RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 AGBL3Q8NEM8 1001 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 RHBDD1Q8TEB9 315 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 TBC1D22AQ8WUA7 517 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 RUFY2Q8WXA3 655 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 CCDC97Q96F63 343 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-244ENST00000556898 PRMT6Q96LA8 375 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-244ENST00000556898 C22orf23Q9BZE7 217 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 ZCCHC2Q9C0B9 1178 aaKnown RBP6.33□□□□□ -1.4
ATXN3-244ENST00000556898 CRISPLD1Q9H336 500 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 GGA3Q9NZ52 723 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 RBM8AQ9Y5S9 174 aaKnown RBP6.33□□□□□ -1.4
ATXN3-244ENST00000556898 TACC3Q9Y6A5 838 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 SLC4A4Q9Y6R1 1079 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 MAST2Q6P0Q8 1798 aa6.33□□□□□ -1.4
ATXN3-244ENST00000556898 GAKO14976 1311 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 ASTN2O75129 1339 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-244ENST00000556898 RAD50Q92878 1312 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 GPR75-ASB3A0A0A6YYF3 556 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 GSG1L2A8MUP6 293 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 APPP05067 770 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 CPA1P15085 419 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 ATP4AP20648 1035 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 AMPD1P23109 780 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 CHRNA4P43681 627 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 FXR1P51114 621 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATXN3-244ENST00000556898 RBM5P52756 815 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATXN3-244ENST00000556898 INHBEP58166 350 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 RHBDL3P58872 404 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 HAND2P61296 217 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 FKBP1AP62942 108 aaKnown RBP6.32□□□□□ -1.4
ATXN3-244ENST00000556898 SREBF2Q12772 1141 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 APOBEC3HQ6NTF7 200 aaKnown RBP6.32□□□□□ -1.4
ATXN3-244ENST00000556898 CDC42EP5Q6NZY7 148 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 KIAA1211Q6ZU35 1233 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 ALYREFQ86V81 257 aaKnown RBP6.32□□□□□ -1.4
ATXN3-244ENST00000556898 MAPKAPK5Q8IW41 473 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 ZFPM1Q8IX07 1006 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 IFNL3Q8IZI9 196 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 DEPDC4Q8N2C3 294 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 MAP4K1Q92918 833 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 KRTAP4-8Q9BYQ9 185 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 TDRD3Q9H7E2 651 aaKnown RBP6.32□□□□□ -1.4
ATXN3-244ENST00000556898 INCENPQ9NQS7 918 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 USP40Q9NVE5 1235 aa6.32□□□□□ -1.4
ATXN3-244ENST00000556898 PITPNM2Q9BZ72 1349 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 CLRN2A0PK11 232 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 PATL2C9JE40 543 aaKnown RBP6.31□□□□□ -1.4
ATXN3-244ENST00000556898 SLC27A2O14975 620 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 FGAP02671 866 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 LDHCP07864 332 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 HSPA4P34932 840 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 PLA2G4AP47712 749 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 DGKGP49619 791 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 GSTO1P78417 241 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 NFIAQ12857 509 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 PICALMQ13492 652 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 NECTIN1Q15223 517 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 TLR1Q15399 786 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 LRRFIP1Q32MZ4 808 aaKnown RBP6.31□□□□□ -1.4
ATXN3-244ENST00000556898 NBPF9Q3BBW0 867 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 ADCK5Q3MIX3 580 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 CREB3L3Q68CJ9 461 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 STOX1Q6ZVD7 989 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 MOB2Q70IA6 237 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 TEX11Q8IYF3 940 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 ZNF295-AS1Q8N0V1 137 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 TGFBRAP1Q8WUH2 860 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 TEKT1Q969V4 418 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 TBC1D32Q96NH3 1257 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 KIF2CQ99661 725 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 DDX4Q9NQI0 724 aaKnown RBP6.31□□□□□ -1.4
ATXN3-244ENST00000556898 SAP30BPQ9UHR5 308 aaKnown RBP6.31□□□□□ -1.4
ATXN3-244ENST00000556898 NOD1Q9Y239 953 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 SNX14Q9Y5W7 946 aa6.31□□□□□ -1.4
ATXN3-244ENST00000556898 TRPM7Q96QT4 1865 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 PSME4Q14997 1843 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 MINDY4BA8MYZ0 360 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 WDHD1O75717 1129 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-244ENST00000556898 REC8O95072 547 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 CYP21A2P08686 494 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 ARAFP10398 606 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 NF2P35240 595 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 USP5P45974 858 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 HHIPL2Q6UWX4 724 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 ARMC9Q7Z3E5 817 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 TRIM50Q86XT4 487 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 TBC1D10CQ8IV04 446 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 ZBED3Q96IU2 234 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-244ENST00000556898 ZDHHC15Q96MV8 337 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 NOL10Q9BSC4 688 aaKnown RBP6.3□□□□□ -1.4
ATXN3-244ENST00000556898 DSCC1Q9BVC3 393 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 R3HDMLQ9H3Y0 253 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 MYOZ2Q9NPC6 264 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 DCP1AQ9NPI6 582 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-244ENST00000556898 SUGT1Q9Y2Z0 365 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 RBM19Q9Y4C8 960 aaKnown RBP6.3□□□□□ -1.4
ATXN3-244ENST00000556898 TRIM17Q9Y577 477 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 PCDHGC4Q9Y5F7 938 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 PCDHGA11Q9Y5H2 935 aa6.3□□□□□ -1.4
ATXN3-244ENST00000556898 MYH7P12883 1935 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms