RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-222	ENST00000556778	CHURC1	Q8WUH1	139 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	PIBF1	Q8WXW3	757 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	USP6NL	Q92738	828 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	PURB	Q96QR8	312 aa	Known RBP	10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	JMJD4	Q9H9V9	463 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	PLSCR2	Q9NRY7	297 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	FLRT1	Q9NZU1	646 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	GREB1L	Q9C091	1923 aa	Predicted RBP	10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	ATAD5	Q96QE3	1844 aa		10.3	□□□□□ -0.76
PRKCH-222	ENST00000556778	LOC285556	D6RIA3	1793 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	KLRF2	D3W0D1	207 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	CYTH3	O43739	400 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	PLA2G6	O60733	806 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	CAST	P20810	708 aa	Known RBP	10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	RPS6KB1	P23443	525 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	MAPK4	P31152	587 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	NT5C2	P49902	561 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	APOBR	Q0VD83	1088 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	KRT32	Q14532	448 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	GRM4	Q14833	912 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	SART3	Q15020	963 aa	Known RBP	10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	MUM1L1	Q5H9M0	696 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	ZNF654	Q8IZM8	581 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	CCDC82	Q8N4S0	544 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	NPLOC4	Q8TAT6	608 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	RAET1E	Q8TD07	263 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	COA7	Q96BR5	231 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	TMEM87B	Q96K49	555 aa		10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	RANBP17	Q9H2T7	1088 aa	Known RBP	10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	DDX49	Q9Y6V7	483 aa	Known RBP	10.29	□□□□□ -0.76
PRKCH-222	ENST00000556778	hCG_1642624	A0A1W2PR95	340 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	CCDC69	A6NI79	296 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	CCDC85C	A6NKD9	419 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	ARHGAP33	O14559	1287 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	ATP2A1	O14983	1001 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	ADCY3	O60266	1144 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	PPP1R11	O60927	126 aa	Predicted RBP	10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	PPFIA3	O75145	1194 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	PLEKHA8P1	O95397	391 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	ALAS1	P13196	640 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	HOXD10	P28358	340 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	ADORA2A	P29274	412 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	LIFR	P42702	1097 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	PSEN2	P49810	448 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	CCNA1	P78396	465 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	MTFR1	Q15390	333 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	PKN2	Q16513	984 aa	Known RBP	10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	BLOC1S2	Q6QNY1	142 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	RUFY3	Q7L099	469 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	CATIP	Q7Z7H3	387 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	TBC1D5	Q92609	795 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	BRF1	Q92994	677 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	TEX13B	Q9BXU2	312 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	ADAM33	Q9BZ11	813 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	MROH8	Q9H579	483 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	CWC22	Q9HCG8	908 aa	Known RBP	10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	SLC12A7	Q9Y666	1083 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	ZSWIM8	A7E2V4	1837 aa		10.28	□□□□□ -0.76
PRKCH-222	ENST00000556778	KLF18	A0A0U1RQI7	1052 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	DHX16	O60231	1041 aa	Known RBP	10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	GNRH1	P01148	92 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	ICAM1	P05362	532 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	CDC27	P30260	824 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	MAP2K5	Q13163	448 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	TOB2	Q14106	344 aa	Predicted RBP	10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	GRB14	Q14449	540 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	ARHGEF6	Q15052	776 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	CDC37	Q16543	378 aa	Predicted RBP	10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	QRICH1	Q2TAL8	776 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	USH1G	Q495M9	461 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	ASPRV1	Q53RT3	343 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	PRAMEF19	Q5SWL8	479 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	GPATCH4	Q5T3I0	446 aa	Known RBP	10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	MICU3	Q86XE3	530 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	SRBD1	Q8N5C6	995 aa	Known RBP	10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	SHCBP1	Q8NEM2	672 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	CLEC4D	Q8WXI8	215 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	TRIB2	Q92519	343 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	ZDHHC16	Q969W1	377 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	TRERF1	Q96PN7	1200 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	PIGS	Q96S52	555 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	KCNK17	Q96T54	332 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	MMP19	Q99542	508 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	NUDT12	Q9BQG2	462 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	CCPG1	Q9ULG6	757 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	NAP1L2	Q9ULW6	460 aa	Predicted RBP	10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	HTT	P42858	3142 aa		10.27	□□□□□ -0.77
PRKCH-222	ENST00000556778	SLC15A5	A6NIM6	579 aa		10.26	□□□□□ -0.77
PRKCH-222	ENST00000556778	NFIB	O00712	420 aa		10.26	□□□□□ -0.77
PRKCH-222	ENST00000556778	EPB41L2	O43491	1005 aa	Known RBP	10.26	□□□□□ -0.77
PRKCH-222	ENST00000556778	SLC25A27	O95847	323 aa		10.26	□□□□□ -0.77
PRKCH-222	ENST00000556778	HMGB1	P09429	215 aa	Known RBP	10.26	□□□□□ -0.77
PRKCH-222	ENST00000556778	FCER1A	P12319	257 aa		10.26	□□□□□ -0.77
PRKCH-222	ENST00000556778	GRK4	P32298	578 aa		10.26	□□□□□ -0.77
PRKCH-222	ENST00000556778	CYP2C19	P33261	490 aa		10.26	□□□□□ -0.77
PRKCH-222	ENST00000556778	ADD1	P35611	737 aa	Known RBP	10.26	□□□□□ -0.77
PRKCH-222	ENST00000556778	OAZ1	P54368	228 aa		10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms