RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 STAG1Q8WVM7 1258 aa16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 EFCC1Q9HA90 598 aa16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 TSPOAP1O95153 1857 aa16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 GJC1P36383 396 aa16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 MAGEA9P43362 315 aa16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 GSTA5Q7RTV2 222 aa16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 MRPL44Q9H9J2 332 aaKnown RBP16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 SLC7A5Q01650 507 aa16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 ZBTB1Q9Y2K1 713 aa16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 SPOPO43791 374 aa16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 CCNE1P24864 410 aa16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 CCDC6Q16204 474 aa16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 CACNA2D3Q8IZS8 1091 aa16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 TC2NQ8N9U0 490 aa16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 FBF1Q8TES7 1133 aa16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 UTYO14607 1347 aa16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 CEMIPQ8WUJ3 1361 aa16.59■□□□□ 0.25
ARHGEF40-207ENST00000556399 LAD1O00515 517 aa16.58■□□□□ 0.25
ARHGEF40-207ENST00000556399 MYL1P05976 194 aa16.58■□□□□ 0.25
ARHGEF40-207ENST00000556399 EIF4A3P38919 411 aaKnown RBP16.58■□□□□ 0.25
ARHGEF40-207ENST00000556399 SGMS1Q86VZ5 419 aa16.58■□□□□ 0.25
ARHGEF40-207ENST00000556399 FBXO2Q9UK22 296 aaPredicted RBP16.58■□□□□ 0.25
ARHGEF40-207ENST00000556399 TRIM49BA6NDI0 452 aa16.58■□□□□ 0.24
ARHGEF40-207ENST00000556399 VSNL1P62760 191 aa16.58■□□□□ 0.24
ARHGEF40-207ENST00000556399 EYA3Q99504 573 aa16.58■□□□□ 0.24
ARHGEF40-207ENST00000556399 NT5C3AQ9H0P0 336 aa16.58■□□□□ 0.24
ARHGEF40-207ENST00000556399 CEP170BQ9Y4F5 1589 aaPredicted RBP16.58■□□□□ 0.24
ARHGEF40-207ENST00000556399 EIF3CLB5ME19 914 aaKnown RBP16.58■□□□□ 0.24
ARHGEF40-207ENST00000556399 LACTBP83111 547 aaPredicted RBP16.58■□□□□ 0.24
ARHGEF40-207ENST00000556399 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
ARHGEF40-207ENST00000556399 EIF3CQ99613 913 aaKnown RBP16.58■□□□□ 0.24
ARHGEF40-207ENST00000556399 H2AFXP16104 143 aaPredicted RBP16.58■□□□□ 0.24
ARHGEF40-207ENST00000556399 GUCY1A2P33402 732 aa16.58■□□□□ 0.24
ARHGEF40-207ENST00000556399 MRPS25P82663 173 aaKnown RBP16.58■□□□□ 0.24
ARHGEF40-207ENST00000556399 CCDC24Q8N4L8 307 aa16.58■□□□□ 0.24
ARHGEF40-207ENST00000556399 UBL4BQ8N7F7 174 aa16.58■□□□□ 0.24
ARHGEF40-207ENST00000556399 A0A1B0GTH6 734 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 BUB1BO60566 1050 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 RFX5P48382 616 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 CLNS1AP54105 237 aaKnown RBP16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 U2AF1L4Q8WU68 220 aaKnown RBP16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 DISC1Q9NRI5 854 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 HDAC6Q9UBN7 1215 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 PCDHA13Q9Y5I0 950 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 LGALS16A8MUM7 142 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 NNTQ13423 1086 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 MAN2A1Q16706 1144 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 GSPT2Q8IYD1 628 aaKnown RBP16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 KAZALD1Q96I82 304 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 AK8Q96MA6 479 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 RAB17Q9H0T7 212 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 NKIRAS1Q9NYS0 192 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 CTTNBP2NLQ9P2B4 639 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 AMFRQ9UKV5 643 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 DNM3Q9UQ16 869 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 CPDO75976 1380 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 FAM170AA1A519 330 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 GGCXP38435 758 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 ANTXR2P58335 489 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 USP37Q86T82 979 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 CERS3Q8IU89 383 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 DPH5Q9H2P9 285 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 PANK4Q9NVE7 773 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 EEF2P13639 858 aaKnown RBP16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 TRAF1Q13077 416 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 SETDB1Q15047 1291 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 ARL6IP4Q66PJ3 421 aaKnown RBP16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 GPBP1Q86WP2 473 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 BICD1Q96G01 975 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 IFT74Q96LB3 600 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 MYCBPQ99417 103 aaPredicted RBP16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 ATP8A2Q9NTI2 1148 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 BAIAP2L1Q9UHR4 511 aa16.57■□□□□ 0.24
ARHGEF40-207ENST00000556399 KIF11P52732 1056 aa16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 RPS8P62241 208 aaKnown RBP16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 IFT88Q13099 833 aa16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 FAM26FQ5R3K3 315 aa16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 DENND2CQ68D51 928 aa16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 REXO1L1PQ8IX06 675 aa16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 PLCB1Q9NQ66 1216 aa16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 ATP5DP30049 168 aa16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 PRCPP42785 496 aa16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 PLA2G4AP47712 749 aa16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 SYNE4Q8N205 404 aa16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 FHOD1Q9Y613 1164 aa16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 XRCC5P13010 732 aaKnown RBP16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 CROCCP2Q86T23 111 aa16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 IKBKGQ9Y6K9 419 aa16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 GCNT3O95395 438 aa16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 GKAP1Q5VSY0 366 aaPredicted RBP16.56■□□□□ 0.24
ARHGEF40-207ENST00000556399 HGSO14964 777 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 PLCG1P19174 1290 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 ALS2CLQ60I27 953 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 TAOK1Q7L7X3 1001 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 LARP4BQ92615 738 aaKnown RBP16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 TTC26A0AVF1 554 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 NR1I3Q14994 352 aa16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 ARMCX3Q9UH62 379 aaPredicted RBP16.55■□□□□ 0.24
ARHGEF40-207ENST00000556399 RTCBQ9Y3I0 505 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms