RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 BARHL2Q9NY43 387 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 PCDHA6Q9UN73 950 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 PCDHA8Q9Y5H6 950 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 AKR1B1P15121 316 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 USP8P40818 1118 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 DPYDQ12882 1025 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 GRM4Q14833 912 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 ARL6IP4Q66PJ3 421 aaKnown RBP16.54■□□□□ 0.24
NEK9-209ENST00000556170 TTBK2Q6IQ55 1244 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 OGFOD1Q8N543 542 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 DDX25Q9UHL0 483 aaKnown RBP16.54■□□□□ 0.24
NEK9-209ENST00000556170 FAM205AQ6ZU69 1335 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 USP17L15C9J2P7 530 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 USP17L13C9JLJ4 530 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 USP17L11C9JVI0 530 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 USP17L18D6R9N7 530 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 USP17L22D6RA61 530 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 USP17L17D6RBQ6 530 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 USP17L19D6RCP7 530 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 USP17L20D6RJB6 530 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 TDP2O95551 362 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 FCER1AP12319 257 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 USP17L24Q0WX57 530 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 USP17L6PQ6QN14 398 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 NAA15Q9BXJ9 866 aaKnown RBP16.54■□□□□ 0.24
NEK9-209ENST00000556170 LRRC27Q9C0I9 530 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 GBP3Q9H0R5 595 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 KIAA1024Q9UPX6 916 aa16.54■□□□□ 0.24
NEK9-209ENST00000556170 DNM2P50570 870 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 CERKLQ49MI3 558 aaPredicted RBP16.53■□□□□ 0.24
NEK9-209ENST00000556170 TAF4BQ92750 862 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 ALS2CR12Q96Q35 445 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 EFCAB8A8MWE9 144 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 TACC1O75410 805 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 UBXN2AP68543 259 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 TRIM14Q14142 442 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 LEKR1Q6ZMV7 388 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 ERMNQ8TAM6 284 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 PPARDQ03181 441 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 GALNT17Q6IS24 598 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 LRRN4CLQ8ND94 238 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 LARP4BQ92615 738 aaKnown RBP16.53■□□□□ 0.24
NEK9-209ENST00000556170 P2RX5Q93086 422 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 MRPL44Q9H9J2 332 aaKnown RBP16.53■□□□□ 0.24
NEK9-209ENST00000556170 KANSL2Q9H9L4 492 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 IL17RBQ9NRM6 502 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 PRDM4Q9UKN5 801 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 MEIS1O00470 390 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 ZMYND10O75800 440 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 TTLL1O95922 423 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 MMP10P09238 476 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 VPS72Q15906 364 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 SLFN13Q68D06 897 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 CCDC65Q8IXS2 484 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 SYCP3Q8IZU3 236 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 TBC1D16Q8TBP0 767 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 GJD4Q96KN9 370 aaPredicted RBP16.53■□□□□ 0.24
NEK9-209ENST00000556170 AFF2P51816 1311 aa16.53■□□□□ 0.24
NEK9-209ENST00000556170 CHP1Q99653 195 aa16.52■□□□□ 0.24
NEK9-209ENST00000556170 VPS18Q9P253 973 aa16.52■□□□□ 0.24
NEK9-209ENST00000556170 CLRN2A0PK11 232 aa16.52■□□□□ 0.23
NEK9-209ENST00000556170 DDX39AO00148 427 aaKnown RBP16.52■□□□□ 0.23
NEK9-209ENST00000556170 SLURP2P0DP57 97 aa16.52■□□□□ 0.23
NEK9-209ENST00000556170 SBK1Q52WX2 424 aa16.52■□□□□ 0.23
NEK9-209ENST00000556170 CCDC174Q6PII3 467 aa16.52■□□□□ 0.23
NEK9-209ENST00000556170 RAD9BQ6WBX8 426 aa16.52■□□□□ 0.23
NEK9-209ENST00000556170 SMCR8Q8TEV9 937 aaPredicted RBP16.52■□□□□ 0.23
NEK9-209ENST00000556170 PHLPP2Q6ZVD8 1323 aa16.52■□□□□ 0.23
NEK9-209ENST00000556170 TCP10L2B9ZVM9 353 aa16.52■□□□□ 0.23
NEK9-209ENST00000556170 NR1I3Q14994 352 aa16.52■□□□□ 0.23
NEK9-209ENST00000556170 CT47A1Q5JQC4 288 aaPredicted RBP16.52■□□□□ 0.23
NEK9-209ENST00000556170 SLC10A5Q5PT55 438 aa16.52■□□□□ 0.23
NEK9-209ENST00000556170 IQCEQ6IPM2 695 aa16.52■□□□□ 0.23
NEK9-209ENST00000556170 GPBP1Q86WP2 473 aa16.52■□□□□ 0.23
NEK9-209ENST00000556170 ST7Q9NRC1 585 aa16.52■□□□□ 0.23
NEK9-209ENST00000556170 TRPC5Q9UL62 973 aaPredicted RBP16.52■□□□□ 0.23
NEK9-209ENST00000556170 TFR2Q9UP52 801 aa16.52■□□□□ 0.23
NEK9-209ENST00000556170 ADGRG1Q9Y653 693 aa16.52■□□□□ 0.23
NEK9-209ENST00000556170 TTC26A0AVF1 554 aa16.51■□□□□ 0.23
NEK9-209ENST00000556170 USP17L10C9JJH3 530 aa16.51■□□□□ 0.23
NEK9-209ENST00000556170 MAGEA1P43355 309 aa16.51■□□□□ 0.23
NEK9-209ENST00000556170 UTP14CQ5TAP6 766 aaKnown RBP16.51■□□□□ 0.23
NEK9-209ENST00000556170 EHBP1Q8NDI1 1231 aa16.51■□□□□ 0.23
NEK9-209ENST00000556170 ADD3Q9UEY8 706 aaKnown RBP16.51■□□□□ 0.23
NEK9-209ENST00000556170 FLT1P17948 1338 aa16.51■□□□□ 0.23
NEK9-209ENST00000556170 H0YIN7 160 aa16.51■□□□□ 0.23
NEK9-209ENST00000556170 MRPS25P82663 173 aaKnown RBP16.51■□□□□ 0.23
NEK9-209ENST00000556170 ICA1Q05084 483 aa16.51■□□□□ 0.23
NEK9-209ENST00000556170 NEDD1Q8NHV4 660 aa16.51■□□□□ 0.23
NEK9-209ENST00000556170 CTIFO43310 598 aaKnown RBP16.51■□□□□ 0.23
NEK9-209ENST00000556170 PPP1R12BO60237 982 aaPredicted RBP16.51■□□□□ 0.23
NEK9-209ENST00000556170 PRPF4BQ13523 1007 aaKnown RBP16.51■□□□□ 0.23
NEK9-209ENST00000556170 RC3H1Q5TC82 1133 aaKnown RBP16.51■□□□□ 0.23
NEK9-209ENST00000556170 CCDC51Q96ER9 411 aa16.51■□□□□ 0.23
NEK9-209ENST00000556170 KCPQ6ZWJ8 1503 aa16.51■□□□□ 0.23
NEK9-209ENST00000556170 A0A1B0GTH6 734 aa16.5■□□□□ 0.23
NEK9-209ENST00000556170 PPP1R3GB7ZBB8 358 aa16.5■□□□□ 0.23
NEK9-209ENST00000556170 PABPC4Q13310 644 aaKnown RBP eCLIP16.5■□□□□ 0.23
NEK9-209ENST00000556170 CPXCR1Q8N123 301 aa16.5■□□□□ 0.23
NEK9-209ENST00000556170 FNBP4Q8N3X1 1017 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms