RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 SCG2P13521 617 aa20.11■□□□□ 0.81
TUBB3-211ENST00000556536 ANP32AP39687 249 aaKnown RBP20.11■□□□□ 0.81
TUBB3-211ENST00000556536 BECN1Q14457 450 aa20.11■□□□□ 0.81
TUBB3-211ENST00000556536 WWC2Q6AWC2 1192 aa20.11■□□□□ 0.81
TUBB3-211ENST00000556536 HEATR3Q7Z4Q2 680 aa20.11■□□□□ 0.81
TUBB3-211ENST00000556536 PCDHA1Q9Y5I3 950 aa20.11■□□□□ 0.81
TUBB3-211ENST00000556536 ALAS1P13196 640 aa20.1■□□□□ 0.81
TUBB3-211ENST00000556536 TYW1BQ6NUM6 668 aa20.1■□□□□ 0.81
TUBB3-211ENST00000556536 RIOX2Q8IUF8 465 aa20.1■□□□□ 0.81
TUBB3-211ENST00000556536 SHISA4Q96DD7 197 aa20.1■□□□□ 0.81
TUBB3-211ENST00000556536 PORCNQ9H237 461 aa20.1■□□□□ 0.81
TUBB3-211ENST00000556536 HOMER2Q9NSB8 354 aa20.1■□□□□ 0.81
TUBB3-211ENST00000556536 RBM27Q9P2N5 1060 aaKnown RBP20.1■□□□□ 0.81
TUBB3-211ENST00000556536 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.1■□□□□ 0.81
TUBB3-211ENST00000556536 STXBP3O00186 592 aa20.09■□□□□ 0.81
TUBB3-211ENST00000556536 MUM1L1Q5H9M0 696 aa20.09■□□□□ 0.81
TUBB3-211ENST00000556536 SPRYD3Q8NCJ5 442 aa20.09■□□□□ 0.81
TUBB3-211ENST00000556536 INTS4Q96HW7 963 aaKnown RBP20.09■□□□□ 0.81
TUBB3-211ENST00000556536 SMC3Q9UQE7 1217 aa20.09■□□□□ 0.81
TUBB3-211ENST00000556536 ERCC3P19447 782 aa20.08■□□□□ 0.81
TUBB3-211ENST00000556536 GJB2P29033 226 aa20.08■□□□□ 0.81
TUBB3-211ENST00000556536 HMGN5P82970 282 aaKnown RBP20.08■□□□□ 0.81
TUBB3-211ENST00000556536 NCAPG2Q86XI2 1143 aa20.08■□□□□ 0.81
TUBB3-211ENST00000556536 CLEC4DQ8WXI8 215 aa20.08■□□□□ 0.81
TUBB3-211ENST00000556536 TRERF1Q96PN7 1200 aa20.08■□□□□ 0.81
TUBB3-211ENST00000556536 ALG1Q9BT22 464 aa20.08■□□□□ 0.81
TUBB3-211ENST00000556536 EFCC1Q9HA90 598 aa20.08■□□□□ 0.81
TUBB3-211ENST00000556536 GJB4Q9NTQ9 266 aa20.08■□□□□ 0.81
TUBB3-211ENST00000556536 RNF146Q9NTX7 359 aa20.08■□□□□ 0.81
TUBB3-211ENST00000556536 BARHL2Q9NY43 387 aa20.08■□□□□ 0.81
TUBB3-211ENST00000556536 VPS54Q9P1Q0 977 aa20.08■□□□□ 0.81
TUBB3-211ENST00000556536 ABCB11O95342 1321 aa20.07■□□□□ 0.8
TUBB3-211ENST00000556536 BAZ2BQ9UIF8 2168 aaKnown RBP20.07■□□□□ 0.8
TUBB3-211ENST00000556536 OPLAHO14841 1288 aa20.07■□□□□ 0.8
TUBB3-211ENST00000556536 ECM2O94769 699 aaPredicted RBP20.07■□□□□ 0.8
TUBB3-211ENST00000556536 FOSBP53539 338 aa20.07■□□□□ 0.8
TUBB3-211ENST00000556536 CCNA1P78396 465 aa20.07■□□□□ 0.8
TUBB3-211ENST00000556536 ZNF296Q8WUU4 475 aaPredicted RBP20.07■□□□□ 0.8
TUBB3-211ENST00000556536 PNMA2Q9UL42 364 aa20.07■□□□□ 0.8
TUBB3-211ENST00000556536 NFIBO00712 420 aa20.06■□□□□ 0.8
TUBB3-211ENST00000556536 SLC25A27O95847 323 aa20.06■□□□□ 0.8
TUBB3-211ENST00000556536 NAPAP54920 295 aa20.06■□□□□ 0.8
TUBB3-211ENST00000556536 TKFCQ3LXA3 575 aa20.06■□□□□ 0.8
TUBB3-211ENST00000556536 SHCBP1Q8NEM2 672 aa20.06■□□□□ 0.8
TUBB3-211ENST00000556536 WASF1Q92558 559 aa20.06■□□□□ 0.8
TUBB3-211ENST00000556536 MRPL11Q9Y3B7 192 aaKnown RBP20.06■□□□□ 0.8
TUBB3-211ENST00000556536 hCG_1984214I3L0E3 225 aa20.05■□□□□ 0.8
TUBB3-211ENST00000556536 GPR25O00155 361 aa20.05■□□□□ 0.8
TUBB3-211ENST00000556536 HSP90AA1P07900 732 aaKnown RBP20.05■□□□□ 0.8
TUBB3-211ENST00000556536 CTGFP29279 349 aa20.05■□□□□ 0.8
TUBB3-211ENST00000556536 TRAF1Q13077 416 aa20.05■□□□□ 0.8
TUBB3-211ENST00000556536 NOM1Q5C9Z4 860 aaKnown RBP20.05■□□□□ 0.8
TUBB3-211ENST00000556536 WDR78Q5VTH9 848 aa20.05■□□□□ 0.8
TUBB3-211ENST00000556536 ZNF713Q8N859 430 aaPredicted RBP20.05■□□□□ 0.8
TUBB3-211ENST00000556536 FAM184AQ8NB25 1140 aa20.05■□□□□ 0.8
TUBB3-211ENST00000556536 CHST13Q8NET6 341 aa20.05■□□□□ 0.8
TUBB3-211ENST00000556536 TBC1D5Q92609 795 aa20.05■□□□□ 0.8
TUBB3-211ENST00000556536 MROH8Q9H579 483 aa20.05■□□□□ 0.8
TUBB3-211ENST00000556536 COL11A1P12107 1806 aaPredicted RBP20.04■□□□□ 0.8
TUBB3-211ENST00000556536 ADAMTS3O15072 1205 aa20.04■□□□□ 0.8
TUBB3-211ENST00000556536 COPB2P35606 906 aa20.04■□□□□ 0.8
TUBB3-211ENST00000556536 CAP1Q01518 475 aa20.04■□□□□ 0.8
TUBB3-211ENST00000556536 SP3Q02447 781 aa20.04■□□□□ 0.8
TUBB3-211ENST00000556536 PPP1R18Q6NYC8 613 aa20.04■□□□□ 0.8
TUBB3-211ENST00000556536 ARHGAP39Q9C0H5 1083 aa20.04■□□□□ 0.8
TUBB3-211ENST00000556536 ACAD9Q9H845 621 aa20.04■□□□□ 0.8
TUBB3-211ENST00000556536 KCNJ14Q9UNX9 436 aa20.04■□□□□ 0.8
TUBB3-211ENST00000556536 MAPK4P31152 587 aa20.03■□□□□ 0.8
TUBB3-211ENST00000556536 LACTBP83111 547 aaPredicted RBP20.03■□□□□ 0.8
TUBB3-211ENST00000556536 CCAR1Q8IX12 1150 aaKnown RBP20.03■□□□□ 0.8
TUBB3-211ENST00000556536 SH3GLB2Q9NR46 395 aa20.03■□□□□ 0.8
TUBB3-211ENST00000556536 FBXO40Q9UH90 709 aa20.03■□□□□ 0.8
TUBB3-211ENST00000556536 SMCO2A6NFE2 343 aa20.02■□□□□ 0.8
TUBB3-211ENST00000556536 GUCY1B3Q02153 619 aa20.02■□□□□ 0.8
TUBB3-211ENST00000556536 FBXO46Q6PJ61 603 aaPredicted RBP20.02■□□□□ 0.8
TUBB3-211ENST00000556536 NSMFQ6X4W1 530 aa20.02■□□□□ 0.8
TUBB3-211ENST00000556536 GPR142Q7Z601 462 aa20.02■□□□□ 0.8
TUBB3-211ENST00000556536 PLEKHH3Q7Z736 793 aa20.02■□□□□ 0.8
TUBB3-211ENST00000556536 C8orf76Q96K31 380 aa20.02■□□□□ 0.8
TUBB3-211ENST00000556536 PSTPIP2Q9H939 334 aa20.02■□□□□ 0.8
TUBB3-211ENST00000556536 A1CFQ9NQ94 594 aaKnown RBP20.02■□□□□ 0.8
TUBB3-211ENST00000556536 ADCY7P51828 1080 aa20.01■□□□□ 0.79
TUBB3-211ENST00000556536 NLRP5P59047 1200 aa20.01■□□□□ 0.79
TUBB3-211ENST00000556536 NPY5RQ15761 445 aa20.01■□□□□ 0.79
TUBB3-211ENST00000556536 KRT40Q6A162 431 aa20.01■□□□□ 0.79
TUBB3-211ENST00000556536 SLC30A10Q6XR72 485 aa20.01■□□□□ 0.79
TUBB3-211ENST00000556536 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.01■□□□□ 0.79
TUBB3-211ENST00000556536 CCDC148Q8NFR7 591 aa20.01■□□□□ 0.79
TUBB3-211ENST00000556536 CD99L2Q8TCZ2 262 aa20.01■□□□□ 0.79
TUBB3-211ENST00000556536 CCDC12Q8WUD4 166 aaPredicted RBP20.01■□□□□ 0.79
TUBB3-211ENST00000556536 TRIM47Q96LD4 638 aa20.01■□□□□ 0.79
TUBB3-211ENST00000556536 MMP19Q99542 508 aa20.01■□□□□ 0.79
TUBB3-211ENST00000556536 PHF20Q9BVI0 1012 aa20.01■□□□□ 0.79
TUBB3-211ENST00000556536 ZMYND12Q9H0C1 365 aa20.01■□□□□ 0.79
TUBB3-211ENST00000556536 CWC22Q9HCG8 908 aaKnown RBP20.01■□□□□ 0.79
TUBB3-211ENST00000556536 RIC8AQ9NPQ8 531 aa20.01■□□□□ 0.79
TUBB3-211ENST00000556536 ESYT2A0FGR8 921 aa20■□□□□ 0.79
TUBB3-211ENST00000556536 FKTNO75072 461 aa20■□□□□ 0.79
TUBB3-211ENST00000556536 CFBP00751 764 aa20■□□□□ 0.79
TUBB3-211ENST00000556536 XBP1P17861 261 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms