RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 GLB1P16278 677 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 CD68P34810 354 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-239ENST00000556315 CD97P48960 835 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 ATP11AP98196 1134 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 DNM1Q05193 864 aaKnown RBP6.25□□□□□ -1.41
ATXN3-239ENST00000556315 MAP3K11Q16584 847 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 SLC4A8Q2Y0W8 1093 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 CCDC152Q4G0S7 254 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 DACT2Q5SW24 774 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 STRIP1Q5VSL9 837 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 ATCAYQ86WG3 371 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 ZBTB38Q8NAP3 1195 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-239ENST00000556315 CD99L2Q8TCZ2 262 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 GPR152Q8TDT2 470 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 EDEM1Q92611 657 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 ZNF333Q96JL9 665 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 SPACA7Q96KW9 195 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 SEC31BQ9NQW1 1179 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 PCMTD2Q9NV79 361 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 XDHP47989 1333 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 MAPK8IP3Q9UPT6 1336 aa6.25□□□□□ -1.41
ATXN3-239ENST00000556315 IGF2BP3O00425 579 aaKnown RBP eCLIP6.24□□□□□ -1.41
ATXN3-239ENST00000556315 GSC2O15499 205 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 FZD6O60353 706 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 SMNDC1O75940 238 aaKnown RBP eCLIP6.24□□□□□ -1.41
ATXN3-239ENST00000556315 IGLV1-40P01703 118 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 MAPK1P28482 360 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 CDC27P30260 824 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 RIPK4P57078 832 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 EHHADHQ08426 723 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 CRHR2Q13324 411 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 SUPT20HL1Q3ZLR7 823 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 LCE3BQ5TA77 95 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 TTC39BQ5VTQ0 682 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-239ENST00000556315 CEP135Q66GS9 1140 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 ANKRD18AQ8IVF6 992 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 ZSCAN29Q8IWY8 852 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-239ENST00000556315 ARMC10Q8N2F6 343 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 CEP120Q8N960 986 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 ZBED3Q96IU2 234 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-239ENST00000556315 WNK4Q96J92 1243 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 RBCK1Q9BYM8 510 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 LACRTQ9GZZ8 138 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 DEFB129Q9H1M3 183 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 RASSF4Q9H2L5 321 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 HYPKQ9NX55 129 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 ABI2Q9NYB9 513 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-239ENST00000556315 KCNK4Q9NYG8 393 aa6.24□□□□□ -1.41
ATXN3-239ENST00000556315 DBF4Q9UBU7 674 aaPredicted RBP6.24□□□□□ -1.41
ATXN3-239ENST00000556315 DUOX1Q9NRD9 1551 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 CHL1O00533 1208 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 PDE8AO60658 829 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 SASH1O94885 1247 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 PDGFAP04085 211 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 HOXB7P09629 217 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 MFAP1P55081 439 aaKnown RBP6.23□□□□□ -1.41
ATXN3-239ENST00000556315 LMOD3Q0VAK6 560 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 UVSSAQ2YD98 709 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 SLC9C1Q4G0N8 1177 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 MCTP1Q6DN14 999 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 TTLL5Q6EMB2 1281 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 KLHL23Q8NBE8 558 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 DPF3Q92784 378 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 FAM46AQ96IP4 442 aaKnown RBP6.23□□□□□ -1.41
ATXN3-239ENST00000556315 MXD3Q9BW11 206 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 PBX4Q9BYU1 374 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 CEP41Q9BYV8 373 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 COA1Q9GZY4 146 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 CHPF2Q9P2E5 772 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 STOML1Q9UBI4 398 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 POLIQ9UNA4 740 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 PPP2R3BQ9Y5P8 575 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 PAPPA2Q9BXP8 1791 aa6.23□□□□□ -1.41
ATXN3-239ENST00000556315 WTIPA6NIX2 430 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-239ENST00000556315 KIAA1324LA8MWY0 1029 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-239ENST00000556315 FSCN2O14926 492 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 USP2O75604 605 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-239ENST00000556315 WDHD1O75717 1129 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-239ENST00000556315 MED26O95402 600 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 PCCAP05165 728 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-239ENST00000556315 CYP2E1P05181 493 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-239ENST00000556315 ERCC3P19447 782 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 SSTR4P31391 388 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 DLGAP5Q15398 846 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 PDE12Q6L8Q7 609 aaKnown RBP6.22□□□□□ -1.41
ATXN3-239ENST00000556315 TXNDC11Q6PKC3 985 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 KIAA1211Q6ZU35 1233 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 KIAA0825Q8IV33 1275 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 ANKRD13AQ8IZ07 590 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 CCDC191Q8NCU4 936 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 CLMNQ96JQ2 1002 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 CDC5LQ99459 802 aaKnown RBP6.22□□□□□ -1.41
ATXN3-239ENST00000556315 PTPN18Q99952 460 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 ADAM19Q9H013 955 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 ZFYVE28Q9HCC9 887 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 BSDC1Q9NW68 430 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-239ENST00000556315 MINPP1Q9UNW1 487 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 FZD1Q9UP38 647 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 LEMD3Q9Y2U8 911 aa6.22□□□□□ -1.41
ATXN3-239ENST00000556315 PTCH2Q9Y6C5 1203 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms