RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 NKX2-4Q9H2Z4 354 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 CYP26B1Q9NR63 512 aa7.69□□□□□ -1.18
SCFD1-211ENST00000554437 HPXP02790 462 aa7.68□□□□□ -1.18
SCFD1-211ENST00000554437 SNRPB2P08579 225 aaKnown RBP7.68□□□□□ -1.18
SCFD1-211ENST00000554437 TRHRP34981 398 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-211ENST00000554437 KCNJ6P48051 423 aa7.68□□□□□ -1.18
SCFD1-211ENST00000554437 HSP90AA2PQ14568 343 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-211ENST00000554437 TMEM52Q8NDY8 209 aa7.68□□□□□ -1.18
SCFD1-211ENST00000554437 MRFAP1L1Q96HT8 127 aa7.68□□□□□ -1.18
SCFD1-211ENST00000554437 PTCHD1Q96NR3 888 aa7.68□□□□□ -1.18
SCFD1-211ENST00000554437 SPATA9Q9BWV2 254 aa7.68□□□□□ -1.18
SCFD1-211ENST00000554437 C19orf44Q9H6X5 657 aa7.68□□□□□ -1.18
SCFD1-211ENST00000554437 FADS2P1A8MWK0 482 aa7.67□□□□□ -1.18
SCFD1-211ENST00000554437 TBC1D8O95759 1140 aa7.67□□□□□ -1.18
SCFD1-211ENST00000554437 HOXC12P31275 282 aa7.67□□□□□ -1.18
SCFD1-211ENST00000554437 ECI1P42126 302 aa7.67□□□□□ -1.18
SCFD1-211ENST00000554437 GRIA2P42262 883 aa7.67□□□□□ -1.18
SCFD1-211ENST00000554437 RTP1P59025 263 aa7.67□□□□□ -1.18
SCFD1-211ENST00000554437 HLA-DQA1Q5Y7H0 255 aa7.67□□□□□ -1.18
SCFD1-211ENST00000554437 CYP2R1Q6VVX0 501 aa7.67□□□□□ -1.18
SCFD1-211ENST00000554437 ABHD4Q8TB40 342 aa7.67□□□□□ -1.18
SCFD1-211ENST00000554437 KIRREL1Q96J84 757 aa7.67□□□□□ -1.18
SCFD1-211ENST00000554437 FMNL2Q96PY5 1086 aa7.67□□□□□ -1.18
SCFD1-211ENST00000554437 DNAJC7Q99615 494 aa7.67□□□□□ -1.18
SCFD1-211ENST00000554437 AARSD1Q9BTE6 412 aaKnown RBP7.67□□□□□ -1.18
SCFD1-211ENST00000554437 GPRC5CQ9NQ84 441 aa7.67□□□□□ -1.18
SCFD1-211ENST00000554437 DIAPH1O60610 1272 aaKnown RBP7.66□□□□□ -1.18
SCFD1-211ENST00000554437 SF1Q15637 639 aaKnown RBP7.66□□□□□ -1.18
SCFD1-211ENST00000554437 FYB2Q5VWT5 728 aa7.66□□□□□ -1.18
SCFD1-211ENST00000554437 JAMLQ86YT9 394 aa7.66□□□□□ -1.18
SCFD1-211ENST00000554437 LILRA2Q8N149 483 aa7.66□□□□□ -1.18
SCFD1-211ENST00000554437 COPS5Q92905 334 aa7.66□□□□□ -1.18
SCFD1-211ENST00000554437 CCDC140Q96MF4 163 aa7.66□□□□□ -1.18
SCFD1-211ENST00000554437 ARHGEF4Q9NR80 690 aa7.66□□□□□ -1.18
SCFD1-211ENST00000554437 GPR160Q9UJ42 338 aa7.66□□□□□ -1.18
SCFD1-211ENST00000554437 KDM2BQ8NHM5 1336 aa7.66□□□□□ -1.18
SCFD1-211ENST00000554437 A0A1W2PQ45 241 aaPredicted RBP7.65□□□□□ -1.18
SCFD1-211ENST00000554437 A0A1W2PQY0 241 aa7.65□□□□□ -1.18
SCFD1-211ENST00000554437 PAPLNO95428 1278 aa7.65□□□□□ -1.18
SCFD1-211ENST00000554437 CPP00450 1065 aa7.65□□□□□ -1.18
SCFD1-211ENST00000554437 THBDP07204 575 aa7.65□□□□□ -1.18
SCFD1-211ENST00000554437 TAL1P17542 331 aaPredicted RBP7.65□□□□□ -1.18
SCFD1-211ENST00000554437 PAMP19021 973 aa7.65□□□□□ -1.18
SCFD1-211ENST00000554437 FZD5Q13467 585 aa7.65□□□□□ -1.18
SCFD1-211ENST00000554437 LAPTM5Q13571 262 aa7.65□□□□□ -1.18
SCFD1-211ENST00000554437 NR0B2Q15466 257 aa7.65□□□□□ -1.18
SCFD1-211ENST00000554437 TIGD5Q53EQ6 642 aa7.65□□□□□ -1.18
SCFD1-211ENST00000554437 IER2Q9BTL4 223 aa7.65□□□□□ -1.18
SCFD1-211ENST00000554437 SP110Q9HB58 689 aa7.65□□□□□ -1.18
SCFD1-211ENST00000554437 CLEC1BQ9P126 229 aa7.65□□□□□ -1.18
SCFD1-211ENST00000554437 TRAV20A0A0B4J274 112 aa7.64□□□□□ -1.19
SCFD1-211ENST00000554437 NPHP3-ACAD11A0A0J9YXS1 232 aa7.64□□□□□ -1.19
SCFD1-211ENST00000554437 WTIPA6NIX2 430 aaPredicted RBP7.64□□□□□ -1.19
SCFD1-211ENST00000554437 NRDCO43847 1150 aa7.64□□□□□ -1.19
SCFD1-211ENST00000554437 PSPNO60542 156 aa7.64□□□□□ -1.19
SCFD1-211ENST00000554437 PLS3P13797 630 aa7.64□□□□□ -1.19
SCFD1-211ENST00000554437 JUNBP17275 347 aaPredicted RBP7.64□□□□□ -1.19
SCFD1-211ENST00000554437 ITGB5P18084 799 aa7.64□□□□□ -1.19
SCFD1-211ENST00000554437 CEBPAP49715 358 aaPredicted RBP7.64□□□□□ -1.19
SCFD1-211ENST00000554437 GFRA1P56159 465 aa7.64□□□□□ -1.19
SCFD1-211ENST00000554437 KCNMB1Q16558 191 aa7.64□□□□□ -1.19
SCFD1-211ENST00000554437 HSF5Q4G112 596 aaPredicted RBP7.64□□□□□ -1.19
SCFD1-211ENST00000554437 TMEM67Q5HYA8 995 aa7.64□□□□□ -1.19
SCFD1-211ENST00000554437 GALNT18Q6P9A2 607 aa7.64□□□□□ -1.19
SCFD1-211ENST00000554437 SLCO6A1Q86UG4 719 aa7.64□□□□□ -1.19
SCFD1-211ENST00000554437 JMJD8Q96S16 334 aa7.64□□□□□ -1.19
SCFD1-211ENST00000554437 PIF1Q9H611 641 aa7.64□□□□□ -1.19
SCFD1-211ENST00000554437 TAF6LQ9Y6J9 622 aa7.64□□□□□ -1.19
SCFD1-211ENST00000554437 ARID1BQ8NFD5 2236 aaPredicted RBP7.64□□□□□ -1.19
SCFD1-211ENST00000554437 TRBV23OR9-2A0A075B6M9 112 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 A0A1W2PQ27 194 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 A0A1W2PQ64 194 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 A0A1W2PQC6 194 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 A0A1W2PQD8 194 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 NOTOA8MTQ0 251 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 PRODHO43272 600 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 CAPNS1P04632 268 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 SCG5P05408 212 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 CYP4F3Q08477 520 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 SNX17Q15036 470 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 PRSS53Q2L4Q9 553 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 ZSWIM9Q86XI8 627 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 CPNE8Q86YQ8 564 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 TMEM145Q8NBT3 493 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 FRS2Q8WU20 508 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 KCTD13Q8WZ19 329 aa7.63□□□□□ -1.19
SCFD1-211ENST00000554437 ADCY3O60266 1144 aa7.62□□□□□ -1.19
SCFD1-211ENST00000554437 FAM153BP0C7A2 387 aa7.62□□□□□ -1.19
SCFD1-211ENST00000554437 FGFR1P11362 822 aa7.62□□□□□ -1.19
SCFD1-211ENST00000554437 L1CAMP32004 1257 aa7.62□□□□□ -1.19
SCFD1-211ENST00000554437 YOD1Q5VVQ6 348 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-211ENST00000554437 NSMFQ6X4W1 530 aa7.62□□□□□ -1.19
SCFD1-211ENST00000554437 SIRT2Q8IXJ6 389 aa7.62□□□□□ -1.19
SCFD1-211ENST00000554437 ZBTB38Q8NAP3 1195 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-211ENST00000554437 NPLOC4Q8TAT6 608 aa7.62□□□□□ -1.19
SCFD1-211ENST00000554437 FAM168AQ92567 244 aa7.62□□□□□ -1.19
SCFD1-211ENST00000554437 IPO9Q96P70 1041 aaKnown RBP7.62□□□□□ -1.19
SCFD1-211ENST00000554437 CDC6Q99741 560 aa7.62□□□□□ -1.19
SCFD1-211ENST00000554437 PLCD4Q9BRC7 762 aa7.62□□□□□ -1.19
SCFD1-211ENST00000554437 RNF32Q9H0A6 362 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms