RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 SLC24A3Q9HC58 644 aa19.15■□□□□ 0.66
SYNE3-204ENST00000555759 ZNF518AQ6AHZ1 1483 aa19.15■□□□□ 0.66
SYNE3-204ENST00000555759 CFAP73A6NFT4 308 aa19.15■□□□□ 0.66
SYNE3-204ENST00000555759 OR52Z1P0C646 297 aa19.14■□□□□ 0.66
SYNE3-204ENST00000555759 MAN2A1Q16706 1144 aa19.14■□□□□ 0.66
SYNE3-204ENST00000555759 DZIP3Q86Y13 1208 aaKnown RBP19.14■□□□□ 0.66
SYNE3-204ENST00000555759 TEX11Q8IYF3 940 aa19.14■□□□□ 0.66
SYNE3-204ENST00000555759 HAUS1Q96CS2 278 aa19.14■□□□□ 0.66
SYNE3-204ENST00000555759 BATF3Q9NR55 127 aa19.14■□□□□ 0.66
SYNE3-204ENST00000555759 MAGI2Q86UL8 1455 aa19.14■□□□□ 0.66
SYNE3-204ENST00000555759 MGEA5O60502 916 aa19.14■□□□□ 0.65
SYNE3-204ENST00000555759 RUBCNQ92622 972 aa19.14■□□□□ 0.65
SYNE3-204ENST00000555759 EDC3Q96F86 508 aaKnown RBP19.14■□□□□ 0.65
SYNE3-204ENST00000555759 ZCCHC17Q9NP64 241 aaKnown RBP19.14■□□□□ 0.65
SYNE3-204ENST00000555759 SAMSN1Q9NSI8 373 aaKnown RBP19.14■□□□□ 0.65
SYNE3-204ENST00000555759 NIP7Q9Y221 180 aaKnown RBP eCLIP19.14■□□□□ 0.65
SYNE3-204ENST00000555759 MRFAP1Q9Y605 127 aa19.14■□□□□ 0.65
SYNE3-204ENST00000555759 BRD2P25440 801 aaKnown RBP19.14■□□□□ 0.65
SYNE3-204ENST00000555759 NAA30Q147X3 362 aaPredicted RBP19.14■□□□□ 0.65
SYNE3-204ENST00000555759 P2RX5Q93086 422 aa19.14■□□□□ 0.65
SYNE3-204ENST00000555759 FAM212AQ96EL1 285 aa19.14■□□□□ 0.65
SYNE3-204ENST00000555759 CXorf56Q9H5V9 222 aa19.14■□□□□ 0.65
SYNE3-204ENST00000555759 LOC102724159A0A0B4J2E5 919 aa19.14■□□□□ 0.65
SYNE3-204ENST00000555759 CCDC188H7C350 402 aa19.14■□□□□ 0.65
SYNE3-204ENST00000555759 RASGRF2O14827 1237 aa19.14■□□□□ 0.65
SYNE3-204ENST00000555759 PTGDRQ13258 359 aa19.14■□□□□ 0.65
SYNE3-204ENST00000555759 RASA3Q14644 834 aa19.14■□□□□ 0.65
SYNE3-204ENST00000555759 PWP2Q15269 919 aaKnown RBP19.14■□□□□ 0.65
SYNE3-204ENST00000555759 DPH6Q7L8W6 267 aa19.14■□□□□ 0.65
SYNE3-204ENST00000555759 NYXQ9GZU5 481 aa19.14■□□□□ 0.65
SYNE3-204ENST00000555759 EIF4A1P60842 406 aaKnown RBP19.14■□□□□ 0.65
SYNE3-204ENST00000555759 TMTC3Q6ZXV5 915 aa19.14■□□□□ 0.65
SYNE3-204ENST00000555759 DRC3Q9H069 523 aa19.14■□□□□ 0.65
SYNE3-204ENST00000555759 MAPK13O15264 365 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 ATP1A3P13637 1013 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 CCDC144BQ3MJ40 725 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 TTLL7Q6ZT98 887 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 ARHGAP18Q8N392 663 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 IWS1Q96ST2 819 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 VIPAS39Q9H9C1 493 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 KLC4Q9NSK0 619 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 TADA3O75528 432 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 PPARAQ07869 468 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 FMO2Q99518 471 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 GOLGA8QA0A0J9YX86 632 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 GOLGA8OA6NCC3 632 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 GMNCA6NCL1 334 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 GOLGA8NF8WBI6 632 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 DKC1O60832 514 aaKnown RBP eCLIP19.13■□□□□ 0.65
SYNE3-204ENST00000555759 PDE6CP51160 858 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 SPATA5Q8NB90 893 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 ABTB1Q969K4 478 aaPredicted RBP19.13■□□□□ 0.65
SYNE3-204ENST00000555759 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.13■□□□□ 0.65
SYNE3-204ENST00000555759 GIPC1O14908 333 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 PRDM1O75626 825 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 DCTN3O75935 186 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 MOCS3O95396 460 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 PLTPP55058 493 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 ZNF354CQ86Y25 554 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 FGFR1OP2Q9NVK5 253 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 PCDHB13Q9Y5F0 798 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 PCDHA13Q9Y5I0 950 aa19.13■□□□□ 0.65
SYNE3-204ENST00000555759 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.12■□□□□ 0.65
SYNE3-204ENST00000555759 NME8Q8N427 588 aa19.12■□□□□ 0.65
SYNE3-204ENST00000555759 YY1AP1Q9H869 796 aa19.12■□□□□ 0.65
SYNE3-204ENST00000555759 PLAAQ9Y263 795 aa19.12■□□□□ 0.65
SYNE3-204ENST00000555759 CAPRIN2Q6IMN6 1127 aaKnown RBP19.12■□□□□ 0.65
SYNE3-204ENST00000555759 LRRC59Q96AG4 307 aaKnown RBP19.12■□□□□ 0.65
SYNE3-204ENST00000555759 TARSL2A2RTX5 802 aaKnown RBP19.12■□□□□ 0.65
SYNE3-204ENST00000555759 DDAH1O94760 285 aa19.12■□□□□ 0.65
SYNE3-204ENST00000555759 FGAP02671 866 aa19.12■□□□□ 0.65
SYNE3-204ENST00000555759 CYP21A2P08686 494 aa19.12■□□□□ 0.65
SYNE3-204ENST00000555759 TOGARAM2Q6ZUX3 1019 aa19.12■□□□□ 0.65
SYNE3-204ENST00000555759 STOML1Q9UBI4 398 aa19.12■□□□□ 0.65
SYNE3-204ENST00000555759 SCG2P13521 617 aa19.12■□□□□ 0.65
SYNE3-204ENST00000555759 ZMAT2Q96NC0 199 aaKnown RBP19.12■□□□□ 0.65
SYNE3-204ENST00000555759 ZMYND12Q9H0C1 365 aa19.12■□□□□ 0.65
SYNE3-204ENST00000555759 ABCC12Q96J65 1359 aa19.12■□□□□ 0.65
SYNE3-204ENST00000555759 SPECC1L-ADORA2AF8WAN1 911 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 FMNL1O95466 1100 aaPredicted RBP19.11■□□□□ 0.65
SYNE3-204ENST00000555759 IFNB1P01574 187 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 EXOC3L4Q17RC7 722 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 PRR16Q569H4 304 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 FAM26FQ5R3K3 315 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 AK8Q96MA6 479 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 ZSCAN10Q96SZ4 725 aaPredicted RBP19.11■□□□□ 0.65
SYNE3-204ENST00000555759 PANK4Q9NVE7 773 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 NFU1Q9UMS0 254 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 KIF21AQ7Z4S6 1674 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 NEURL1BA8MQ27 555 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 GPBP1Q86WP2 473 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 YIPF3Q9GZM5 350 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 SUFUQ9UMX1 484 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 PDE8AO60658 829 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 LARGE1O95461 756 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 ADAM9Q13443 819 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 GPCPD1Q9NPB8 672 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 MROH5Q6ZUA9 1318 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 A0A087WWV3 80 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 MRPS9P82933 396 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms