RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 SLC35F1Q5T1Q4 408 aa7.45□□□□□ -1.22
CHD8-207ENST00000554384 KCNT2Q6UVM3 1135 aa7.45□□□□□ -1.22
CHD8-207ENST00000554384 USP53Q70EK8 1073 aa7.45□□□□□ -1.22
CHD8-207ENST00000554384 SLC7A14Q8TBB6 771 aa7.45□□□□□ -1.22
CHD8-207ENST00000554384 KCTD13Q8WZ19 329 aa7.45□□□□□ -1.22
CHD8-207ENST00000554384 COPS5Q92905 334 aa7.45□□□□□ -1.22
CHD8-207ENST00000554384 FEZ1Q99689 392 aa7.45□□□□□ -1.22
CHD8-207ENST00000554384 TRAF6Q9Y4K3 522 aa7.45□□□□□ -1.22
CHD8-207ENST00000554384 TMEM82A0PJX8 343 aa7.44□□□□□ -1.22
CHD8-207ENST00000554384 ADAMTS4O75173 837 aa7.44□□□□□ -1.22
CHD8-207ENST00000554384 CLSTN1O94985 981 aa7.44□□□□□ -1.22
CHD8-207ENST00000554384 SCG5P05408 212 aa7.44□□□□□ -1.22
CHD8-207ENST00000554384 PLS3P13797 630 aa7.44□□□□□ -1.22
CHD8-207ENST00000554384 SDSP20132 328 aa7.44□□□□□ -1.22
CHD8-207ENST00000554384 RPL10P27635 214 aaKnown RBP7.44□□□□□ -1.22
CHD8-207ENST00000554384 PCBP3P57721 371 aaKnown RBP7.44□□□□□ -1.22
CHD8-207ENST00000554384 SUMO1P63165 101 aaKnown RBP7.44□□□□□ -1.22
CHD8-207ENST00000554384 TEKQ02763 1124 aa7.44□□□□□ -1.22
CHD8-207ENST00000554384 PABPC4Q13310 644 aaKnown RBP eCLIP7.44□□□□□ -1.22
CHD8-207ENST00000554384 CPSF6Q16630 551 aaKnown RBP eCLIP7.44□□□□□ -1.22
CHD8-207ENST00000554384 ZNF574Q6ZN55 896 aaPredicted RBP7.44□□□□□ -1.22
CHD8-207ENST00000554384 SPRED2Q7Z698 418 aa7.44□□□□□ -1.22
CHD8-207ENST00000554384 THAP5Q7Z6K1 395 aa7.44□□□□□ -1.22
CHD8-207ENST00000554384 CCDC103Q8IW40 242 aa7.44□□□□□ -1.22
CHD8-207ENST00000554384 NPLOC4Q8TAT6 608 aa7.44□□□□□ -1.22
CHD8-207ENST00000554384 HRASLS5Q96KN8 279 aa7.44□□□□□ -1.22
CHD8-207ENST00000554384 CDADC1Q9BWV3 514 aa7.44□□□□□ -1.22
CHD8-207ENST00000554384 NDOR1Q9UHB4 597 aa7.44□□□□□ -1.22
CHD8-207ENST00000554384 SNX11Q9Y5W9 270 aa7.44□□□□□ -1.22
CHD8-207ENST00000554384 BACE2Q9Y5Z0 518 aa7.44□□□□□ -1.22
CHD8-207ENST00000554384 OAS3Q9Y6K5 1087 aaKnown RBP7.44□□□□□ -1.22
CHD8-207ENST00000554384 KIAA1324LA8MWY0 1029 aaPredicted RBP7.43□□□□□ -1.22
CHD8-207ENST00000554384 LCP1P13796 627 aa7.43□□□□□ -1.22
CHD8-207ENST00000554384 NOP2P46087 812 aaKnown RBP7.43□□□□□ -1.22
CHD8-207ENST00000554384 MAP4K2Q12851 820 aa7.43□□□□□ -1.22
CHD8-207ENST00000554384 ZC3H12BQ5HYM0 836 aaKnown RBP7.43□□□□□ -1.22
CHD8-207ENST00000554384 MBLAC2Q68D91 279 aa7.43□□□□□ -1.22
CHD8-207ENST00000554384 FGD2Q7Z6J4 655 aa7.43□□□□□ -1.22
CHD8-207ENST00000554384 GPATCH3Q96I76 525 aa7.43□□□□□ -1.22
CHD8-207ENST00000554384 CCDC140Q96MF4 163 aa7.43□□□□□ -1.22
CHD8-207ENST00000554384 SLC52A2Q9HAB3 445 aa7.43□□□□□ -1.22
CHD8-207ENST00000554384 EBF1Q9UH73 591 aa7.43□□□□□ -1.22
CHD8-207ENST00000554384 COBLO75128 1261 aa7.42□□□□□ -1.22
CHD8-207ENST00000554384 SEPHS1P49903 392 aa7.42□□□□□ -1.22
CHD8-207ENST00000554384 PRKCQQ04759 706 aa7.42□□□□□ -1.22
CHD8-207ENST00000554384 IKZF1Q13422 519 aa7.42□□□□□ -1.22
CHD8-207ENST00000554384 WAPLQ7Z5K2 1190 aa7.42□□□□□ -1.22
CHD8-207ENST00000554384 FILIP1Q7Z7B0 1213 aa7.42□□□□□ -1.22
CHD8-207ENST00000554384 CPNE8Q86YQ8 564 aa7.42□□□□□ -1.22
CHD8-207ENST00000554384 WFDC3Q8IUB2 231 aa7.42□□□□□ -1.22
CHD8-207ENST00000554384 PPIL6Q8IXY8 311 aa7.42□□□□□ -1.22
CHD8-207ENST00000554384 TMEM52Q8NDY8 209 aa7.42□□□□□ -1.22
CHD8-207ENST00000554384 CARS2Q9HA77 564 aaKnown RBP7.42□□□□□ -1.22
CHD8-207ENST00000554384 PRDM7Q9NQW5 492 aa7.42□□□□□ -1.22
CHD8-207ENST00000554384 IFT57Q9NWB7 429 aa7.42□□□□□ -1.22
CHD8-207ENST00000554384 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.41□□□□□ -1.22
CHD8-207ENST00000554384 PLD2O14939 933 aa7.41□□□□□ -1.22
CHD8-207ENST00000554384 MSCO60682 206 aa7.41□□□□□ -1.22
CHD8-207ENST00000554384 CD8BP10966 210 aa7.41□□□□□ -1.22
CHD8-207ENST00000554384 MASP1P48740 699 aa7.41□□□□□ -1.22
CHD8-207ENST00000554384 CEBPAP49715 358 aaPredicted RBP7.41□□□□□ -1.22
CHD8-207ENST00000554384 INF2Q27J81 1249 aa7.41□□□□□ -1.22
CHD8-207ENST00000554384 RNF111Q6ZNA4 994 aa7.41□□□□□ -1.22
CHD8-207ENST00000554384 TMPRSS7Q7RTY8 843 aa7.41□□□□□ -1.22
CHD8-207ENST00000554384 BCL7CQ8WUZ0 217 aaPredicted RBP7.41□□□□□ -1.22
CHD8-207ENST00000554384 SCLYQ96I15 445 aa7.41□□□□□ -1.22
CHD8-207ENST00000554384 SLKQ9H2G2 1235 aaPredicted RBP7.41□□□□□ -1.22
CHD8-207ENST00000554384 VAV3Q9UKW4 847 aa7.41□□□□□ -1.22
CHD8-207ENST00000554384 DNAJC25-GNG10A0A024R161 153 aa7.4□□□□□ -1.22
CHD8-207ENST00000554384 CCDC163A0A0D9SF12 145 aa7.4□□□□□ -1.22
CHD8-207ENST00000554384 FGF10O15520 208 aaPredicted RBP7.4□□□□□ -1.22
CHD8-207ENST00000554384 CPP00450 1065 aa7.4□□□□□ -1.22
CHD8-207ENST00000554384 GP2P55259 537 aaKnown RBP7.4□□□□□ -1.22
CHD8-207ENST00000554384 RCSD1Q6JBY9 416 aa7.4□□□□□ -1.22
CHD8-207ENST00000554384 NFXL1Q6ZNB6 911 aa7.4□□□□□ -1.22
CHD8-207ENST00000554384 BRAPQ7Z569 592 aa7.4□□□□□ -1.22
CHD8-207ENST00000554384 NIM1KQ8IY84 436 aa7.4□□□□□ -1.22
CHD8-207ENST00000554384 ASB11Q8WXH4 323 aa7.4□□□□□ -1.22
CHD8-207ENST00000554384 NINJ1Q92982 152 aa7.4□□□□□ -1.22
CHD8-207ENST00000554384 PTCHD1Q96NR3 888 aa7.4□□□□□ -1.22
CHD8-207ENST00000554384 PHF20Q9BVI0 1012 aa7.4□□□□□ -1.22
CHD8-207ENST00000554384 MRPL4Q9BYD3 311 aaKnown RBP7.4□□□□□ -1.22
CHD8-207ENST00000554384 ADAMTS10Q9H324 1103 aa7.4□□□□□ -1.22
CHD8-207ENST00000554384 TRIM39Q9HCM9 518 aa7.4□□□□□ -1.22
CHD8-207ENST00000554384 PAX4O43316 350 aa7.39□□□□□ -1.23
CHD8-207ENST00000554384 DNAJC8O75937 253 aaPredicted RBP7.39□□□□□ -1.23
CHD8-207ENST00000554384 RASGRP1O95267 797 aa7.39□□□□□ -1.23
CHD8-207ENST00000554384 MYCLP1P12525 358 aaPredicted RBP7.39□□□□□ -1.23
CHD8-207ENST00000554384 TAL1P17542 331 aaPredicted RBP7.39□□□□□ -1.23
CHD8-207ENST00000554384 IRAK1P51617 712 aa7.39□□□□□ -1.23
CHD8-207ENST00000554384 RALGPS1Q5JS13 557 aa7.39□□□□□ -1.23
CHD8-207ENST00000554384 SYNPOQ8N3V7 929 aa7.39□□□□□ -1.23
CHD8-207ENST00000554384 UBR7Q8N806 425 aa7.39□□□□□ -1.23
CHD8-207ENST00000554384 BSDC1Q9NW68 430 aaPredicted RBP7.39□□□□□ -1.23
CHD8-207ENST00000554384 ERVK13-1Q9NX77 482 aa7.39□□□□□ -1.23
CHD8-207ENST00000554384 SFMBT1Q9UHJ3 866 aa7.39□□□□□ -1.23
CHD8-207ENST00000554384 ZNF281Q9Y2X9 895 aa7.39□□□□□ -1.23
CHD8-207ENST00000554384 PCDHA9Q9Y5H5 950 aa7.39□□□□□ -1.23
CHD8-207ENST00000554384 NPHP3-ACAD11A0A0J9YXS1 232 aa7.38□□□□□ -1.23
CHD8-207ENST00000554384 MEFVO15553 781 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms