RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 STXBP3O00186 592 aa12.98□□□□□ -0.33
FOXN3-212ENST00000556541 PIK3CDO00329 1044 aa12.98□□□□□ -0.33
FOXN3-212ENST00000556541 HSP90AA1P07900 732 aaKnown RBP12.98□□□□□ -0.33
FOXN3-212ENST00000556541 CALML3P27482 149 aa12.98□□□□□ -0.33
FOXN3-212ENST00000556541 MAP2K1Q02750 393 aaPredicted RBP12.98□□□□□ -0.33
FOXN3-212ENST00000556541 WWC2Q6AWC2 1192 aa12.98□□□□□ -0.33
FOXN3-212ENST00000556541 CCDC82Q8N4S0 544 aa12.98□□□□□ -0.33
FOXN3-212ENST00000556541 GPRC5AQ8NFJ5 357 aa12.98□□□□□ -0.33
FOXN3-212ENST00000556541 FBXO18Q8NFZ0 1043 aa12.98□□□□□ -0.33
FOXN3-212ENST00000556541 ALG1Q9BT22 464 aa12.98□□□□□ -0.33
FOXN3-212ENST00000556541 MROH8Q9H579 483 aa12.98□□□□□ -0.33
FOXN3-212ENST00000556541 VAT1LQ9HCJ6 419 aa12.98□□□□□ -0.33
FOXN3-212ENST00000556541 BTBD7Q9P203 1132 aa12.98□□□□□ -0.33
FOXN3-212ENST00000556541 CCPG1Q9ULG6 757 aa12.98□□□□□ -0.33
FOXN3-212ENST00000556541 PCDHA1Q9Y5I3 950 aa12.98□□□□□ -0.33
FOXN3-212ENST00000556541 CYP2C8P10632 490 aa12.97□□□□□ -0.33
FOXN3-212ENST00000556541 GNA11P29992 359 aa12.97□□□□□ -0.33
FOXN3-212ENST00000556541 DDIT3P35638 169 aa12.97□□□□□ -0.33
FOXN3-212ENST00000556541 HOMER1Q86YM7 354 aa12.97□□□□□ -0.33
FOXN3-212ENST00000556541 MCF2L2Q86YR7 1114 aa12.97□□□□□ -0.33
FOXN3-212ENST00000556541 ABRAQ8N0Z2 381 aa12.97□□□□□ -0.33
FOXN3-212ENST00000556541 BICD2Q8TD16 824 aa12.97□□□□□ -0.33
FOXN3-212ENST00000556541 PHF20Q9BVI0 1012 aa12.97□□□□□ -0.33
FOXN3-212ENST00000556541 TXNRD2Q9NNW7 524 aa12.97□□□□□ -0.33
FOXN3-212ENST00000556541 CIZ1Q9ULV3 898 aaPredicted RBP12.97□□□□□ -0.33
FOXN3-212ENST00000556541 CASP8AP2Q9UKL3 1982 aa12.96□□□□□ -0.33
FOXN3-212ENST00000556541 LOC102724159A0A0B4J2E5 919 aa12.96□□□□□ -0.33
FOXN3-212ENST00000556541 STRNO43815 780 aa12.96□□□□□ -0.33
FOXN3-212ENST00000556541 MAPK4P31152 587 aa12.96□□□□□ -0.33
FOXN3-212ENST00000556541 CRHR2Q13324 411 aa12.96□□□□□ -0.33
FOXN3-212ENST00000556541 TRIM29Q14134 588 aa12.96□□□□□ -0.33
FOXN3-212ENST00000556541 PWP2Q15269 919 aaKnown RBP12.96□□□□□ -0.33
FOXN3-212ENST00000556541 SNRNP48Q6IEG0 339 aaKnown RBP12.96□□□□□ -0.33
FOXN3-212ENST00000556541 HEATR3Q7Z4Q2 680 aa12.96□□□□□ -0.33
FOXN3-212ENST00000556541 CLEC4DQ8WXI8 215 aa12.96□□□□□ -0.33
FOXN3-212ENST00000556541 DDX11Q96FC9 970 aa12.96□□□□□ -0.33
FOXN3-212ENST00000556541 C8orf76Q96K31 380 aa12.96□□□□□ -0.33
FOXN3-212ENST00000556541 MOV10L1Q9BXT6 1211 aaKnown RBP12.96□□□□□ -0.33
FOXN3-212ENST00000556541 ACAD9Q9H845 621 aa12.96□□□□□ -0.33
FOXN3-212ENST00000556541 RAVER2Q9HCJ3 691 aaKnown RBP12.96□□□□□ -0.33
FOXN3-212ENST00000556541 RIC8AQ9NPQ8 531 aa12.96□□□□□ -0.33
FOXN3-212ENST00000556541 RNF186Q9NXI6 227 aa12.96□□□□□ -0.33
FOXN3-212ENST00000556541 DAXXQ9UER7 740 aaPredicted RBP12.96□□□□□ -0.33
FOXN3-212ENST00000556541 LCTP09848 1927 aa12.96□□□□□ -0.34
FOXN3-212ENST00000556541 PFASO15067 1338 aa12.95□□□□□ -0.34
FOXN3-212ENST00000556541 OPLAHO14841 1288 aa12.95□□□□□ -0.34
FOXN3-212ENST00000556541 MMP1P03956 469 aa12.95□□□□□ -0.34
FOXN3-212ENST00000556541 HSD17B4P51659 736 aa12.95□□□□□ -0.34
FOXN3-212ENST00000556541 MRPL12P52815 198 aaKnown RBP12.95□□□□□ -0.34
FOXN3-212ENST00000556541 NAPAP54920 295 aa12.95□□□□□ -0.34
FOXN3-212ENST00000556541 AP3B2Q13367 1082 aa12.95□□□□□ -0.34
FOXN3-212ENST00000556541 NPY5RQ15761 445 aa12.95□□□□□ -0.34
FOXN3-212ENST00000556541 LARP1BQ659C4 914 aaKnown RBP12.95□□□□□ -0.34
FOXN3-212ENST00000556541 TYW1BQ6NUM6 668 aa12.95□□□□□ -0.34
FOXN3-212ENST00000556541 CCDC174Q6PII3 467 aa12.95□□□□□ -0.34
FOXN3-212ENST00000556541 CUL5Q93034 780 aa12.95□□□□□ -0.34
FOXN3-212ENST00000556541 AGBL1Q96MI9 1066 aa12.95□□□□□ -0.34
FOXN3-212ENST00000556541 C6orf50Q9HD87 102 aa12.95□□□□□ -0.34
FOXN3-212ENST00000556541 RNF146Q9NTX7 359 aa12.95□□□□□ -0.34
FOXN3-212ENST00000556541 PCDHA4Q9UN74 947 aa12.95□□□□□ -0.34
FOXN3-212ENST00000556541 MYH15Q9Y2K3 1946 aa12.95□□□□□ -0.34
FOXN3-212ENST00000556541 PLXNA1Q9UIW2 1896 aa12.95□□□□□ -0.34
FOXN3-212ENST00000556541 M0R2N6 131 aa12.94□□□□□ -0.34
FOXN3-212ENST00000556541 FOSP01100 380 aaPredicted RBP12.94□□□□□ -0.34
FOXN3-212ENST00000556541 SYT1P21579 422 aa12.94□□□□□ -0.34
FOXN3-212ENST00000556541 CLK2P49760 499 aaKnown RBP12.94□□□□□ -0.34
FOXN3-212ENST00000556541 ADCY7P51828 1080 aa12.94□□□□□ -0.34
FOXN3-212ENST00000556541 GRM1Q13255 1194 aa12.94□□□□□ -0.34
FOXN3-212ENST00000556541 Q3C1V9 767 aa12.94□□□□□ -0.34
FOXN3-212ENST00000556541 KRT40Q6A162 431 aa12.94□□□□□ -0.34
FOXN3-212ENST00000556541 CPXCR1Q8N123 301 aa12.94□□□□□ -0.34
FOXN3-212ENST00000556541 ANKRD13CQ8N6S4 541 aa12.94□□□□□ -0.34
FOXN3-212ENST00000556541 GPKOWQ92917 476 aaPredicted RBP eCLIP12.94□□□□□ -0.34
FOXN3-212ENST00000556541 COA7Q96BR5 231 aa12.94□□□□□ -0.34
FOXN3-212ENST00000556541 SHISA4Q96DD7 197 aa12.94□□□□□ -0.34
FOXN3-212ENST00000556541 TRERF1Q96PN7 1200 aa12.94□□□□□ -0.34
FOXN3-212ENST00000556541 PAGR1Q9BTK6 254 aa12.94□□□□□ -0.34
FOXN3-212ENST00000556541 FOXP1Q9H334 677 aaPredicted RBP12.94□□□□□ -0.34
FOXN3-212ENST00000556541 BRMS1Q9HCU9 246 aa12.94□□□□□ -0.34
FOXN3-212ENST00000556541 VPS54Q9P1Q0 977 aa12.94□□□□□ -0.34
FOXN3-212ENST00000556541 RIPK3Q9Y572 518 aa12.94□□□□□ -0.34
FOXN3-212ENST00000556541 FRMPD4Q14CM0 1322 aa12.93□□□□□ -0.34
FOXN3-212ENST00000556541 hCG_1642624A0A1W2PR95 340 aa12.93□□□□□ -0.34
FOXN3-212ENST00000556541 SMCO2A6NFE2 343 aa12.93□□□□□ -0.34
FOXN3-212ENST00000556541 STX6O43752 255 aa12.93□□□□□ -0.34
FOXN3-212ENST00000556541 GNRH1P01148 92 aa12.93□□□□□ -0.34
FOXN3-212ENST00000556541 ALAS1P13196 640 aa12.93□□□□□ -0.34
FOXN3-212ENST00000556541 ERCC3P19447 782 aa12.93□□□□□ -0.34
FOXN3-212ENST00000556541 U2AF2P26368 475 aaKnown RBP eCLIP12.93□□□□□ -0.342e-12■■■□□ 14.7
FOXN3-212ENST00000556541 SAFBQ15424 915 aaKnown RBP eCLIP12.93□□□□□ -0.34
FOXN3-212ENST00000556541 BLIDQ8IZY5 108 aa12.93□□□□□ -0.34
FOXN3-212ENST00000556541 AIFM3Q96NN9 605 aa12.93□□□□□ -0.34
FOXN3-212ENST00000556541 PSTPIP2Q9H939 334 aa12.93□□□□□ -0.34
FOXN3-212ENST00000556541 WBP1LQ9NX94 342 aa12.93□□□□□ -0.34
FOXN3-212ENST00000556541 DOCK3Q8IZD9 2030 aa12.93□□□□□ -0.34
FOXN3-212ENST00000556541 MYH7BA7E2Y1 1941 aa12.92□□□□□ -0.34
FOXN3-212ENST00000556541 DNAJC25-GNG10A0A024R161 153 aa12.92□□□□□ -0.34
FOXN3-212ENST00000556541 GCOM1H8Y6P7 765 aaPredicted RBP12.92□□□□□ -0.34
FOXN3-212ENST00000556541 MEIS2O14770 477 aa12.92□□□□□ -0.34
FOXN3-212ENST00000556541 POLR2MP0CAP2 368 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms