RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 CMA1P23946 247 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 ATP2C1P98194 919 aaPredicted RBP12.36□□□□□ -0.43
LINC01550-206ENST00000556462 USP17L24Q0WX57 530 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 PTGDRQ13258 359 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 SH3D19Q5HYK7 790 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 USP17L6PQ6QN14 398 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 ANKRD13AQ8IZ07 590 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 C4orf32Q8N8J7 132 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 KRI1Q8N9T8 703 aaKnown RBP12.36□□□□□ -0.43
LINC01550-206ENST00000556462 TBCKQ8TEA7 893 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 SYAP1Q96A49 352 aaPredicted RBP12.36□□□□□ -0.43
LINC01550-206ENST00000556462 CLMNQ96JQ2 1002 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 SLF1Q9BQI6 1058 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 GLT8D2Q9H1C3 349 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 CSADQ9Y600 493 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 PAPPA2Q9BXP8 1791 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 ZNF536O15090 1300 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 A0A1B0GVL5 298 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 CUTAO60888 179 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 MCM7P33993 719 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 ZNF445P59923 1031 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 FMR1Q06787 632 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC01550-206ENST00000556462 CCDC183Q5T5S1 534 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 CCDC174Q6PII3 467 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 SAMD1Q6SPF0 538 aaPredicted RBP12.36□□□□□ -0.43
LINC01550-206ENST00000556462 FSIP1Q8NA03 581 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 RBM46Q8TBY0 533 aaKnown RBP12.36□□□□□ -0.43
LINC01550-206ENST00000556462 MRPS27Q92552 414 aaKnown RBP12.36□□□□□ -0.43
LINC01550-206ENST00000556462 TANGO6Q9C0B7 1094 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 PPP1R9AQ9ULJ8 1098 aa12.36□□□□□ -0.43
LINC01550-206ENST00000556462 SMCHD1A6NHR9 2005 aa12.35□□□□□ -0.43
LINC01550-206ENST00000556462 TRAF5O00463 557 aa12.35□□□□□ -0.43
LINC01550-206ENST00000556462 FLOT1O75955 427 aa12.35□□□□□ -0.43
LINC01550-206ENST00000556462 NDUFA8P51970 172 aa12.35□□□□□ -0.43
LINC01550-206ENST00000556462 NEK8Q86SG6 692 aa12.35□□□□□ -0.43
LINC01550-206ENST00000556462 FMR1NBQ8N0W7 255 aaPredicted RBP12.35□□□□□ -0.43
LINC01550-206ENST00000556462 P2RX7Q99572 595 aaKnown RBP12.35□□□□□ -0.43
LINC01550-206ENST00000556462 FAM237AA0A1B0GTK4 181 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 FAM160A1Q05DH4 1040 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 PPATQ06203 517 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 TRAF1Q13077 416 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 LDLRAD1Q5T700 205 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 RESP18Q5W5W9 173 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 LDHDQ86WU2 507 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 GAS2L3Q86XJ1 694 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 ZNF579Q8NAF0 562 aaKnown RBP12.34□□□□□ -0.43
LINC01550-206ENST00000556462 ELP3Q9H9T3 547 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 SLC38A10Q9HBR0 1119 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 DDX19AQ9NUU7 478 aaKnown RBP12.34□□□□□ -0.43
LINC01550-206ENST00000556462 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.34□□□□□ -0.43
LINC01550-206ENST00000556462 HPSEQ9Y251 543 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 SYCE3A1L190 88 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 IRF6O14896 467 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 ICAM1P05362 532 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 TTLL12Q14166 644 aaPredicted RBP12.34□□□□□ -0.43
LINC01550-206ENST00000556462 IL17AQ16552 155 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 LETM2Q2VYF4 491 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 SPECC1Q5M775 1068 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 CATSPERGQ6ZRH7 1159 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 CCDC73Q6ZRK6 1079 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 ERO1BQ86YB8 467 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 AGBL1Q96MI9 1066 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 TMEM60Q9H2L4 133 aa12.34□□□□□ -0.43
LINC01550-206ENST00000556462 OTOFQ9HC10 1997 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 SPDYE5A6NIY4 337 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 PIK3CDO00329 1044 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 CCNT1O60563 726 aaKnown RBP12.33□□□□□ -0.44
LINC01550-206ENST00000556462 PFKFB1P16118 471 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 ARMC9Q7Z3E5 817 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 TBC1D5Q92609 795 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 FERMT2Q96AC1 680 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 WNK4Q96J92 1243 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 CSRNP2Q9H175 543 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 NMRK2Q9NPI5 230 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 TMOD4Q9NZQ9 345 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 ADAMTS5Q9UNA0 930 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 VWA5AO00534 786 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 DSG3P32926 999 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 AP3B2Q13367 1082 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 CAMK4Q16566 473 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 ARL6IP4Q66PJ3 421 aaKnown RBP12.33□□□□□ -0.44
LINC01550-206ENST00000556462 CRYGNQ8WXF5 182 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 ATG4CQ96DT6 458 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 OTUD5Q96G74 571 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 NUP62CLQ9H1M0 184 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 CLSTN2Q9H4D0 955 aa12.33□□□□□ -0.44
LINC01550-206ENST00000556462 MRPL11Q9Y3B7 192 aaKnown RBP12.33□□□□□ -0.44
LINC01550-206ENST00000556462 ZNF202O95125 648 aa12.32□□□□□ -0.44
LINC01550-206ENST00000556462 LETM1O95202 739 aaPredicted RBP12.32□□□□□ -0.44
LINC01550-206ENST00000556462 FDX1P10109 184 aa12.32□□□□□ -0.44
LINC01550-206ENST00000556462 COG2Q14746 738 aa12.32□□□□□ -0.44
LINC01550-206ENST00000556462 USP49Q70CQ1 688 aa12.32□□□□□ -0.44
LINC01550-206ENST00000556462 TEX2Q8IWB9 1127 aa12.32□□□□□ -0.44
LINC01550-206ENST00000556462 RAVER2Q9HCJ3 691 aaKnown RBP12.32□□□□□ -0.44
LINC01550-206ENST00000556462 CCPG1Q9ULG6 757 aa12.32□□□□□ -0.44
LINC01550-206ENST00000556462 ABCB11O95342 1321 aa12.32□□□□□ -0.44
LINC01550-206ENST00000556462 A0A0G2JLL6 359 aaPredicted RBP12.31□□□□□ -0.44
LINC01550-206ENST00000556462 FSD2A1L4K1 749 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 VWA3AA6NCI4 1184 aa12.31□□□□□ -0.44
LINC01550-206ENST00000556462 CXCL11O14625 94 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms