3-246ENST00000557030 TINF2Q9BSI4 451 aa6.63□□□□□ -1.35
ATXN3-246ENST00000557030 MCMBPQ9BTE3 642 aa6.63□□□□□ -1.35
ATXN3-246ENST00000557030 CDADC1Q9BWV3 514 aa6.63□□□□□ -1.35
ATXN3-246ENST00000557030 MRVI1Q9Y6F6 885 aa6.63□□□□□ -1.35
ATXN3-246ENST00000557030 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
ATXN3-246ENST00000557030 TEX51A0A1B0GUA7 166 aa6.62□□□□□ -1.35
ATXN3-246ENST00000557030 EPHX1P07099 455 aa6.62□□□□□ -1.35
ATXN3-246ENST00000557030 DNAJA1P31689 397 aaKnown RBP6.62□□□□□ -1.35
ATXN3-246ENST00000557030 TCEAL1Q15170 157 aa6.62□□□□□ -1.35
ATXN3-246ENST00000557030 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
ATXN3-246ENST00000557030 CYB5RLQ6IPT4 315 aa6.62□□□□□ -1.35
ATXN3-246ENST00000557030 SIRT2Q8IXJ6 389 aa6.62□□□□□ -1.35
ATXN3-246ENST00000557030 ARHGEF39Q8N4T4 335 aa6.62□□□□□ -1.35
ATXN3-246ENST00000557030 RCC1LQ96I51 464 aaKnown RBP6.62□□□□□ -1.35
ATXN3-246ENST00000557030 NOL6Q9H6R4 1146 aaKnown RBP6.62□□□□□ -1.35
ATXN3-246ENST00000557030 SF3B6Q9Y3B4 125 aaKnown RBP6.62□□□□□ -1.35
ATXN3-246ENST00000557030 DNMBPQ6XZF7 1577 aa6.61□□□□□ -1.35
ATXN3-246ENST00000557030 OR14I1A6ND48 311 aa6.61□□□□□ -1.35
ATXN3-246ENST00000557030 SEMA7AO75326 666 aa6.61□□□□□ -1.35
ATXN3-246ENST00000557030 SSBP05455 408 aaKnown RBP eCLIP6.61□□□□□ -1.35
ATXN3-246ENST00000557030 GSTM1P09488 218 aa6.61□□□□□ -1.35
ATXN3-246ENST00000557030 CWF19L1Q69YN2 538 aaKnown RBP6.61□□□□□ -1.35
ATXN3-246ENST00000557030 SPOCD1Q6ZMY3 1216 aa6.61□□□□□ -1.35
ATXN3-246ENST00000557030 ZNF605Q86T29 641 aa6.61□□□□□ -1.35
ATXN3-246ENST00000557030 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.61□□□□□ -1.35
ATXN3-246ENST00000557030 TNFRSF12AQ9NP84 129 aa6.61□□□□□ -1.35
ATXN3-246ENST00000557030 ARHGEF11O15085 1522 aa6.6□□□□□ -1.35
ATXN3-246ENST00000557030 TOPBP1Q92547 1522 aa6.6□□□□□ -1.35
ATXN3-246ENST00000557030 ARHGAP35Q9NRY4 1499 aa6.6□□□□□ -1.35
ATXN3-246ENST00000557030 NFIBO00712 420 aa6.6□□□□□ -1.35
ATXN3-246ENST00000557030 IFNGR1P15260 489 aa6.6□□□□□ -1.35
ATXN3-246ENST00000557030 NOP2P46087 812 aaKnown RBP6.6□□□□□ -1.35
ATXN3-246ENST00000557030 POU4F1Q01851 419 aa6.6□□□□□ -1.35
ATXN3-246ENST00000557030 MVKQ03426 396 aa6.6□□□□□ -1.35
ATXN3-246ENST00000557030 ADGRF1Q5T601 910 aa6.6□□□□□ -1.35
ATXN3-246ENST00000557030 HEATR6Q6AI08 1181 aaKnown RBP6.6□□□□□ -1.35
ATXN3-246ENST00000557030 ATG14Q6ZNE5 492 aa6.6□□□□□ -1.35
ATXN3-246ENST00000557030 NLGN2Q8NFZ4 835 aa6.6□□□□□ -1.35
ATXN3-246ENST00000557030 KCNN1Q92952 543 aa6.6□□□□□ -1.35
ATXN3-246ENST00000557030 SMG5Q9UPR3 1016 aaKnown RBP6.6□□□□□ -1.35
ATXN3-246ENST00000557030 CARMIL1Q5VZK9 1371 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 AURKAO14965 403 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 FGRP09769 529 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 TMEM253P0C7T8 217 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 PDE6BP35913 854 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 DLG4P78352 724 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 GRB10Q13322 594 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 LAPTM5Q13571 262 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 HLA-DQA1Q5Y7H0 255 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 RCSD1Q6JBY9 416 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 VHLLQ6RSH7 139 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 CYP2R1Q6VVX0 501 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 ANKLE2Q86XL3 938 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 PTCHD1Q96NR3 888 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 KLHL14Q9P2G3 628 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 IMPACTQ9P2X3 320 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 CGGBP1Q9UFW8 167 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-246ENST00000557030 MBD1Q9UIS9 605 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-246ENST00000557030 TAF6LQ9Y6J9 622 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 ABCA10Q8WWZ4 1543 aa6.59□□□□□ -1.35
ATXN3-246ENST00000557030 RAD54L2Q9Y4B4 1467 aa6.59□□□□□ -1.36
ATXN3-246ENST00000557030 MSL3P1P0C860 447 aa6.58□□□□□ -1.36
ATXN3-246ENST00000557030 PRKCAP17252 672 aa6.58□□□□□ -1.36
ATXN3-246ENST00000557030 ARID5AQ03989 594 aa6.58□□□□□ -1.36
ATXN3-246ENST00000557030 CBX2Q14781 532 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-246ENST00000557030 KCNA10Q16322 511 aa6.58□□□□□ -1.36
ATXN3-246ENST00000557030 KIAA1211LQ6NV74 962 aa6.58□□□□□ -1.36
ATXN3-246ENST00000557030 AMIGO3Q86WK7 504 aa6.58□□□□□ -1.36
ATXN3-246ENST00000557030 ADCY4Q8NFM4 1077 aa6.58□□□□□ -1.36
ATXN3-246ENST00000557030 FGD4Q96M96 766 aa6.58□□□□□ -1.36
ATXN3-246ENST00000557030 YTHDC1Q96MU7 727 aaKnown RBP6.58□□□□□ -1.36
ATXN3-246ENST00000557030 ZDHHC15Q96MV8 337 aa6.58□□□□□ -1.36
ATXN3-246ENST00000557030 TOX2Q96NM4 488 aa6.58□□□□□ -1.36
ATXN3-246ENST00000557030 GBP3Q9H0R5 595 aa6.58□□□□□ -1.36
ATXN3-246ENST00000557030 APEX2Q9UBZ4 518 aa6.58□□□□□ -1.36
ATXN3-246ENST00000557030 URB2Q14146 1524 aaKnown RBP6.58□□□□□ -1.36
ATXN3-246ENST00000557030 POLA1P09884 1462 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-246ENST00000557030 ANKRD34BA5PLL1 514 aa6.57□□□□□ -1.36
ATXN3-246ENST00000557030 SMAD7O15105 426 aaKnown RBP6.57□□□□□ -1.36
ATXN3-246ENST00000557030 PPM1BO75688 479 aa6.57□□□□□ -1.36
ATXN3-246ENST00000557030 CD3EP07766 207 aa6.57□□□□□ -1.36
ATXN3-246ENST00000557030 SDHBP21912 280 aa6.57□□□□□ -1.36
ATXN3-246ENST00000557030 VIPR1P32241 457 aa6.57□□□□□ -1.36
ATXN3-246ENST00000557030 ZNF143P52747 638 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-246ENST00000557030 CORO7P57737 925 aa6.57□□□□□ -1.36
ATXN3-246ENST00000557030 CYP4F8P98187 520 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms