RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 ACAD9Q9H845 621 aa12.31□□□□□ -0.44
TMEM260-206ENST00000555046 MAD2L2Q9UI95 211 aa12.31□□□□□ -0.44
TMEM260-206ENST00000555046 CCPG1Q9ULG6 757 aa12.31□□□□□ -0.44
TMEM260-206ENST00000555046 DIS3Q9Y2L1 958 aaKnown RBP12.31□□□□□ -0.44
TMEM260-206ENST00000555046 PTCH2Q9Y6C5 1203 aa12.31□□□□□ -0.44
TMEM260-206ENST00000555046 PHIPQ8WWQ0 1821 aa12.3□□□□□ -0.44
TMEM260-206ENST00000555046 ZBTB43O43298 467 aa12.3□□□□□ -0.44
TMEM260-206ENST00000555046 ADCY3O60266 1144 aa12.3□□□□□ -0.44
TMEM260-206ENST00000555046 HOXC6P09630 235 aa12.3□□□□□ -0.44
TMEM260-206ENST00000555046 GRB14Q14449 540 aa12.3□□□□□ -0.44
TMEM260-206ENST00000555046 MFSD14CQ5VZR4 134 aa12.3□□□□□ -0.44
TMEM260-206ENST00000555046 CCDC174Q6PII3 467 aa12.3□□□□□ -0.44
TMEM260-206ENST00000555046 Q6ZUG5 572 aa12.3□□□□□ -0.44
TMEM260-206ENST00000555046 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.3□□□□□ -0.44
TMEM260-206ENST00000555046 MCF2L2Q86YR7 1114 aa12.3□□□□□ -0.44
TMEM260-206ENST00000555046 SAMD3Q8N6K7 520 aa12.3□□□□□ -0.44
TMEM260-206ENST00000555046 TRERF1Q96PN7 1200 aa12.3□□□□□ -0.44
TMEM260-206ENST00000555046 VAT1LQ9HCJ6 419 aa12.3□□□□□ -0.44
TMEM260-206ENST00000555046 PDRG1Q9NUG6 133 aa12.3□□□□□ -0.44
TMEM260-206ENST00000555046 NR2E3Q9Y5X4 410 aa12.3□□□□□ -0.44
TMEM260-206ENST00000555046 B4DLN1 442 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 ZBTB5O15062 677 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 PEX10O60683 326 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 ALAS1P13196 640 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 CYP2B6P20813 491 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 ADORA2AP29274 412 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 MRPL12P52815 198 aaKnown RBP12.29□□□□□ -0.44
TMEM260-206ENST00000555046 C8orf34Q49A92 452 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 FBXO11Q86XK2 927 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 RGS22Q8NE09 1264 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 USP6NLQ92738 828 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 RRP36Q96EU6 259 aaKnown RBP12.29□□□□□ -0.44
TMEM260-206ENST00000555046 AGBL1Q96MI9 1066 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 APBA2Q99767 749 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 HTATIP2Q9BUP3 242 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 AMNQ9BXJ7 453 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 LRRC2Q9BYS8 371 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 ALDH8A1Q9H2A2 487 aaPredicted RBP12.29□□□□□ -0.44
TMEM260-206ENST00000555046 RIOX1Q9H6W3 641 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 SEC63Q9UGP8 760 aaKnown RBP12.29□□□□□ -0.44
TMEM260-206ENST00000555046 NAP1L2Q9ULW6 460 aaPredicted RBP12.29□□□□□ -0.44
TMEM260-206ENST00000555046 GABRQQ9UN88 632 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 MRPL11Q9Y3B7 192 aaKnown RBP12.29□□□□□ -0.44
TMEM260-206ENST00000555046 ATAD5Q96QE3 1844 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 PFASO15067 1338 aa12.29□□□□□ -0.44
TMEM260-206ENST00000555046 PNMA6FA0A0J9YX94 578 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 KLF18A0A0U1RQI7 1052 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 HMGCRP04035 888 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 CDC37Q16543 378 aaPredicted RBP12.28□□□□□ -0.44
TMEM260-206ENST00000555046 RTN1Q16799 776 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 OLFML2BQ68BL8 750 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 APOA5Q6Q788 366 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 STAG2Q8N3U4 1231 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 MSL3Q8N5Y2 521 aaKnown RBP12.28□□□□□ -0.44
TMEM260-206ENST00000555046 BRF1Q92994 677 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 IL17RAQ96F46 866 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 GUCD1Q96NT3 240 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 MPHOSPH6Q99547 160 aaKnown RBP12.28□□□□□ -0.44
TMEM260-206ENST00000555046 SPZ1Q9BXG8 430 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 AGXT2Q9BYV1 514 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 JMJD4Q9H9V9 463 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 SENP2Q9HC62 589 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 RNF146Q9NTX7 359 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 MAP3K20Q9NYL2 800 aaKnown RBP12.28□□□□□ -0.44
TMEM260-206ENST00000555046 RIPK3Q9Y572 518 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 ZNF536O15090 1300 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 ABCB11O95342 1321 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 SYNGAP1Q96PV0 1343 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 MUC6Q6W4X9 2439 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 LOC285556D6RIA3 1793 aa12.28□□□□□ -0.44
TMEM260-206ENST00000555046 TMEM265A0A087WTH1 108 aa12.27□□□□□ -0.45
TMEM260-206ENST00000555046 METAP2P50579 478 aaKnown RBP eCLIP12.27□□□□□ -0.45
TMEM260-206ENST00000555046 EVCP57679 992 aa12.27□□□□□ -0.45
TMEM260-206ENST00000555046 CPLX2Q6PUV4 134 aaKnown RBP12.27□□□□□ -0.45
TMEM260-206ENST00000555046 MTMR8Q96EF0 704 aa12.27□□□□□ -0.45
TMEM260-206ENST00000555046 ZNF274Q96GC6 653 aaPredicted RBP12.27□□□□□ -0.45
TMEM260-206ENST00000555046 TCEANC2Q96MN5 208 aa12.27□□□□□ -0.45
TMEM260-206ENST00000555046 C22orf23Q9BZE7 217 aa12.27□□□□□ -0.45
TMEM260-206ENST00000555046 GPHNQ9NQX3 736 aaPredicted RBP12.27□□□□□ -0.45
TMEM260-206ENST00000555046 HOMER2Q9NSB8 354 aa12.27□□□□□ -0.45
TMEM260-206ENST00000555046 PCDHA1Q9Y5I3 950 aa12.27□□□□□ -0.45
TMEM260-206ENST00000555046 GREB1LQ9C091 1923 aaPredicted RBP12.27□□□□□ -0.45
TMEM260-206ENST00000555046 LOC102724159A0A0B4J2E5 919 aa12.26□□□□□ -0.45
TMEM260-206ENST00000555046 GOLGA8AA7E2F4 631 aa12.26□□□□□ -0.45
TMEM260-206ENST00000555046 GOLGA8BA8MQT2 603 aa12.26□□□□□ -0.45
TMEM260-206ENST00000555046 POTEB2H3BUK9 544 aa12.26□□□□□ -0.45
TMEM260-206ENST00000555046 SEC24BO95487 1268 aa12.26□□□□□ -0.45
TMEM260-206ENST00000555046 SNAP25P60880 206 aa12.26□□□□□ -0.45
TMEM260-206ENST00000555046 AKAP17AQ02040 695 aaKnown RBP12.26□□□□□ -0.45
TMEM260-206ENST00000555046 PWP2Q15269 919 aaKnown RBP12.26□□□□□ -0.45
TMEM260-206ENST00000555046 QRICH1Q2TAL8 776 aa12.26□□□□□ -0.45
TMEM260-206ENST00000555046 LRIT3Q3SXY7 679 aa12.26□□□□□ -0.45
TMEM260-206ENST00000555046 ZNF467Q7Z7K2 595 aaPredicted RBP12.26□□□□□ -0.45
TMEM260-206ENST00000555046 MICU3Q86XE3 530 aa12.26□□□□□ -0.45
TMEM260-206ENST00000555046 TEX2Q8IWB9 1127 aa12.26□□□□□ -0.45
TMEM260-206ENST00000555046 SH3TC2Q8TF17 1288 aa12.26□□□□□ -0.45
TMEM260-206ENST00000555046 ADD3Q9UEY8 706 aaKnown RBP12.26□□□□□ -0.45
TMEM260-206ENST00000555046 NRBP1Q9UHY1 535 aa12.26□□□□□ -0.45
TMEM260-206ENST00000555046 BRPF3Q9ULD4 1205 aa12.26□□□□□ -0.45
TMEM260-206ENST00000555046 MYH8P13535 1937 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms