RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 XDHP47989 1333 aa7.99□□□□□ -1.13
SLIRP-204ENST00000555890 GVINP1Q7Z2Y8 2422 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 PRR23AA6NEV1 266 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 ECE2O60344 883 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 FMNL1O95466 1100 aaPredicted RBP7.98□□□□□ -1.13
SLIRP-204ENST00000555890 CYP7A1P22680 504 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 IGFBP4P22692 258 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 CTHP32929 405 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 TRDNQ13061 729 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 ALX1Q15699 326 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 ME3Q16798 604 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 EML3Q32P44 896 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 SPTY2D1Q68D10 685 aaPredicted RBP7.98□□□□□ -1.13
SLIRP-204ENST00000555890 Q6ZUG5 572 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 RALYLQ86SE5 291 aaKnown RBP7.98□□□□□ -1.13
SLIRP-204ENST00000555890 TRIM50Q86XT4 487 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 CCDC83Q8IWF9 413 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 ANKLE1Q8NAG6 615 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 NCOA7Q8NI08 942 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 C1orf216Q8TAB5 229 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 STRBPQ96SI9 672 aaKnown RBP7.98□□□□□ -1.13
SLIRP-204ENST00000555890 ABCF2Q9UG63 623 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 PCDHB9Q9Y5E1 797 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 ZMYM6O95789 1325 aa7.98□□□□□ -1.13
SLIRP-204ENST00000555890 BHMG1C9JSJ3 638 aaPredicted RBP7.97□□□□□ -1.13
SLIRP-204ENST00000555890 MBD4O95243 580 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 BAG4O95429 457 aaKnown RBP7.97□□□□□ -1.13
SLIRP-204ENST00000555890 PDCP20941 246 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 MCM5P33992 734 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 SERPINB4P48594 390 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 ATP1A2P50993 1020 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 EXOSC10Q01780 885 aaKnown RBP7.97□□□□□ -1.13
SLIRP-204ENST00000555890 DPYDQ12882 1025 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 TOB2Q14106 344 aaPredicted RBP7.97□□□□□ -1.13
SLIRP-204ENST00000555890 LAPTM4AQ15012 233 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 TTLL5Q6EMB2 1281 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 C15orf52Q6ZUT6 534 aaKnown RBP7.97□□□□□ -1.13
SLIRP-204ENST00000555890 STOX1Q6ZVD7 989 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 ZNF804AQ7Z570 1209 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 IFNL3Q8IZI9 196 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 OGFOD1Q8N543 542 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 MRRFQ96E11 262 aaKnown RBP7.97□□□□□ -1.13
SLIRP-204ENST00000555890 PTPN18Q99952 460 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 NAPBQ9H115 298 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 TMX4Q9H1E5 349 aaPredicted RBP7.97□□□□□ -1.13
SLIRP-204ENST00000555890 KIAA1522Q9P206 1035 aaPredicted RBP7.97□□□□□ -1.13
SLIRP-204ENST00000555890 TPCN1Q9ULQ1 816 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 IQSEC3Q9UPP2 1182 aaPredicted RBP7.97□□□□□ -1.13
SLIRP-204ENST00000555890 ATP6V1DQ9Y5K8 247 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 TAF6LQ9Y6J9 622 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 DNAH12Q6ZR08 3092 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 WDR19Q8NEZ3 1342 aa7.97□□□□□ -1.13
SLIRP-204ENST00000555890 HELZ2Q9BYK8 2649 aaKnown RBP7.97□□□□□ -1.13
SLIRP-204ENST00000555890 MAGEB6P1A0A0J9YX57 407 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 ZNF16P17020 682 aaPredicted RBP7.96□□□□□ -1.14
SLIRP-204ENST00000555890 HOXD10P28358 340 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 GJB2P29033 226 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 GPSM2P81274 684 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 NBPF9Q3BBW0 867 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 C9orf50Q5SZB4 431 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 NAA16Q6N069 864 aaPredicted RBP7.96□□□□□ -1.14
SLIRP-204ENST00000555890 GJD3Q8N144 294 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 FBXL16Q8N461 479 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 WDR66Q8TBY9 1149 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 BRF1Q92994 677 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 ZNF274Q96GC6 653 aaPredicted RBP7.96□□□□□ -1.14
SLIRP-204ENST00000555890 TCEANC2Q96MN5 208 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 ARHGAP39Q9C0H5 1083 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 PRDM12Q9H4Q4 367 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 C11orf49Q9H6J7 331 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 ARMT1Q9H993 441 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.96□□□□□ -1.14
SLIRP-204ENST00000555890 SRRDQ9UH36 339 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 FZD1Q9UP38 647 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 KIF3AQ9Y496 699 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 SLC4A4Q9Y6R1 1079 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 MAST2Q6P0Q8 1798 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 PSME4Q14997 1843 aa7.96□□□□□ -1.14
SLIRP-204ENST00000555890 ASPMQ8IZT6 3477 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 GOLGA8CPA6NN73 597 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 FOXP2O15409 715 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 DCXO43602 365 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 STX6O43752 255 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 PFKFB2O60825 505 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 NR1I2O75469 434 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 LARGE1O95461 756 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 LDHCP07864 332 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 CCNYL3P0C7X3 344 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 ZSCAN22P10073 491 aaPredicted RBP7.95□□□□□ -1.14
SLIRP-204ENST00000555890 TDO2P48775 406 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 HAND2P61296 217 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 GSTO1P78417 241 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 CHAF1AQ13111 956 aaPredicted RBP7.95□□□□□ -1.14
SLIRP-204ENST00000555890 PKP1Q13835 747 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 ADGRE1Q14246 886 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 MCTP1Q6DN14 999 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 THSD4Q6ZMP0 1018 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 SCUBE3Q8IX30 993 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 TMEFF1Q8IYR6 380 aa7.95□□□□□ -1.14
SLIRP-204ENST00000555890 LCORLQ8N3X6 602 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms