RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.23■□□□□ 0.83
CHGA-206ENST00000556876 FAM161BQ96MY7 647 aa20.23■□□□□ 0.83
CHGA-206ENST00000556876 MAF1Q9H063 256 aa20.23■□□□□ 0.83
CHGA-206ENST00000556876 KATNBL1Q9H079 304 aa20.23■□□□□ 0.83
CHGA-206ENST00000556876 MTIF3Q9H2K0 278 aaKnown RBP20.23■□□□□ 0.83
CHGA-206ENST00000556876 RNF41Q9H4P4 317 aaPredicted RBP20.23■□□□□ 0.83
CHGA-206ENST00000556876 VTA1Q9NP79 307 aa20.23■□□□□ 0.83
CHGA-206ENST00000556876 TOMM22Q9NS69 142 aa20.23■□□□□ 0.83
CHGA-206ENST00000556876 CCPG1Q9ULG6 757 aa20.23■□□□□ 0.83
CHGA-206ENST00000556876 SMCHD1A6NHR9 2005 aa20.22■□□□□ 0.83
CHGA-206ENST00000556876 B4DLN1 442 aa20.22■□□□□ 0.83
CHGA-206ENST00000556876 FGAP02671 866 aa20.22■□□□□ 0.83
CHGA-206ENST00000556876 MRPL12P52815 198 aaKnown RBP20.22■□□□□ 0.83
CHGA-206ENST00000556876 CCDC96Q2M329 555 aa20.22■□□□□ 0.83
CHGA-206ENST00000556876 CCDC178Q5BJE1 867 aa20.22■□□□□ 0.83
CHGA-206ENST00000556876 PSRC1Q6PGN9 363 aaPredicted RBP20.22■□□□□ 0.83
CHGA-206ENST00000556876 CYP39A1Q9NYL5 469 aa20.22■□□□□ 0.83
CHGA-206ENST00000556876 COL11A1P12107 1806 aaPredicted RBP20.22■□□□□ 0.83
CHGA-206ENST00000556876 SOWAHBA6NEL2 793 aa20.21■□□□□ 0.83
CHGA-206ENST00000556876 FSCN1Q16658 493 aaKnown RBP20.21■□□□□ 0.83
CHGA-206ENST00000556876 TLK2Q86UE8 772 aa20.21■□□□□ 0.83
CHGA-206ENST00000556876 RANBP17Q9H2T7 1088 aaKnown RBP20.21■□□□□ 0.83
CHGA-206ENST00000556876 GNEQ9Y223 722 aaKnown RBP20.21■□□□□ 0.83
CHGA-206ENST00000556876 MYADML2A6NDP7 307 aa20.2■□□□□ 0.82
CHGA-206ENST00000556876 FOXP2O15409 715 aa20.2■□□□□ 0.82
CHGA-206ENST00000556876 BRDTQ58F21 947 aaPredicted RBP20.2■□□□□ 0.82
CHGA-206ENST00000556876 SYDE2Q5VT97 1194 aa20.2■□□□□ 0.82
CHGA-206ENST00000556876 MFSD6Q6ZSS7 791 aa20.2■□□□□ 0.82
CHGA-206ENST00000556876 FAM126BQ8IXS8 530 aa20.2■□□□□ 0.82
CHGA-206ENST00000556876 MORC4Q8TE76 937 aa20.2■□□□□ 0.82
CHGA-206ENST00000556876 VPS53Q5VIR6 699 aa20.19■□□□□ 0.82
CHGA-206ENST00000556876 NSMFQ6X4W1 530 aa20.19■□□□□ 0.82
CHGA-206ENST00000556876 SLC43A3Q8NBI5 491 aa20.19■□□□□ 0.82
CHGA-206ENST00000556876 MAFAQ8NHW3 353 aaPredicted RBP20.19■□□□□ 0.82
CHGA-206ENST00000556876 RWDD1Q9H446 243 aaPredicted RBP20.19■□□□□ 0.82
CHGA-206ENST00000556876 CUL9Q8IWT3 2517 aa20.19■□□□□ 0.82
CHGA-206ENST00000556876 PLXNA1Q9UIW2 1896 aa20.18■□□□□ 0.82
CHGA-206ENST00000556876 TRIM6-TRIM34B2RNG4 842 aa20.18■□□□□ 0.82
CHGA-206ENST00000556876 DYNC1LI2O43237 492 aaPredicted RBP20.18■□□□□ 0.82
CHGA-206ENST00000556876 NMT2O60551 498 aa20.18■□□□□ 0.82
CHGA-206ENST00000556876 CD4P01730 458 aa20.18■□□□□ 0.82
CHGA-206ENST00000556876 HSPD1P10809 573 aaKnown RBP20.18■□□□□ 0.82
CHGA-206ENST00000556876 EPHB4P54760 987 aa20.18■□□□□ 0.82
CHGA-206ENST00000556876 ITGA7Q13683 1181 aa20.18■□□□□ 0.82
CHGA-206ENST00000556876 RRP12Q5JTH9 1297 aaKnown RBP20.18■□□□□ 0.82
CHGA-206ENST00000556876 GPATCH4Q5T3I0 446 aaKnown RBP20.18■□□□□ 0.82
CHGA-206ENST00000556876 TMEM47Q9BQJ4 181 aa20.18■□□□□ 0.82
CHGA-206ENST00000556876 LTBP2Q14767 1821 aa20.18■□□□□ 0.82
CHGA-206ENST00000556876 HIP1O00291 1037 aa20.17■□□□□ 0.82
CHGA-206ENST00000556876 CTAGE5O15320 804 aa20.17■□□□□ 0.82
CHGA-206ENST00000556876 ADCY6O43306 1168 aa20.17■□□□□ 0.82
CHGA-206ENST00000556876 SUPT20HL2P0C7V6 817 aa20.17■□□□□ 0.82
CHGA-206ENST00000556876 FOSL2P15408 326 aa20.17■□□□□ 0.82
CHGA-206ENST00000556876 DUSP28Q4G0W2 176 aa20.17■□□□□ 0.82
CHGA-206ENST00000556876 AKNAD1Q5T1N1 836 aa20.17■□□□□ 0.82
CHGA-206ENST00000556876 KIAA1211Q6ZU35 1233 aa20.17■□□□□ 0.82
CHGA-206ENST00000556876 RPUSD2Q8IZ73 545 aaKnown RBP20.17■□□□□ 0.82
CHGA-206ENST00000556876 ESR2Q92731 530 aa20.17■□□□□ 0.82
CHGA-206ENST00000556876 TTYH1Q9H313 450 aaPredicted RBP20.17■□□□□ 0.82
CHGA-206ENST00000556876 INCENPQ9NQS7 918 aa20.17■□□□□ 0.82
CHGA-206ENST00000556876 POLR3EQ9NVU0 708 aa20.17■□□□□ 0.82
CHGA-206ENST00000556876 NKRFO15226 690 aaKnown RBP eCLIP20.16■□□□□ 0.82
CHGA-206ENST00000556876 KPNA6O60684 536 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 SMPD1P17405 629 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 DNAJB2P25686 324 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 CPT1AP50416 773 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 BAATQ14032 418 aaPredicted RBP20.16■□□□□ 0.82
CHGA-206ENST00000556876 MUM1L1Q5H9M0 696 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 TMEM240Q5SV17 173 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 TAPT1Q6NXT6 567 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 CXCL17Q6UXB2 119 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 DGKHQ86XP1 1220 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 RGS22Q8NE09 1264 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 DNERQ8NFT8 737 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 TIFAQ96CG3 184 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 CRBNQ96SW2 442 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.16■□□□□ 0.82
CHGA-206ENST00000556876 IL23AQ9NPF7 189 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 MTMR7Q9Y216 660 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 CCDC171Q6TFL3 1326 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 WDR19Q8NEZ3 1342 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 RAD50Q92878 1312 aa20.16■□□□□ 0.82
CHGA-206ENST00000556876 MYH4Q9Y623 1939 aa20.15■□□□□ 0.82
CHGA-206ENST00000556876 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.15■□□□□ 0.82
CHGA-206ENST00000556876 ZNF213O14771 459 aa20.15■□□□□ 0.82
CHGA-206ENST00000556876 BEX3Q00994 111 aa20.15■□□□□ 0.82
CHGA-206ENST00000556876 SYMPKQ92797 1274 aaKnown RBP20.15■□□□□ 0.82
CHGA-206ENST00000556876 FAM227BQ96M60 508 aa20.15■□□□□ 0.82
CHGA-206ENST00000556876 HIPK3Q9H422 1215 aa20.15■□□□□ 0.82
CHGA-206ENST00000556876 GPHNQ9NQX3 736 aaPredicted RBP20.15■□□□□ 0.82
CHGA-206ENST00000556876 UNC80Q8N2C7 3258 aa20.14■□□□□ 0.82
CHGA-206ENST00000556876 PTPDC1A2A3K4 754 aa20.14■□□□□ 0.81
CHGA-206ENST00000556876 FGBP02675 491 aa20.14■□□□□ 0.81
CHGA-206ENST00000556876 PDHBP11177 359 aa20.14■□□□□ 0.81
CHGA-206ENST00000556876 CSF2RAP15509 400 aa20.14■□□□□ 0.81
CHGA-206ENST00000556876 SLC16A2P36021 539 aa20.14■□□□□ 0.81
CHGA-206ENST00000556876 RAB30Q15771 203 aa20.14■□□□□ 0.81
CHGA-206ENST00000556876 RASIP1Q5U651 963 aa20.14■□□□□ 0.81
CHGA-206ENST00000556876 RNF207Q6ZRF8 634 aa20.14■□□□□ 0.81
CHGA-206ENST00000556876 IQCA1Q86XH1 822 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms