RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 HEATR3Q7Z4Q2 680 aa18.96■□□□□ 0.63
SPTLC2-203ENST00000554901 RGS22Q8NE09 1264 aa18.96■□□□□ 0.63
SPTLC2-203ENST00000554901 ACAD9Q9H845 621 aa18.96■□□□□ 0.63
SPTLC2-203ENST00000554901 hCG_1642624A0A1W2PR95 340 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 STRNO43815 780 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 JAK2O60674 1132 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 FDPSP14324 419 aaKnown RBP18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 ERCC3P19447 782 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 USH1GQ495M9 461 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 WWC2Q6AWC2 1192 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 NCAPG2Q86XI2 1143 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 MCF2L2Q86YR7 1114 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 TRERF1Q96PN7 1200 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 GLT8D2Q9H1C3 349 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 RNF146Q9NTX7 359 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 MAP3K20Q9NYL2 800 aaKnown RBP18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 SMC3Q9UQE7 1217 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 RIPK3Q9Y572 518 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 PEX10O60683 326 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 LACTBP83111 547 aaPredicted RBP18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 KIF22Q14807 665 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 ABRAQ8N0Z2 381 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 FAM184AQ8NB25 1140 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 CCDC148Q8NFR7 591 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 PORCNQ9H237 461 aa18.95■□□□□ 0.62
SPTLC2-203ENST00000554901 MYH6P13533 1939 aa18.94■□□□□ 0.62
SPTLC2-203ENST00000554901 ESYT2A0FGR8 921 aa18.94■□□□□ 0.62
SPTLC2-203ENST00000554901 STXBP3O00186 592 aa18.94■□□□□ 0.62
SPTLC2-203ENST00000554901 FKTNO75072 461 aa18.94■□□□□ 0.62
SPTLC2-203ENST00000554901 PPFIA3O75145 1194 aa18.94■□□□□ 0.62
SPTLC2-203ENST00000554901 NAPAP54920 295 aa18.94■□□□□ 0.62
SPTLC2-203ENST00000554901 GHRHRQ02643 423 aa18.94■□□□□ 0.62
SPTLC2-203ENST00000554901 ARHGEF6Q15052 776 aa18.94■□□□□ 0.62
SPTLC2-203ENST00000554901 CLEC4DQ8WXI8 215 aa18.94■□□□□ 0.62
SPTLC2-203ENST00000554901 GPKOWQ92917 476 aaPredicted RBP eCLIP18.94■□□□□ 0.62
SPTLC2-203ENST00000554901 COA7Q96BR5 231 aa18.94■□□□□ 0.62
SPTLC2-203ENST00000554901 DDX11Q96FC9 970 aa18.94■□□□□ 0.62
SPTLC2-203ENST00000554901 HSP90AA1P07900 732 aaKnown RBP18.93■□□□□ 0.62
SPTLC2-203ENST00000554901 FCGRTP55899 365 aa18.93■□□□□ 0.62
SPTLC2-203ENST00000554901 GALNT17Q6IS24 598 aa18.93■□□□□ 0.62
SPTLC2-203ENST00000554901 ERO1AQ96HE7 468 aa18.93■□□□□ 0.62
SPTLC2-203ENST00000554901 ALG1Q9BT22 464 aa18.93■□□□□ 0.62
SPTLC2-203ENST00000554901 EFCC1Q9HA90 598 aa18.93■□□□□ 0.62
SPTLC2-203ENST00000554901 IVNS1ABPQ9Y6Y0 642 aa18.93■□□□□ 0.62
SPTLC2-203ENST00000554901 PCNTO95613 3336 aa18.92■□□□□ 0.62
SPTLC2-203ENST00000554901 PFASO15067 1338 aa18.92■□□□□ 0.62
SPTLC2-203ENST00000554901 GNRH1P01148 92 aa18.92■□□□□ 0.62
SPTLC2-203ENST00000554901 FCER1AP12319 257 aa18.92■□□□□ 0.62
SPTLC2-203ENST00000554901 GJB2P29033 226 aa18.92■□□□□ 0.62
SPTLC2-203ENST00000554901 SLC4A3P48751 1232 aa18.92■□□□□ 0.62
SPTLC2-203ENST00000554901 PLEKHH3Q7Z736 793 aa18.92■□□□□ 0.62
SPTLC2-203ENST00000554901 ZMYND12Q9H0C1 365 aa18.92■□□□□ 0.62
SPTLC2-203ENST00000554901 CWC22Q9HCG8 908 aaKnown RBP18.92■□□□□ 0.62
SPTLC2-203ENST00000554901 HOMER2Q9NSB8 354 aa18.92■□□□□ 0.62
SPTLC2-203ENST00000554901 RBM19Q9Y4C8 960 aaKnown RBP18.92■□□□□ 0.62
SPTLC2-203ENST00000554901 CALML3P27482 149 aa18.91■□□□□ 0.62
SPTLC2-203ENST00000554901 GNA11P29992 359 aa18.91■□□□□ 0.62
SPTLC2-203ENST00000554901 MRPL12P52815 198 aaKnown RBP18.91■□□□□ 0.62
SPTLC2-203ENST00000554901 KCTD2Q14681 263 aa18.91■□□□□ 0.62
SPTLC2-203ENST00000554901 MUM1L1Q5H9M0 696 aa18.91■□□□□ 0.62
SPTLC2-203ENST00000554901 GPR142Q7Z601 462 aa18.91■□□□□ 0.62
SPTLC2-203ENST00000554901 ZNF296Q8WUU4 475 aaPredicted RBP18.91■□□□□ 0.62
SPTLC2-203ENST00000554901 PSTPIP2Q9H939 334 aa18.91■□□□□ 0.62
SPTLC2-203ENST00000554901 C6orf50Q9HD87 102 aa18.91■□□□□ 0.62
SPTLC2-203ENST00000554901 SLC15A5A6NIM6 579 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 PIK3CDO00329 1044 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 NFIBO00712 420 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 TNPO2O14787 897 aaKnown RBP18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 OPLAHO14841 1288 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 PDIA4P13667 645 aaKnown RBP18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 PDCP20941 246 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 PTPREP23469 700 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 PSMC4P43686 418 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 TRIM29Q14134 588 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 WDR78Q5VTH9 848 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 MCTP2Q6DN12 878 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 TYW1BQ6NUM6 668 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 BICD2Q8TD16 824 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 SOCS4Q8WXH5 440 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 CUL5Q93034 780 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 MMP19Q99542 508 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 RIC8AQ9NPQ8 531 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 A1CFQ9NQ94 594 aaKnown RBP18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 VPS54Q9P1Q0 977 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 SMCO2A6NFE2 343 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 HSD17B4P51659 736 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 GRB14Q14449 540 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 ANKRD35Q8N283 1001 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 AIFM3Q96NN9 605 aa18.9■□□□□ 0.62
SPTLC2-203ENST00000554901 GCOM1H8Y6P7 765 aaPredicted RBP18.89■□□□□ 0.61
SPTLC2-203ENST00000554901 POLR2MP0CAP2 368 aa18.89■□□□□ 0.61
SPTLC2-203ENST00000554901 HSPA1AP0DMV8 641 aaKnown RBP18.89■□□□□ 0.61
SPTLC2-203ENST00000554901 HSPA1BP0DMV9 641 aaKnown RBP18.89■□□□□ 0.61
SPTLC2-203ENST00000554901 TAL1P17542 331 aaPredicted RBP18.89■□□□□ 0.61
SPTLC2-203ENST00000554901 HOXD10P28358 340 aa18.89■□□□□ 0.61
SPTLC2-203ENST00000554901 CTCFP49711 727 aaPredicted RBP18.89■□□□□ 0.61
SPTLC2-203ENST00000554901 ADCY7P51828 1080 aa18.89■□□□□ 0.61
SPTLC2-203ENST00000554901 NLRP5P59047 1200 aa18.89■□□□□ 0.61
SPTLC2-203ENST00000554901 NSMFQ6X4W1 530 aa18.89■□□□□ 0.61
SPTLC2-203ENST00000554901 RNF207Q6ZRF8 634 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms