RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 DHX16O60231 1041 aaKnown RBP26.63■■□□□ 1.85
TDP1-216ENST00000556867 MSCO60682 206 aa26.63■■□□□ 1.85
TDP1-216ENST00000556867 FARP2O94887 1054 aaPredicted RBP26.63■■□□□ 1.85
TDP1-216ENST00000556867 LHX8Q68G74 356 aa26.63■■□□□ 1.85
TDP1-216ENST00000556867 ANKLE1Q8NAG6 615 aa26.63■■□□□ 1.85
TDP1-216ENST00000556867 CLEC4DQ8WXI8 215 aa26.63■■□□□ 1.85
TDP1-216ENST00000556867 DDX20Q9UHI6 824 aaKnown RBP26.63■■□□□ 1.85
TDP1-216ENST00000556867 NFIBO00712 420 aa26.62■■□□□ 1.85
TDP1-216ENST00000556867 EXOSC10Q01780 885 aaKnown RBP26.62■■□□□ 1.85
TDP1-216ENST00000556867 CNTN2Q02246 1040 aa26.62■■□□□ 1.85
TDP1-216ENST00000556867 QRICH1Q2TAL8 776 aa26.62■■□□□ 1.85
TDP1-216ENST00000556867 NSMFQ6X4W1 530 aa26.62■■□□□ 1.85
TDP1-216ENST00000556867 DHX32Q7L7V1 743 aaKnown RBP26.62■■□□□ 1.85
TDP1-216ENST00000556867 MTMR8Q96EF0 704 aa26.62■■□□□ 1.85
TDP1-216ENST00000556867 LRRC2Q9BYS8 371 aa26.62■■□□□ 1.85
TDP1-216ENST00000556867 BAZ2BQ9UIF8 2168 aaKnown RBP26.61■■□□□ 1.85
TDP1-216ENST00000556867 CCDC69A6NI79 296 aa26.61■■□□□ 1.85
TDP1-216ENST00000556867 SEPT4O43236 478 aa26.61■■□□□ 1.85
TDP1-216ENST00000556867 HMGB1P09429 215 aaKnown RBP26.61■■□□□ 1.85
TDP1-216ENST00000556867 CNGA1P29973 690 aa26.61■■□□□ 1.85
TDP1-216ENST00000556867 SLC35G1Q2M3R5 365 aa26.61■■□□□ 1.85
TDP1-216ENST00000556867 PRAMEF19Q5SWL8 479 aa26.61■■□□□ 1.85
TDP1-216ENST00000556867 NFXL1Q6ZNB6 911 aa26.61■■□□□ 1.85
TDP1-216ENST00000556867 SGMS1Q86VZ5 419 aa26.61■■□□□ 1.85
TDP1-216ENST00000556867 VAT1LQ9HCJ6 419 aa26.61■■□□□ 1.85
TDP1-216ENST00000556867 SNX14Q9Y5W7 946 aa26.61■■□□□ 1.85
TDP1-216ENST00000556867 USH1GQ495M9 461 aa26.6■■□□□ 1.85
TDP1-216ENST00000556867 NUP133Q8WUM0 1156 aa26.6■■□□□ 1.85
TDP1-216ENST00000556867 MYL10Q9BUA6 226 aa26.6■■□□□ 1.85
TDP1-216ENST00000556867 RIOX1Q9H6W3 641 aa26.6■■□□□ 1.85
TDP1-216ENST00000556867 CNPY2Q9Y2B0 182 aa26.6■■□□□ 1.85
TDP1-216ENST00000556867 ABCB11O95342 1321 aa26.6■■□□□ 1.85
TDP1-216ENST00000556867 SOWAHBA6NEL2 793 aa26.59■■□□□ 1.85
TDP1-216ENST00000556867 SNAI1O95863 264 aaPredicted RBP26.59■■□□□ 1.85
TDP1-216ENST00000556867 KIF5BP33176 963 aa26.59■■□□□ 1.85
TDP1-216ENST00000556867 FBXO11Q86XK2 927 aa26.59■■□□□ 1.85
TDP1-216ENST00000556867 CTCFLQ8NI51 663 aaPredicted RBP26.59■■□□□ 1.85
TDP1-216ENST00000556867 ZBTB5O15062 677 aa26.58■■□□□ 1.85
TDP1-216ENST00000556867 CALM1P0DP23 149 aa26.58■■□□□ 1.85
TDP1-216ENST00000556867 CALM2P0DP24 149 aa26.58■■□□□ 1.85
TDP1-216ENST00000556867 CALM3P0DP25 149 aa26.58■■□□□ 1.85
TDP1-216ENST00000556867 BAATQ14032 418 aaPredicted RBP26.58■■□□□ 1.85
TDP1-216ENST00000556867 ARMCX2Q7L311 632 aa26.58■■□□□ 1.85
TDP1-216ENST00000556867 RGS22Q8NE09 1264 aa26.58■■□□□ 1.85
TDP1-216ENST00000556867 USP26Q9BXU7 913 aa26.58■■□□□ 1.85
TDP1-216ENST00000556867 MAF1Q9H063 256 aa26.58■■□□□ 1.85
TDP1-216ENST00000556867 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.58■■□□□ 1.85
TDP1-216ENST00000556867 SLC12A7Q9Y666 1083 aa26.58■■□□□ 1.85
TDP1-216ENST00000556867 ASTN1O14525 1302 aa26.58■■□□□ 1.85
TDP1-216ENST00000556867 LRRC37A2A6NM11 1700 aa26.57■■□□□ 1.84
TDP1-216ENST00000556867 CYTH3O43739 400 aa26.57■■□□□ 1.84
TDP1-216ENST00000556867 ZNF865P0CJ78 1059 aaPredicted RBP26.57■■□□□ 1.84
TDP1-216ENST00000556867 MNX1P50219 401 aaPredicted RBP26.57■■□□□ 1.84
TDP1-216ENST00000556867 SLC30A10Q6XR72 485 aa26.57■■□□□ 1.84
TDP1-216ENST00000556867 TCEANC2Q96MN5 208 aa26.57■■□□□ 1.84
TDP1-216ENST00000556867 JAKMIP1Q96N16 626 aaKnown RBP26.57■■□□□ 1.84
TDP1-216ENST00000556867 AMNQ9BXJ7 453 aa26.57■■□□□ 1.84
TDP1-216ENST00000556867 PTPDC1A2A3K4 754 aa26.56■■□□□ 1.84
TDP1-216ENST00000556867 RNF207Q6ZRF8 634 aa26.56■■□□□ 1.84
TDP1-216ENST00000556867 CCDC144CPQ8IYA2 1237 aa26.56■■□□□ 1.84
TDP1-216ENST00000556867 SPZ1Q9BXG8 430 aa26.56■■□□□ 1.84
TDP1-216ENST00000556867 ASB14A6NK59 587 aa26.55■■□□□ 1.84
TDP1-216ENST00000556867 PPP1R11O60927 126 aaPredicted RBP26.55■■□□□ 1.84
TDP1-216ENST00000556867 SMARCA1P28370 1054 aa26.55■■□□□ 1.84
TDP1-216ENST00000556867 GNAQP50148 359 aa26.55■■□□□ 1.84
TDP1-216ENST00000556867 RPS6P62753 249 aaKnown RBP26.55■■□□□ 1.84
TDP1-216ENST00000556867 DIS3LQ8TF46 1054 aaKnown RBP26.55■■□□□ 1.84
TDP1-216ENST00000556867 PAWRQ96IZ0 340 aaKnown RBP26.55■■□□□ 1.84
TDP1-216ENST00000556867 PIGSQ96S52 555 aa26.55■■□□□ 1.84
TDP1-216ENST00000556867 LZTS2Q9BRK4 669 aa26.55■■□□□ 1.84
TDP1-216ENST00000556867 ABHD16BQ9H3Z7 469 aa26.55■■□□□ 1.84
TDP1-216ENST00000556867 MRPL11Q9Y3B7 192 aaKnown RBP26.55■■□□□ 1.84
TDP1-216ENST00000556867 LOC102724159A0A0B4J2E5 919 aa26.54■■□□□ 1.84
TDP1-216ENST00000556867 AKR1A1P14550 325 aa26.54■■□□□ 1.84
TDP1-216ENST00000556867 PWP2Q15269 919 aaKnown RBP26.54■■□□□ 1.84
TDP1-216ENST00000556867 APOA5Q6Q788 366 aa26.54■■□□□ 1.84
TDP1-216ENST00000556867 BLOC1S2Q6QNY1 142 aa26.54■■□□□ 1.84
TDP1-216ENST00000556867 NECAB2Q7Z6G3 386 aa26.54■■□□□ 1.84
TDP1-216ENST00000556867 HOMER1Q86YM7 354 aa26.54■■□□□ 1.84
TDP1-216ENST00000556867 PURBQ96QR8 312 aaKnown RBP26.54■■□□□ 1.84
TDP1-216ENST00000556867 KATNBL1Q9H079 304 aa26.54■■□□□ 1.84
TDP1-216ENST00000556867 ADD3Q9UEY8 706 aaKnown RBP26.54■■□□□ 1.84
TDP1-216ENST00000556867 RXRAP19793 462 aa26.53■■□□□ 1.84
TDP1-216ENST00000556867 CALML3P27482 149 aa26.53■■□□□ 1.84
TDP1-216ENST00000556867 PSMA5P28066 241 aa26.53■■□□□ 1.84
TDP1-216ENST00000556867 TRAF1Q13077 416 aa26.53■■□□□ 1.84
TDP1-216ENST00000556867 ACVR2BQ13705 512 aa26.53■■□□□ 1.84
TDP1-216ENST00000556867 SYNE3Q6ZMZ3 975 aa26.53■■□□□ 1.84
TDP1-216ENST00000556867 MORC4Q8TE76 937 aa26.53■■□□□ 1.84
TDP1-216ENST00000556867 ZHX1Q9UKY1 873 aaPredicted RBP26.53■■□□□ 1.84
TDP1-216ENST00000556867 PNMA6FA0A0J9YX94 578 aa26.52■■□□□ 1.84
TDP1-216ENST00000556867 PLEKHA8P1O95397 391 aa26.52■■□□□ 1.84
TDP1-216ENST00000556867 CPA1P15085 419 aa26.52■■□□□ 1.84
TDP1-216ENST00000556867 ALDH5A1P51649 535 aaPredicted RBP26.52■■□□□ 1.84
TDP1-216ENST00000556867 ANO1Q5XXA6 986 aa26.52■■□□□ 1.84
TDP1-216ENST00000556867 MICU3Q86XE3 530 aa26.52■■□□□ 1.84
TDP1-216ENST00000556867 MCF2L2Q86YR7 1114 aa26.52■■□□□ 1.84
TDP1-216ENST00000556867 FANCBQ8NB91 859 aa26.52■■□□□ 1.84
TDP1-216ENST00000556867 HTATIP2Q9BUP3 242 aa26.52■■□□□ 1.84
TDP1-216ENST00000556867 BRPF3Q9ULD4 1205 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms