RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 ESYT2A0FGR8 921 aa12.67□□□□□ -0.38
TMEM260-208ENST00000555905 TESPA1A2RU30 521 aaPredicted RBP12.67□□□□□ -0.38
TMEM260-208ENST00000555905 SMCO2A6NFE2 343 aa12.67□□□□□ -0.38
TMEM260-208ENST00000555905 BTBD19C9JJ37 291 aa12.67□□□□□ -0.38
TMEM260-208ENST00000555905 PDHXO00330 501 aa12.67□□□□□ -0.38
TMEM260-208ENST00000555905 F13A1P00488 732 aa12.67□□□□□ -0.38
TMEM260-208ENST00000555905 ADCY7P51828 1080 aa12.67□□□□□ -0.38
TMEM260-208ENST00000555905 HERVK_113P62684 666 aa12.67□□□□□ -0.38
TMEM260-208ENST00000555905 SREBF2Q12772 1141 aa12.67□□□□□ -0.38
TMEM260-208ENST00000555905 FERMT3Q86UX7 667 aa12.67□□□□□ -0.38
TMEM260-208ENST00000555905 DIS3L2Q8IYB7 885 aaKnown RBP12.67□□□□□ -0.38
TMEM260-208ENST00000555905 CPXCR1Q8N123 301 aa12.67□□□□□ -0.38
TMEM260-208ENST00000555905 GTF3C2Q8WUA4 911 aaPredicted RBP12.67□□□□□ -0.38
TMEM260-208ENST00000555905 CUL5Q93034 780 aa12.67□□□□□ -0.38
TMEM260-208ENST00000555905 P2RX7Q99572 595 aaKnown RBP12.67□□□□□ -0.38
TMEM260-208ENST00000555905 ZMYND12Q9H0C1 365 aa12.67□□□□□ -0.38
TMEM260-208ENST00000555905 FOXP1Q9H334 677 aaPredicted RBP12.67□□□□□ -0.38
TMEM260-208ENST00000555905 RAVER2Q9HCJ3 691 aaKnown RBP12.67□□□□□ -0.38
TMEM260-208ENST00000555905 PCDHA4Q9UN74 947 aa12.67□□□□□ -0.38
TMEM260-208ENST00000555905 ZDHHC9Q9Y397 364 aa12.67□□□□□ -0.38
TMEM260-208ENST00000555905 MRPL11Q9Y3B7 192 aaKnown RBP12.67□□□□□ -0.38
TMEM260-208ENST00000555905 A0A0G2JMZ2 1700 aa12.66□□□□□ -0.38
TMEM260-208ENST00000555905 FAM155AB1AL88 458 aaPredicted RBP12.66□□□□□ -0.38
TMEM260-208ENST00000555905 ATP2A1O14983 1001 aa12.66□□□□□ -0.38
TMEM260-208ENST00000555905 MRPL12P52815 198 aaKnown RBP12.66□□□□□ -0.38
TMEM260-208ENST00000555905 KIF23Q02241 960 aaPredicted RBP12.66□□□□□ -0.38
TMEM260-208ENST00000555905 GRM1Q13255 1194 aa12.66□□□□□ -0.38
TMEM260-208ENST00000555905 DEFB115Q30KQ5 88 aa12.66□□□□□ -0.38
TMEM260-208ENST00000555905 TYW1BQ6NUM6 668 aa12.66□□□□□ -0.38
TMEM260-208ENST00000555905 LBX2Q6XYB7 198 aa12.66□□□□□ -0.38
TMEM260-208ENST00000555905 BRAPQ7Z569 592 aa12.66□□□□□ -0.38
TMEM260-208ENST00000555905 BLIDQ8IZY5 108 aa12.66□□□□□ -0.38
TMEM260-208ENST00000555905 DAGLBQ8NCG7 672 aa12.66□□□□□ -0.38
TMEM260-208ENST00000555905 SMCR8Q8TEV9 937 aaPredicted RBP12.66□□□□□ -0.38
TMEM260-208ENST00000555905 SHISA4Q96DD7 197 aa12.66□□□□□ -0.38
TMEM260-208ENST00000555905 AGBL1Q96MI9 1066 aa12.66□□□□□ -0.38
TMEM260-208ENST00000555905 TEX13BQ9BXU2 312 aa12.66□□□□□ -0.38
TMEM260-208ENST00000555905 PSTPIP2Q9H939 334 aa12.66□□□□□ -0.38
TMEM260-208ENST00000555905 RIC8AQ9NPQ8 531 aa12.66□□□□□ -0.38
TMEM260-208ENST00000555905 ZNF536O15090 1300 aa12.65□□□□□ -0.38
TMEM260-208ENST00000555905 RASSF10A6NK89 507 aa12.65□□□□□ -0.38
TMEM260-208ENST00000555905 BTBD18B2RXH4 712 aa12.65□□□□□ -0.38
TMEM260-208ENST00000555905 ALAS1P13196 640 aa12.65□□□□□ -0.38
TMEM260-208ENST00000555905 U2AF2P26368 475 aaKnown RBP eCLIP12.65□□□□□ -0.38
TMEM260-208ENST00000555905 RESTQ13127 1097 aa12.65□□□□□ -0.38
TMEM260-208ENST00000555905 PLS1Q14651 629 aa12.65□□□□□ -0.38
TMEM260-208ENST00000555905 TMEM132BQ14DG7 1078 aa12.65□□□□□ -0.38
TMEM260-208ENST00000555905 TKFCQ3LXA3 575 aa12.65□□□□□ -0.38
TMEM260-208ENST00000555905 SNRNP48Q6IEG0 339 aaKnown RBP12.65□□□□□ -0.38
TMEM260-208ENST00000555905 CYP4F22Q6NT55 531 aa12.65□□□□□ -0.38
TMEM260-208ENST00000555905 NOSTRINQ8IVI9 506 aa12.65□□□□□ -0.38
TMEM260-208ENST00000555905 TEX2Q8IWB9 1127 aa12.65□□□□□ -0.38
TMEM260-208ENST00000555905 FAM43AQ8N2R8 423 aa12.65□□□□□ -0.38
TMEM260-208ENST00000555905 REPS2Q8NFH8 660 aa12.65□□□□□ -0.38
TMEM260-208ENST00000555905 PARK7Q99497 189 aaKnown RBP12.65□□□□□ -0.38
TMEM260-208ENST00000555905 ZCCHC17Q9NP64 241 aaKnown RBP12.65□□□□□ -0.38
TMEM260-208ENST00000555905 RABGAP1Q9Y3P9 1069 aa12.65□□□□□ -0.38
TMEM260-208ENST00000555905 CYP2C8P10632 490 aa12.64□□□□□ -0.39
TMEM260-208ENST00000555905 STAT3P40763 770 aa12.64□□□□□ -0.39
TMEM260-208ENST00000555905 GCLCP48506 637 aaPredicted RBP12.64□□□□□ -0.39
TMEM260-208ENST00000555905 NOGQ13253 232 aa12.64□□□□□ -0.39
TMEM260-208ENST00000555905 NPY5RQ15761 445 aa12.64□□□□□ -0.39
TMEM260-208ENST00000555905 MCTP2Q6DN12 878 aa12.64□□□□□ -0.39
TMEM260-208ENST00000555905 MCF2L2Q86YR7 1114 aa12.64□□□□□ -0.39
TMEM260-208ENST00000555905 REXO1Q8N1G1 1221 aaKnown RBP12.64□□□□□ -0.39
TMEM260-208ENST00000555905 OXER1Q8TDS5 423 aa12.64□□□□□ -0.39
TMEM260-208ENST00000555905 TNPO1Q92973 898 aaKnown RBP12.64□□□□□ -0.39
TMEM260-208ENST00000555905 CAPNS2Q96L46 248 aa12.64□□□□□ -0.39
TMEM260-208ENST00000555905 TRERF1Q96PN7 1200 aa12.64□□□□□ -0.39
TMEM260-208ENST00000555905 PTPN18Q99952 460 aa12.64□□□□□ -0.39
TMEM260-208ENST00000555905 PAGR1Q9BTK6 254 aa12.64□□□□□ -0.39
TMEM260-208ENST00000555905 ZNF214Q9UL59 606 aaPredicted RBP12.64□□□□□ -0.39
TMEM260-208ENST00000555905 MYH15Q9Y2K3 1946 aa12.64□□□□□ -0.39
TMEM260-208ENST00000555905 RBBP6Q7Z6E9 1792 aaKnown RBP12.64□□□□□ -0.39
TMEM260-208ENST00000555905 SMCHD1A6NHR9 2005 aa12.63□□□□□ -0.39
TMEM260-208ENST00000555905 CCDC194A0A1B0GVG4 234 aa12.63□□□□□ -0.39
TMEM260-208ENST00000555905 KIF28PB7ZC32 967 aa12.63□□□□□ -0.39
TMEM260-208ENST00000555905 TAL1P17542 331 aaPredicted RBP12.63□□□□□ -0.39
TMEM260-208ENST00000555905 COPB2P35606 906 aa12.63□□□□□ -0.39
TMEM260-208ENST00000555905 NR5A1Q13285 461 aa12.63□□□□□ -0.39
TMEM260-208ENST00000555905 KRT25Q7Z3Z0 450 aa12.63□□□□□ -0.39
TMEM260-208ENST00000555905 IFNL1Q8IU54 200 aa12.63□□□□□ -0.39
TMEM260-208ENST00000555905 SAMD3Q8N6K7 520 aa12.63□□□□□ -0.39
TMEM260-208ENST00000555905 SPATC1LQ9H0A9 340 aa12.63□□□□□ -0.39
TMEM260-208ENST00000555905 HOMER2Q9NSB8 354 aa12.63□□□□□ -0.39
TMEM260-208ENST00000555905 BTBD7Q9P203 1132 aa12.63□□□□□ -0.39
TMEM260-208ENST00000555905 PCDHA6Q9UN73 950 aa12.63□□□□□ -0.39
TMEM260-208ENST00000555905 PCDHA8Q9Y5H6 950 aa12.63□□□□□ -0.39
TMEM260-208ENST00000555905 GCOM1H8Y6P7 765 aaPredicted RBP12.62□□□□□ -0.39
TMEM260-208ENST00000555905 PIK3CDO00329 1044 aa12.62□□□□□ -0.39
TMEM260-208ENST00000555905 IGF2BP3O00425 579 aaKnown RBP eCLIP12.62□□□□□ -0.39
TMEM260-208ENST00000555905 SLC25A27O95847 323 aa12.62□□□□□ -0.39
TMEM260-208ENST00000555905 POLR2MP0CAP2 368 aa12.62□□□□□ -0.39
TMEM260-208ENST00000555905 TM4SF4P48230 202 aa12.62□□□□□ -0.39
TMEM260-208ENST00000555905 UBE2SQ16763 222 aa12.62□□□□□ -0.39
TMEM260-208ENST00000555905 FOXD4L6Q3SYB3 417 aaPredicted RBP12.62□□□□□ -0.39
TMEM260-208ENST00000555905 FOXD4L3Q6VB84 417 aaPredicted RBP12.62□□□□□ -0.39
TMEM260-208ENST00000555905 RIOX2Q8IUF8 465 aa12.62□□□□□ -0.39
TMEM260-208ENST00000555905 CHST13Q8NET6 341 aa12.62□□□□□ -0.39
TMEM260-208ENST00000555905 GPRC5AQ8NFJ5 357 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms