RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 TIMP1P01033 207 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 CSF2RAP15509 400 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 STAT3P40763 770 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 GABPAQ06546 454 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 PPIGQ13427 754 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHGA-205ENST00000556098 SKIV2LQ15477 1246 aaKnown RBP12.93□□□□□ -0.34
CHGA-205ENST00000556098 NFKBIBQ15653 356 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 ADCK5Q3MIX3 580 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 FAM83BQ5T0W9 1011 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 CCDC174Q6PII3 467 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 AMOTL1Q8IY63 956 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 GLT1D1Q96MS3 346 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 STRBPQ96SI9 672 aaKnown RBP12.93□□□□□ -0.34
CHGA-205ENST00000556098 UHRF1Q96T88 793 aaPredicted RBP12.93□□□□□ -0.34
CHGA-205ENST00000556098 AGXT2Q9BYV1 514 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 NKX2-4Q9H2Z4 354 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 CNNM2Q9H8M5 875 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 SWAP70Q9UH65 585 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 MSRAQ9UJ68 235 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 FAM184BQ9ULE4 1060 aa12.93□□□□□ -0.34
CHGA-205ENST00000556098 GREB1LQ9C091 1923 aaPredicted RBP12.93□□□□□ -0.34
CHGA-205ENST00000556098 GOLGA6L22H0YM25 854 aa12.92□□□□□ -0.34
CHGA-205ENST00000556098 SMIM22K7EJ46 135 aa12.92□□□□□ -0.34
CHGA-205ENST00000556098 PRKAB2O43741 272 aa12.92□□□□□ -0.34
CHGA-205ENST00000556098 ADAMTS4O75173 837 aa12.92□□□□□ -0.34
CHGA-205ENST00000556098 ZNF865P0CJ78 1059 aaPredicted RBP12.92□□□□□ -0.34
CHGA-205ENST00000556098 EEF2P13639 858 aaKnown RBP12.92□□□□□ -0.34
CHGA-205ENST00000556098 TRDNQ13061 729 aa12.92□□□□□ -0.34
CHGA-205ENST00000556098 SLFNL1Q499Z3 407 aa12.92□□□□□ -0.34
CHGA-205ENST00000556098 ZNF365Q70YC5 407 aa12.92□□□□□ -0.34
CHGA-205ENST00000556098 NOL8Q76FK4 1167 aaKnown RBP12.92□□□□□ -0.34
CHGA-205ENST00000556098 CPXCR1Q8N123 301 aa12.92□□□□□ -0.34
CHGA-205ENST00000556098 TMEM199Q8N511 208 aa12.92□□□□□ -0.34
CHGA-205ENST00000556098 NCOA7Q8NI08 942 aa12.92□□□□□ -0.34
CHGA-205ENST00000556098 FAM122AQ96E09 287 aa12.92□□□□□ -0.34
CHGA-205ENST00000556098 NUP88Q99567 741 aaPredicted RBP12.92□□□□□ -0.34
CHGA-205ENST00000556098 GOPCQ9HD26 462 aa12.92□□□□□ -0.34
CHGA-205ENST00000556098 DCP1AQ9NPI6 582 aaPredicted RBP12.92□□□□□ -0.34
CHGA-205ENST00000556098 TMX2Q9Y320 296 aa12.92□□□□□ -0.34
CHGA-205ENST00000556098 E7EWF7 191 aa12.91□□□□□ -0.34
CHGA-205ENST00000556098 TLR3O15455 904 aaKnown RBP12.91□□□□□ -0.34
CHGA-205ENST00000556098 MBD4O95243 580 aa12.91□□□□□ -0.34
CHGA-205ENST00000556098 FGAP02671 866 aa12.91□□□□□ -0.34
CHGA-205ENST00000556098 MRPS5P82675 430 aaKnown RBP12.91□□□□□ -0.34
CHGA-205ENST00000556098 ZNF792Q3KQV3 632 aa12.91□□□□□ -0.34
CHGA-205ENST00000556098 SNRNP48Q6IEG0 339 aaKnown RBP12.91□□□□□ -0.34
CHGA-205ENST00000556098 MFSD5Q6N075 450 aa12.91□□□□□ -0.34
CHGA-205ENST00000556098 RALYLQ86SE5 291 aaKnown RBP12.91□□□□□ -0.34
CHGA-205ENST00000556098 RIOX2Q8IUF8 465 aa12.91□□□□□ -0.34
CHGA-205ENST00000556098 NECAB3Q96P71 396 aaPredicted RBP12.91□□□□□ -0.34
CHGA-205ENST00000556098 ASB2Q96Q27 587 aa12.91□□□□□ -0.34
CHGA-205ENST00000556098 RNF41Q9H4P4 317 aaPredicted RBP12.91□□□□□ -0.34
CHGA-205ENST00000556098 SPC25Q9HBM1 224 aa12.91□□□□□ -0.34
CHGA-205ENST00000556098 KIF3AQ9Y496 699 aa12.91□□□□□ -0.34
CHGA-205ENST00000556098 COL4A4P53420 1690 aaPredicted RBP12.91□□□□□ -0.34
CHGA-205ENST00000556098 MROH7Q68CQ1 1323 aa12.9□□□□□ -0.34
CHGA-205ENST00000556098 MOXD2PA6NHM9 499 aa12.9□□□□□ -0.34
CHGA-205ENST00000556098 VWA5AO00534 786 aa12.9□□□□□ -0.34
CHGA-205ENST00000556098 ASGR1P07306 291 aa12.9□□□□□ -0.34
CHGA-205ENST00000556098 PDCP20941 246 aa12.9□□□□□ -0.34
CHGA-205ENST00000556098 CYP2C18P33260 490 aa12.9□□□□□ -0.34
CHGA-205ENST00000556098 MCM5P33992 734 aa12.9□□□□□ -0.34
CHGA-205ENST00000556098 TMEM240Q5SV17 173 aa12.9□□□□□ -0.34
CHGA-205ENST00000556098 ANKRD33Q7Z3H0 272 aa12.9□□□□□ -0.34
CHGA-205ENST00000556098 RGS22Q8NE09 1264 aa12.9□□□□□ -0.34
CHGA-205ENST00000556098 ATXN2LQ8WWM7 1075 aaKnown RBP12.9□□□□□ -0.34
CHGA-205ENST00000556098 LLPHQ9BRT6 129 aaKnown RBP12.9□□□□□ -0.34
CHGA-205ENST00000556098 TSEN34Q9BSV6 310 aaKnown RBP12.9□□□□□ -0.34
CHGA-205ENST00000556098 NAPBQ9H115 298 aa12.9□□□□□ -0.34
CHGA-205ENST00000556098 TSPYL2Q9H2G4 693 aaPredicted RBP12.9□□□□□ -0.34
CHGA-205ENST00000556098 SLC28A3Q9HAS3 691 aa12.9□□□□□ -0.34
CHGA-205ENST00000556098 NRBP1Q9UHY1 535 aa12.9□□□□□ -0.34
CHGA-205ENST00000556098 PPP1R9AQ9ULJ8 1098 aa12.9□□□□□ -0.34
CHGA-205ENST00000556098 MYH15Q9Y2K3 1946 aa12.9□□□□□ -0.35
CHGA-205ENST00000556098 TRIP12Q14669 1992 aaPredicted RBP12.89□□□□□ -0.35
CHGA-205ENST00000556098 ZBBXA8MT70 800 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 FOXP2O15409 715 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 CDK8P49336 464 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 RABGGTBP53611 331 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 EVCP57679 992 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 FGD1P98174 961 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 BEX3Q00994 111 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 ADGRE1Q14246 886 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 GNASQ5JWF2 1037 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 PSRC1Q6PGN9 363 aaPredicted RBP12.89□□□□□ -0.35
CHGA-205ENST00000556098 OTOP2Q7RTS6 562 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 SIAH1Q8IUQ4 282 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 SPRYD3Q8NCJ5 442 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 TOX2Q96NM4 488 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 KRT23Q9C075 422 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 MTIF3Q9H2K0 278 aaKnown RBP12.89□□□□□ -0.35
CHGA-205ENST00000556098 HOMER2Q9NSB8 354 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 TBX21Q9UL17 535 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 SMC3Q9UQE7 1217 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 ATP6V1DQ9Y5K8 247 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 LCTP09848 1927 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 TANC1Q9C0D5 1861 aa12.89□□□□□ -0.35
CHGA-205ENST00000556098 PTPRSQ13332 1948 aa12.88□□□□□ -0.35
CHGA-205ENST00000556098 A0A0U1RQG5 324 aaPredicted RBP12.88□□□□□ -0.35
CHGA-205ENST00000556098 APPP05067 770 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms