RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 DHX16O60231 1041 aaKnown RBP14.4□□□□□ -0.1
SYNE2-214ENST00000554928 DDAH1O94760 285 aa14.4□□□□□ -0.1
SYNE2-214ENST00000554928 ANKRD35Q8N283 1001 aa14.4□□□□□ -0.1
SYNE2-214ENST00000554928 PIBF1Q8WXW3 757 aa14.4□□□□□ -0.1
SYNE2-214ENST00000554928 TBC1D5Q92609 795 aa14.4□□□□□ -0.1
SYNE2-214ENST00000554928 MTMR8Q96EF0 704 aa14.4□□□□□ -0.1
SYNE2-214ENST00000554928 DEFB118Q96PH6 123 aa14.4□□□□□ -0.1
SYNE2-214ENST00000554928 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.4□□□□□ -0.1
SYNE2-214ENST00000554928 PAK6Q9NQU5 681 aaPredicted RBP14.4□□□□□ -0.1
SYNE2-214ENST00000554928 WDR19Q8NEZ3 1342 aa14.4□□□□□ -0.1
SYNE2-214ENST00000554928 SOWAHBA6NEL2 793 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 CCDC69A6NI79 296 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 CASTP20810 708 aaKnown RBP14.39□□□□□ -0.11
SYNE2-214ENST00000554928 RPS6KB1P23443 525 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 TKFCQ3LXA3 575 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 OLFML2BQ68BL8 750 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 NSMFQ6X4W1 530 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 SLC30A10Q6XR72 485 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 Q6ZUG5 572 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 SGMS1Q86VZ5 419 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 MICU3Q86XE3 530 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 HOMER1Q86YM7 354 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 FAM133AQ8N9E0 248 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 DDX11Q96FC9 970 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 PIGSQ96S52 555 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 TMEM106CQ9BVX2 250 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 RIOX1Q9H6W3 641 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 CYP39A1Q9NYL5 469 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 FBXO40Q9UH90 709 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 GTF3C3Q9Y5Q9 886 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 KIAA0100Q14667 2235 aaKnown RBP14.39□□□□□ -0.11
SYNE2-214ENST00000554928 RPTORQ8N122 1335 aa14.39□□□□□ -0.11
SYNE2-214ENST00000554928 MKI67P46013 3256 aaKnown RBP14.39□□□□□ -0.11
SYNE2-214ENST00000554928 EPB41L2O43491 1005 aaKnown RBP14.38□□□□□ -0.11
SYNE2-214ENST00000554928 GJB1P08034 283 aa14.38□□□□□ -0.11
SYNE2-214ENST00000554928 CYBAP13498 195 aa14.38□□□□□ -0.11
SYNE2-214ENST00000554928 RGS19P49795 217 aa14.38□□□□□ -0.11
SYNE2-214ENST00000554928 APOBRQ0VD83 1088 aa14.38□□□□□ -0.11
SYNE2-214ENST00000554928 BAATQ14032 418 aaPredicted RBP14.38□□□□□ -0.11
SYNE2-214ENST00000554928 MFSD14CQ5VZR4 134 aa14.38□□□□□ -0.11
SYNE2-214ENST00000554928 APOA5Q6Q788 366 aa14.38□□□□□ -0.11
SYNE2-214ENST00000554928 BLOC1S2Q6QNY1 142 aa14.38□□□□□ -0.11
SYNE2-214ENST00000554928 TRMT44Q8IYL2 757 aaKnown RBP14.38□□□□□ -0.11
SYNE2-214ENST00000554928 SRBD1Q8N5C6 995 aaKnown RBP14.38□□□□□ -0.11
SYNE2-214ENST00000554928 U2AF1L4Q8WU68 220 aaKnown RBP14.38□□□□□ -0.11
SYNE2-214ENST00000554928 LARP6Q9BRS8 491 aaKnown RBP14.38□□□□□ -0.11
SYNE2-214ENST00000554928 UPF3BQ9BZI7 483 aaKnown RBP14.38□□□□□ -0.11
SYNE2-214ENST00000554928 SLC12A7Q9Y666 1083 aa14.38□□□□□ -0.11
SYNE2-214ENST00000554928 KLF18A0A0U1RQI7 1052 aa14.37□□□□□ -0.11
SYNE2-214ENST00000554928 hCG_1642624A0A1W2PR95 340 aa14.37□□□□□ -0.11
SYNE2-214ENST00000554928 OPLAHO14841 1288 aa14.37□□□□□ -0.11
SYNE2-214ENST00000554928 SNAI1O95863 264 aaPredicted RBP14.37□□□□□ -0.11
SYNE2-214ENST00000554928 GJA8P48165 433 aa14.37□□□□□ -0.11
SYNE2-214ENST00000554928 ANO1Q5XXA6 986 aa14.37□□□□□ -0.11
SYNE2-214ENST00000554928 BRF1Q92994 677 aa14.37□□□□□ -0.11
SYNE2-214ENST00000554928 TINF2Q9BSI4 451 aa14.37□□□□□ -0.11
SYNE2-214ENST00000554928 ZSWIM6Q9HCJ5 1215 aa14.37□□□□□ -0.11
SYNE2-214ENST00000554928 HMX1Q9NP08 348 aaPredicted RBP14.37□□□□□ -0.11
SYNE2-214ENST00000554928 FAM217BQ9NTX9 383 aaPredicted RBP14.37□□□□□ -0.11
SYNE2-214ENST00000554928 DIS3Q9Y2L1 958 aaKnown RBP14.37□□□□□ -0.11
SYNE2-214ENST00000554928 ZNFX1Q9P2E3 1918 aaKnown RBP14.37□□□□□ -0.11
SYNE2-214ENST00000554928 POTEB2H3BUK9 544 aa14.36□□□□□ -0.11
SYNE2-214ENST00000554928 ZBTB5O15062 677 aa14.36□□□□□ -0.11
SYNE2-214ENST00000554928 SGPL1O95470 568 aa14.36□□□□□ -0.11
SYNE2-214ENST00000554928 HMGB1P09429 215 aaKnown RBP14.36□□□□□ -0.11
SYNE2-214ENST00000554928 CDC27P30260 824 aa14.36□□□□□ -0.11
SYNE2-214ENST00000554928 TOB2Q14106 344 aaPredicted RBP14.36□□□□□ -0.11
SYNE2-214ENST00000554928 LHX8Q68G74 356 aa14.36□□□□□ -0.11
SYNE2-214ENST00000554928 FBXO11Q86XK2 927 aa14.36□□□□□ -0.11
SYNE2-214ENST00000554928 TMTC2Q8N394 836 aa14.36□□□□□ -0.11
SYNE2-214ENST00000554928 CCDC82Q8N4S0 544 aa14.36□□□□□ -0.11
SYNE2-214ENST00000554928 FANCBQ8NB91 859 aa14.36□□□□□ -0.11
SYNE2-214ENST00000554928 CTCFLQ8NI51 663 aaPredicted RBP14.36□□□□□ -0.11
SYNE2-214ENST00000554928 LENG1Q96BZ8 264 aaPredicted RBP14.36□□□□□ -0.11
SYNE2-214ENST00000554928 MAP3K14Q99558 947 aa14.36□□□□□ -0.11
SYNE2-214ENST00000554928 CRISPLD2Q9H0B8 497 aa14.36□□□□□ -0.11
SYNE2-214ENST00000554928 COL20A1Q9P218 1284 aa14.36□□□□□ -0.11
SYNE2-214ENST00000554928 LCTP09848 1927 aa14.36□□□□□ -0.11
SYNE2-214ENST00000554928 RBBP6Q7Z6E9 1792 aaKnown RBP14.35□□□□□ -0.11
SYNE2-214ENST00000554928 BAZ2BQ9UIF8 2168 aaKnown RBP14.35□□□□□ -0.11
SYNE2-214ENST00000554928 PTPDC1A2A3K4 754 aa14.35□□□□□ -0.11
SYNE2-214ENST00000554928 ZNF865P0CJ78 1059 aaPredicted RBP14.35□□□□□ -0.11
SYNE2-214ENST00000554928 PTGS1P23219 599 aa14.35□□□□□ -0.11
SYNE2-214ENST00000554928 CALML3P27482 149 aa14.35□□□□□ -0.11
SYNE2-214ENST00000554928 CNGA1P29973 690 aa14.35□□□□□ -0.11
SYNE2-214ENST00000554928 MNX1P50219 401 aaPredicted RBP14.35□□□□□ -0.11
SYNE2-214ENST00000554928 RPS6P62753 249 aaKnown RBP14.35□□□□□ -0.11
SYNE2-214ENST00000554928 FUT2Q10981 343 aa14.35□□□□□ -0.11
SYNE2-214ENST00000554928 TMTC3Q6ZXV5 915 aa14.35□□□□□ -0.11
SYNE2-214ENST00000554928 RUFY3Q7L099 469 aa14.35□□□□□ -0.11
SYNE2-214ENST00000554928 DIS3LQ8TF46 1054 aaKnown RBP14.35□□□□□ -0.11
SYNE2-214ENST00000554928 AGXT2Q9BYV1 514 aa14.35□□□□□ -0.11
SYNE2-214ENST00000554928 SLC5A4Q9NY91 659 aa14.35□□□□□ -0.11
SYNE2-214ENST00000554928 ABCB11O95342 1321 aa14.35□□□□□ -0.11
SYNE2-214ENST00000554928 GOLGA8AA7E2F4 631 aa14.34□□□□□ -0.11
SYNE2-214ENST00000554928 GOLGA8BA8MQT2 603 aa14.34□□□□□ -0.11
SYNE2-214ENST00000554928 ZBTB43O43298 467 aa14.34□□□□□ -0.11
SYNE2-214ENST00000554928 ADCY6O43306 1168 aa14.34□□□□□ -0.11
SYNE2-214ENST00000554928 PSMA5P28066 241 aa14.34□□□□□ -0.11
SYNE2-214ENST00000554928 MAMDC4Q6UXC1 1216 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms