RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 PFKFB3Q16875 520 aaPredicted RBP16.21■□□□□ 0.19
VIPAS39-208ENST00000556412 MUM1L1Q5H9M0 696 aa16.21■□□□□ 0.19
VIPAS39-208ENST00000556412 WWC2Q6AWC2 1192 aa16.21■□□□□ 0.19
VIPAS39-208ENST00000556412 NSMFQ6X4W1 530 aa16.21■□□□□ 0.19
VIPAS39-208ENST00000556412 SHCBP1Q8NEM2 672 aa16.21■□□□□ 0.19
VIPAS39-208ENST00000556412 ACAD9Q9H845 621 aa16.21■□□□□ 0.19
VIPAS39-208ENST00000556412 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
VIPAS39-208ENST00000556412 NFIBO00712 420 aa16.2■□□□□ 0.18
VIPAS39-208ENST00000556412 DEXIO95424 95 aa16.2■□□□□ 0.18
VIPAS39-208ENST00000556412 CTCFP49711 727 aaPredicted RBP16.2■□□□□ 0.18
VIPAS39-208ENST00000556412 LBX1P52954 281 aa16.2■□□□□ 0.18
VIPAS39-208ENST00000556412 FOSBP53539 338 aa16.2■□□□□ 0.18
VIPAS39-208ENST00000556412 NAPAP54920 295 aa16.2■□□□□ 0.18
VIPAS39-208ENST00000556412 PKN1Q16512 942 aa16.2■□□□□ 0.18
VIPAS39-208ENST00000556412 TKFCQ3LXA3 575 aa16.2■□□□□ 0.18
VIPAS39-208ENST00000556412 GPR142Q7Z601 462 aa16.2■□□□□ 0.18
VIPAS39-208ENST00000556412 PLEKHH3Q7Z736 793 aa16.2■□□□□ 0.18
VIPAS39-208ENST00000556412 ANKRD35Q8N283 1001 aa16.2■□□□□ 0.18
VIPAS39-208ENST00000556412 CHST13Q8NET6 341 aa16.2■□□□□ 0.18
VIPAS39-208ENST00000556412 ERO1AQ96HE7 468 aa16.2■□□□□ 0.18
VIPAS39-208ENST00000556412 LLPHQ9BRT6 129 aaKnown RBP16.2■□□□□ 0.18
VIPAS39-208ENST00000556412 FBXO40Q9UH90 709 aa16.2■□□□□ 0.18
VIPAS39-208ENST00000556412 MRPL11Q9Y3B7 192 aaKnown RBP16.2■□□□□ 0.18
VIPAS39-208ENST00000556412 HSP90AA1P07900 732 aaKnown RBP16.19■□□□□ 0.18
VIPAS39-208ENST00000556412 CTGFP29279 349 aa16.19■□□□□ 0.18
VIPAS39-208ENST00000556412 KCTD2Q14681 263 aa16.19■□□□□ 0.18
VIPAS39-208ENST00000556412 TRIM47Q96LD4 638 aa16.19■□□□□ 0.18
VIPAS39-208ENST00000556412 AIFM3Q96NN9 605 aa16.19■□□□□ 0.18
VIPAS39-208ENST00000556412 MMP19Q99542 508 aa16.19■□□□□ 0.18
VIPAS39-208ENST00000556412 PCNTO95613 3336 aa16.19■□□□□ 0.18
VIPAS39-208ENST00000556412 STK36Q9NRP7 1315 aa16.19■□□□□ 0.18
VIPAS39-208ENST00000556412 FCER1AP12319 257 aa16.19■□□□□ 0.18
VIPAS39-208ENST00000556412 NOM1Q5C9Z4 860 aaKnown RBP16.19■□□□□ 0.18
VIPAS39-208ENST00000556412 FAM184AQ8NB25 1140 aa16.19■□□□□ 0.18
VIPAS39-208ENST00000556412 VPS54Q9P1Q0 977 aa16.19■□□□□ 0.18
VIPAS39-208ENST00000556412 A0A0G2JMZ2 1700 aa16.18■□□□□ 0.18
VIPAS39-208ENST00000556412 STXBP3O00186 592 aa16.18■□□□□ 0.18
VIPAS39-208ENST00000556412 CLEC4DQ8WXI8 215 aa16.18■□□□□ 0.18
VIPAS39-208ENST00000556412 WASF1Q92558 559 aa16.18■□□□□ 0.18
VIPAS39-208ENST00000556412 ALG1Q9BT22 464 aa16.18■□□□□ 0.18
VIPAS39-208ENST00000556412 BARHL2Q9NY43 387 aa16.18■□□□□ 0.18
VIPAS39-208ENST00000556412 SMC3Q9UQE7 1217 aa16.18■□□□□ 0.18
VIPAS39-208ENST00000556412 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.18■□□□□ 0.18
VIPAS39-208ENST00000556412 hCG_1984214I3L0E3 225 aa16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 CFBP00751 764 aa16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 FDPSP14324 419 aaKnown RBP16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 HMGN5P82970 282 aaKnown RBP16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 CAP1Q01518 475 aa16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 BECN1Q14457 450 aa16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 ZNF713Q8N859 430 aaPredicted RBP16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 SPRYD3Q8NCJ5 442 aa16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 SMARCC2Q8TAQ2 1214 aa16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 A1CFQ9NQ94 594 aaKnown RBP16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 RLFQ13129 1914 aa16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 PGK2P07205 417 aa16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 PTPREP23469 700 aa16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 CALML3P27482 149 aa16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 CUL4AQ13619 759 aa16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 ARHGEF6Q15052 776 aa16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 TYW1BQ6NUM6 668 aa16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 RNF207Q6ZRF8 634 aa16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 MCF2L2Q86YR7 1114 aa16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 CCDC12Q8WUD4 166 aaPredicted RBP16.17■□□□□ 0.18
VIPAS39-208ENST00000556412 STRNO43815 780 aa16.16■□□□□ 0.18
VIPAS39-208ENST00000556412 GJB2P29033 226 aa16.16■□□□□ 0.18
VIPAS39-208ENST00000556412 ADORA2AP29274 412 aa16.16■□□□□ 0.18
VIPAS39-208ENST00000556412 HOXA13P31271 388 aaPredicted RBP16.16■□□□□ 0.18
VIPAS39-208ENST00000556412 ANP32AP39687 249 aaKnown RBP16.16■□□□□ 0.18
VIPAS39-208ENST00000556412 BAATQ14032 418 aaPredicted RBP16.16■□□□□ 0.18
VIPAS39-208ENST00000556412 SLC30A10Q6XR72 485 aa16.16■□□□□ 0.18
VIPAS39-208ENST00000556412 DPP9Q86TI2 863 aa16.16■□□□□ 0.18
VIPAS39-208ENST00000556412 TBC1D5Q92609 795 aa16.16■□□□□ 0.18
VIPAS39-208ENST00000556412 PSTPIP2Q9H939 334 aa16.16■□□□□ 0.18
VIPAS39-208ENST00000556412 TSHZ2Q9NRE2 1034 aa16.16■□□□□ 0.18
VIPAS39-208ENST00000556412 GJB4Q9NTQ9 266 aa16.16■□□□□ 0.18
VIPAS39-208ENST00000556412 TRIM17Q9Y577 477 aa16.16■□□□□ 0.18
VIPAS39-208ENST00000556412 SMCO2A6NFE2 343 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 SLC15A5A6NIM6 579 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 OPLAHO14841 1288 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 XBP1P17861 261 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 ADCY7P51828 1080 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 NLRP5P59047 1200 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 PRKCZQ05513 592 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 TRIM29Q14134 588 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 PPP1R18Q6NYC8 613 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 CCDC148Q8NFR7 591 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 NUDT12Q9BQG2 462 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 CYP39A1Q9NYL5 469 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 PFASO15067 1338 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 GCOM1H8Y6P7 765 aaPredicted RBP16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 POLR2MP0CAP2 368 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 CYP2B6P20813 491 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 HOXD10P28358 340 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 RPS6P62753 249 aaKnown RBP16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 GRB14Q14449 540 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 SOCS4Q8WXH5 440 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 CUL5Q93034 780 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 GABRQQ9UN88 632 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 KCNJ14Q9UNX9 436 aa16.15■□□□□ 0.18
VIPAS39-208ENST00000556412 KIF3AQ9Y496 699 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms