RNA–Protein interactions for RNA: ENST00000555962.5

CHD8-210, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-210ENST00000555962 MAD2L2Q9UI95 211 aa10.48□□□□□ -0.73
CHD8-210ENST00000555962 ZNF214Q9UL59 606 aaPredicted RBP10.48□□□□□ -0.73
CHD8-210ENST00000555962 PALM3A6NDB9 673 aaPredicted RBP10.47□□□□□ -0.73
CHD8-210ENST00000555962 EIF5BO60841 1220 aaKnown RBP10.47□□□□□ -0.73
CHD8-210ENST00000555962 HMGB1P09429 215 aaKnown RBP10.47□□□□□ -0.73
CHD8-210ENST00000555962 PARP1P09874 1014 aaKnown RBP10.47□□□□□ -0.73
CHD8-210ENST00000555962 RXRAP19793 462 aa10.47□□□□□ -0.73
CHD8-210ENST00000555962 PSMA5P28066 241 aa10.47□□□□□ -0.73
CHD8-210ENST00000555962 ANAPC15P60006 121 aa10.47□□□□□ -0.73
CHD8-210ENST00000555962 IKQ13123 557 aaPredicted RBP10.47□□□□□ -0.73
CHD8-210ENST00000555962 PLS1Q14651 629 aa10.47□□□□□ -0.73
CHD8-210ENST00000555962 KIF22Q14807 665 aa10.47□□□□□ -0.73
CHD8-210ENST00000555962 SLC35G1Q2M3R5 365 aa10.47□□□□□ -0.73
CHD8-210ENST00000555962 SYDE2Q5VT97 1194 aa10.47□□□□□ -0.73
CHD8-210ENST00000555962 RUFY3Q7L099 469 aa10.47□□□□□ -0.73
CHD8-210ENST00000555962 OTOP1Q7RTM1 612 aa10.47□□□□□ -0.73
CHD8-210ENST00000555962 CTU1Q7Z7A3 348 aaKnown RBP10.47□□□□□ -0.73
CHD8-210ENST00000555962 ZNF454Q8N9F8 522 aa10.47□□□□□ -0.73
CHD8-210ENST00000555962 ZDHHC16Q969W1 377 aa10.47□□□□□ -0.73
CHD8-210ENST00000555962 IL17RAQ96F46 866 aa10.47□□□□□ -0.73
CHD8-210ENST00000555962 UPF3BQ9BZI7 483 aaKnown RBP10.47□□□□□ -0.73
CHD8-210ENST00000555962 UBA5Q9GZZ9 404 aa10.47□□□□□ -0.73
CHD8-210ENST00000555962 RAVER2Q9HCJ3 691 aaKnown RBP10.47□□□□□ -0.73
CHD8-210ENST00000555962 BRPF3Q9ULD4 1205 aa10.47□□□□□ -0.73
CHD8-210ENST00000555962 TRIM17Q9Y577 477 aa10.47□□□□□ -0.73
CHD8-210ENST00000555962 ZNF536O15090 1300 aa10.47□□□□□ -0.73
CHD8-210ENST00000555962 CENPFP49454 3210 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 CCDC69A6NI79 296 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 TNPO2O14787 897 aaKnown RBP10.46□□□□□ -0.73
CHD8-210ENST00000555962 ATP2A1O14983 1001 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 ZBED4O75132 1171 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 DDAH1O94760 285 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 FMNL1O95466 1100 aaPredicted RBP10.46□□□□□ -0.73
CHD8-210ENST00000555962 TAL1P17542 331 aaPredicted RBP10.46□□□□□ -0.73
CHD8-210ENST00000555962 STAT3P40763 770 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 FCGRTP55899 365 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 ASPRV1Q53RT3 343 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 GPATCH4Q5T3I0 446 aaKnown RBP10.46□□□□□ -0.73
CHD8-210ENST00000555962 APOA5Q6Q788 366 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 NFXL1Q6ZNB6 911 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 GPR142Q7Z601 462 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 CATIPQ7Z7H3 387 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 NBPF11Q86T75 865 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 RIOX2Q8IUF8 465 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 CPXCR1Q8N123 301 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 TMTC2Q8N394 836 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 NUP133Q8WUM0 1156 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 BRF1Q92994 677 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 AGXT2Q9BYV1 514 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 RANBP17Q9H2T7 1088 aaKnown RBP10.46□□□□□ -0.73
CHD8-210ENST00000555962 RBM27Q9P2N5 1060 aaKnown RBP10.46□□□□□ -0.73
CHD8-210ENST00000555962 GABRQQ9UN88 632 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 RIPK3Q9Y572 518 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 CYP46A1Q9Y6A2 500 aa10.46□□□□□ -0.73
CHD8-210ENST00000555962 KLRF2D3W0D1 207 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 FDX1P10109 184 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 ERCC3P19447 782 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 MAPK4P31152 587 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 CCNA1P78396 465 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 PRKCZQ05513 592 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 APOBRQ0VD83 1088 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 TOB2Q14106 344 aaPredicted RBP10.45□□□□□ -0.74
CHD8-210ENST00000555962 SNRNP48Q6IEG0 339 aaKnown RBP10.45□□□□□ -0.74
CHD8-210ENST00000555962 CCDC174Q6PII3 467 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 PLEKHH3Q7Z736 793 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 CCDC144CPQ8IYA2 1237 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 ADGRF4Q8IZF3 695 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 FBXL16Q8N461 479 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 TTC13Q8NBP0 860 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 SHCBP1Q8NEM2 672 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 AGBL1Q96MI9 1066 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 KIF2CQ99661 725 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 TEX13BQ9BXU2 312 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 BACH2Q9BYV9 841 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 JMJD4Q9H9V9 463 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 SRRDQ9UH36 339 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 GJD2Q9UKL4 321 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 PTPN22Q9Y2R2 807 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 SLC12A7Q9Y666 1083 aa10.45□□□□□ -0.74
CHD8-210ENST00000555962 KIAA0100Q14667 2235 aaKnown RBP10.45□□□□□ -0.74
CHD8-210ENST00000555962 KLF18A0A0U1RQI7 1052 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 CYTH3O43739 400 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 PLEKHA8P1O95397 391 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 GNRH1P01148 92 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 SLC4A3P48751 1232 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 OAZ1P54368 228 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 FGD1P98174 961 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 ARHGEF6Q15052 776 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 WDR78Q5VTH9 848 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 MYSM1Q5VVJ2 828 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 MICU3Q86XE3 530 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 NCAPG2Q86XI2 1143 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 COA7Q96BR5 231 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 MAP3K14Q99558 947 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 C22orf23Q9BZE7 217 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 MCOLN1Q9GZU1 580 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 MROH8Q9H579 483 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 VAT1LQ9HCJ6 419 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 HPS5Q9UPZ3 1129 aa10.44□□□□□ -0.74
CHD8-210ENST00000555962 CTDP1Q9Y5B0 961 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms