RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 COA7Q96BR5 231 aa27.21■■□□□ 1.95
SIX4-203ENST00000556952 TANGO6Q9C0B7 1094 aa27.21■■□□□ 1.95
SIX4-203ENST00000556952 RLFQ13129 1914 aa27.2■■□□□ 1.94
SIX4-203ENST00000556952 RILPL1Q5EBL4 403 aa27.2■■□□□ 1.94
SIX4-203ENST00000556952 GLT8D2Q9H1C3 349 aa27.2■■□□□ 1.94
SIX4-203ENST00000556952 LMBRD1Q9NUN5 540 aa27.2■■□□□ 1.94
SIX4-203ENST00000556952 POLR3EQ9NVU0 708 aa27.2■■□□□ 1.94
SIX4-203ENST00000556952 M0R2N6 131 aa27.19■■□□□ 1.94
SIX4-203ENST00000556952 GADL1Q6ZQY3 521 aa27.19■■□□□ 1.94
SIX4-203ENST00000556952 USP28Q96RU2 1077 aa27.19■■□□□ 1.94
SIX4-203ENST00000556952 GDPD2Q9HCC8 539 aa27.19■■□□□ 1.94
SIX4-203ENST00000556952 FBXO28Q9NVF7 368 aa27.19■■□□□ 1.94
SIX4-203ENST00000556952 SAGE1Q9NXZ1 904 aa27.19■■□□□ 1.94
SIX4-203ENST00000556952 TFIP11Q9UBB9 837 aaKnown RBP27.19■■□□□ 1.94
SIX4-203ENST00000556952 PCDHA1Q9Y5I3 950 aa27.19■■□□□ 1.94
SIX4-203ENST00000556952 PRPF40AO75400 957 aaKnown RBP27.18■■□□□ 1.94
SIX4-203ENST00000556952 FDX1P10109 184 aa27.18■■□□□ 1.94
SIX4-203ENST00000556952 ADCY7P51828 1080 aa27.18■■□□□ 1.94
SIX4-203ENST00000556952 GPAT2Q6NUI2 795 aa27.18■■□□□ 1.94
SIX4-203ENST00000556952 SPATA32Q96LK8 384 aa27.18■■□□□ 1.94
SIX4-203ENST00000556952 R3HDMLQ9H3Y0 253 aa27.18■■□□□ 1.94
SIX4-203ENST00000556952 RTEL1Q9NZ71 1219 aa27.18■■□□□ 1.94
SIX4-203ENST00000556952 PPP1R9AQ9ULJ8 1098 aa27.18■■□□□ 1.94
SIX4-203ENST00000556952 CA12O43570 354 aa27.18■■□□□ 1.94
SIX4-203ENST00000556952 FLOT1O75955 427 aa27.18■■□□□ 1.94
SIX4-203ENST00000556952 TBC1D8O95759 1140 aa27.18■■□□□ 1.94
SIX4-203ENST00000556952 HSPA8P11142 646 aaKnown RBP27.18■■□□□ 1.94
SIX4-203ENST00000556952 LEO1Q8WVC0 666 aaPredicted RBP27.18■■□□□ 1.94
SIX4-203ENST00000556952 RIC8AQ9NPQ8 531 aa27.18■■□□□ 1.94
SIX4-203ENST00000556952 NOL7Q9UMY1 257 aaKnown RBP27.18■■□□□ 1.94
SIX4-203ENST00000556952 YEATS4O95619 227 aa27.17■■□□□ 1.94
SIX4-203ENST00000556952 NBR1Q14596 966 aa27.17■■□□□ 1.94
SIX4-203ENST00000556952 TEX2Q8IWB9 1127 aa27.17■■□□□ 1.94
SIX4-203ENST00000556952 CUL5Q93034 780 aa27.17■■□□□ 1.94
SIX4-203ENST00000556952 NASPP49321 788 aaPredicted RBP27.16■■□□□ 1.94
SIX4-203ENST00000556952 SNAP25P60880 206 aa27.16■■□□□ 1.94
SIX4-203ENST00000556952 TREML2Q5T2D2 321 aa27.16■■□□□ 1.94
SIX4-203ENST00000556952 ANKRD23Q86SG2 305 aa27.16■■□□□ 1.94
SIX4-203ENST00000556952 REXO1Q8N1G1 1221 aaKnown RBP27.16■■□□□ 1.94
SIX4-203ENST00000556952 PROCA1Q8NCQ7 364 aaPredicted RBP27.16■■□□□ 1.94
SIX4-203ENST00000556952 PCDHA6Q9UN73 950 aa27.16■■□□□ 1.94
SIX4-203ENST00000556952 PCDHA8Q9Y5H6 950 aa27.16■■□□□ 1.94
SIX4-203ENST00000556952 MYPNQ86TC9 1320 aa27.16■■□□□ 1.94
SIX4-203ENST00000556952 CASP8AP2Q9UKL3 1982 aa27.15■■□□□ 1.94
SIX4-203ENST00000556952 ALDH1A1P00352 501 aa27.15■■□□□ 1.94
SIX4-203ENST00000556952 TRAPPC10P48553 1259 aa27.15■■□□□ 1.94
SIX4-203ENST00000556952 MRPL12P52815 198 aaKnown RBP27.15■■□□□ 1.94
SIX4-203ENST00000556952 ANO1Q5XXA6 986 aa27.15■■□□□ 1.94
SIX4-203ENST00000556952 FASTKD5Q7L8L6 764 aaKnown RBP27.15■■□□□ 1.94
SIX4-203ENST00000556952 RCOR1Q9UKL0 485 aa27.15■■□□□ 1.94
SIX4-203ENST00000556952 PNMA2Q9UL42 364 aa27.15■■□□□ 1.94
SIX4-203ENST00000556952 COL11A1P12107 1806 aaPredicted RBP27.15■■□□□ 1.94
SIX4-203ENST00000556952 RBBP6Q7Z6E9 1792 aaKnown RBP27.14■■□□□ 1.94
SIX4-203ENST00000556952 CCDC194A0A1B0GVG4 234 aa27.14■■□□□ 1.94
SIX4-203ENST00000556952 USP17L15C9J2P7 530 aa27.14■■□□□ 1.94
SIX4-203ENST00000556952 USP17L13C9JLJ4 530 aa27.14■■□□□ 1.94
SIX4-203ENST00000556952 USP17L11C9JVI0 530 aa27.14■■□□□ 1.94
SIX4-203ENST00000556952 USP17L18D6R9N7 530 aa27.14■■□□□ 1.94
SIX4-203ENST00000556952 USP17L22D6RA61 530 aa27.14■■□□□ 1.94
SIX4-203ENST00000556952 USP17L17D6RBQ6 530 aa27.14■■□□□ 1.94
SIX4-203ENST00000556952 USP17L19D6RCP7 530 aa27.14■■□□□ 1.94
SIX4-203ENST00000556952 USP17L20D6RJB6 530 aa27.14■■□□□ 1.94
SIX4-203ENST00000556952 PDHXO00330 501 aa27.14■■□□□ 1.94
SIX4-203ENST00000556952 USP17L24Q0WX57 530 aa27.14■■□□□ 1.94
SIX4-203ENST00000556952 CRHR2Q13324 411 aa27.14■■□□□ 1.94
SIX4-203ENST00000556952 SKOR2Q2VWA4 1001 aaPredicted RBP27.14■■□□□ 1.94
SIX4-203ENST00000556952 PIK3AP1Q6ZUJ8 805 aa27.14■■□□□ 1.94
SIX4-203ENST00000556952 KRT25Q7Z3Z0 450 aa27.14■■□□□ 1.94
SIX4-203ENST00000556952 FTOQ9C0B1 505 aaKnown RBP eCLIP27.14■■□□□ 1.94
SIX4-203ENST00000556952 CTCFP49711 727 aaPredicted RBP27.14■■□□□ 1.93
SIX4-203ENST00000556952 CEBPZQ03701 1054 aaKnown RBP27.14■■□□□ 1.93
SIX4-203ENST00000556952 TAF1CQ15572 869 aaPredicted RBP27.14■■□□□ 1.93
SIX4-203ENST00000556952 USH1GQ495M9 461 aa27.14■■□□□ 1.93
SIX4-203ENST00000556952 EARS2Q5JPH6 523 aaKnown RBP27.14■■□□□ 1.93
SIX4-203ENST00000556952 CATSPERGQ6ZRH7 1159 aa27.14■■□□□ 1.93
SIX4-203ENST00000556952 CFHR5Q9BXR6 569 aa27.14■■□□□ 1.93
SIX4-203ENST00000556952 PSTPIP2Q9H939 334 aa27.14■■□□□ 1.93
SIX4-203ENST00000556952 SLC38A10Q9HBR0 1119 aa27.14■■□□□ 1.93
SIX4-203ENST00000556952 CLIC4Q9Y696 253 aa27.14■■□□□ 1.93
SIX4-203ENST00000556952 ADAMTS3O15072 1205 aa27.13■■□□□ 1.93
SIX4-203ENST00000556952 ICAM1P05362 532 aa27.13■■□□□ 1.93
SIX4-203ENST00000556952 TOB1P50616 345 aaPredicted RBP27.13■■□□□ 1.93
SIX4-203ENST00000556952 LBX1P52954 281 aa27.13■■□□□ 1.93
SIX4-203ENST00000556952 CCDC174Q6PII3 467 aa27.13■■□□□ 1.93
SIX4-203ENST00000556952 LINC00301Q8NCQ3 95 aa27.13■■□□□ 1.93
SIX4-203ENST00000556952 KCNG4Q8TDN1 519 aa27.13■■□□□ 1.93
SIX4-203ENST00000556952 AGTPBP1Q9UPW5 1226 aa27.13■■□□□ 1.93
SIX4-203ENST00000556952 ABCB11O95342 1321 aa27.12■■□□□ 1.93
SIX4-203ENST00000556952 A0A0G2JMZ2 1700 aa27.12■■□□□ 1.93
SIX4-203ENST00000556952 UBE2HP62256 183 aa27.12■■□□□ 1.93
SIX4-203ENST00000556952 COG2Q14746 738 aa27.12■■□□□ 1.93
SIX4-203ENST00000556952 SAMD1Q6SPF0 538 aaPredicted RBP27.12■■□□□ 1.93
SIX4-203ENST00000556952 RASGRP4Q8TDF6 673 aa27.12■■□□□ 1.93
SIX4-203ENST00000556952 ZCCHC17Q9NP64 241 aaKnown RBP27.12■■□□□ 1.93
SIX4-203ENST00000556952 FAM205CA6NFA0 338 aa27.11■■□□□ 1.93
SIX4-203ENST00000556952 ZBED4O75132 1171 aa27.11■■□□□ 1.93
SIX4-203ENST00000556952 DSG3P32926 999 aa27.11■■□□□ 1.93
SIX4-203ENST00000556952 CLK2P49760 499 aaKnown RBP27.11■■□□□ 1.93
SIX4-203ENST00000556952 STK38Q15208 465 aa27.11■■□□□ 1.93
SIX4-203ENST00000556952 SF3A1Q15459 793 aaKnown RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms