RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 PTPROQ16827 1216 aa13.56□□□□□ -0.24
SPTB-206ENST00000553938 RNF41Q9H4P4 317 aaPredicted RBP13.56□□□□□ -0.24
SPTB-206ENST00000553938 VAT1LQ9HCJ6 419 aa13.56□□□□□ -0.24
SPTB-206ENST00000553938 MCM9Q9NXL9 1143 aa13.56□□□□□ -0.24
SPTB-206ENST00000553938 EPN1Q9Y6I3 576 aaPredicted RBP13.56□□□□□ -0.24
SPTB-206ENST00000553938 SLC7A5Q01650 507 aa13.55□□□□□ -0.24
SPTB-206ENST00000553938 NAIF1Q69YI7 327 aaPredicted RBP13.55□□□□□ -0.24
SPTB-206ENST00000553938 HEATR3Q7Z4Q2 680 aa13.55□□□□□ -0.24
SPTB-206ENST00000553938 IQCA1Q86XH1 822 aa13.55□□□□□ -0.24
SPTB-206ENST00000553938 RRP36Q96EU6 259 aaKnown RBP13.55□□□□□ -0.24
SPTB-206ENST00000553938 MLXIPQ9HAP2 919 aa13.55□□□□□ -0.24
SPTB-206ENST00000553938 LIMA1Q9UHB6 759 aaKnown RBP13.55□□□□□ -0.24
SPTB-206ENST00000553938 MYO6Q9UM54 1294 aa13.55□□□□□ -0.24
SPTB-206ENST00000553938 A0A1B0GUL6 1792 aa13.55□□□□□ -0.24
SPTB-206ENST00000553938 IQUBQ8NA54 791 aa13.55□□□□□ -0.24
SPTB-206ENST00000553938 ERVV-1B6SEH8 477 aa13.55□□□□□ -0.24
SPTB-206ENST00000553938 NEBLO76041 1014 aa13.55□□□□□ -0.24
SPTB-206ENST00000553938 GNAT2P19087 354 aa13.55□□□□□ -0.24
SPTB-206ENST00000553938 PDE6BP35913 854 aa13.55□□□□□ -0.24
SPTB-206ENST00000553938 TFAP4Q01664 338 aa13.55□□□□□ -0.24
SPTB-206ENST00000553938 MARCH10Q8NA82 808 aaPredicted RBP13.55□□□□□ -0.24
SPTB-206ENST00000553938 DUSP9Q99956 384 aaKnown RBP13.55□□□□□ -0.24
SPTB-206ENST00000553938 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.55□□□□□ -0.24
SPTB-206ENST00000553938 STK24Q9Y6E0 443 aa13.55□□□□□ -0.24
SPTB-206ENST00000553938 DOT1LQ8TEK3 1739 aa13.55□□□□□ -0.24
SPTB-206ENST00000553938 ZNF804BA4D1E1 1349 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 NCK2O43639 380 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 MAP9Q49MG5 647 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 CCDC178Q5BJE1 867 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 CCDC122Q5T0U0 273 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 TBC1D9BQ66K14 1250 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 CNGA4Q8IV77 575 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 CTCFLQ8NI51 663 aaPredicted RBP13.54□□□□□ -0.24
SPTB-206ENST00000553938 TRIM47Q96LD4 638 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 CTAGE15A4D2H0 777 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 PPP1R12AO14974 1030 aaPredicted RBP13.54□□□□□ -0.24
SPTB-206ENST00000553938 CTAGE8P0CG41 777 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 FILIP1LQ4L180 1135 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 KANK3Q6NY19 840 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 CTAGE6Q86UF2 777 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 CTAGE4Q8IX94 777 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 PROCA1Q8NCQ7 364 aaPredicted RBP13.54□□□□□ -0.24
SPTB-206ENST00000553938 MSANTD4Q8NCY6 345 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 SALL4Q9UJQ4 1053 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 CAPN6Q9Y6Q1 641 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 DCCP43146 1447 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 PHLPP1O60346 1717 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 RTL9Q8NET4 1388 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 GOLGA6L9A6NEM1 432 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 ANKRD40Q6AI12 368 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 MB21D1Q8N884 522 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 COG1Q8WTW3 980 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 TMEM260Q9NX78 707 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 RWDD2AQ9UIY3 292 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 ANAPC4Q9UJX5 808 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 RAB21Q9UL25 225 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 STX8Q9UNK0 236 aa13.54□□□□□ -0.24
SPTB-206ENST00000553938 PFKFB3Q16875 520 aaPredicted RBP13.53□□□□□ -0.24
SPTB-206ENST00000553938 TXNRD1Q16881 649 aa13.53□□□□□ -0.24
SPTB-206ENST00000553938 ZNF658Q5TYW1 1059 aaPredicted RBP13.53□□□□□ -0.24
SPTB-206ENST00000553938 ELOA2Q8IYF1 753 aaPredicted RBP13.53□□□□□ -0.24
SPTB-206ENST00000553938 ADSSL1Q8N142 457 aa13.53□□□□□ -0.24
SPTB-206ENST00000553938 SH3RF3Q8TEJ3 882 aaPredicted RBP13.53□□□□□ -0.24
SPTB-206ENST00000553938 FERMT2Q96AC1 680 aa13.53□□□□□ -0.24
SPTB-206ENST00000553938 FAM204AQ9H8W3 233 aa13.53□□□□□ -0.24
SPTB-206ENST00000553938 DISC1Q9NRI5 854 aa13.53□□□□□ -0.24
SPTB-206ENST00000553938 SYF2O95926 243 aaKnown RBP13.53□□□□□ -0.24
SPTB-206ENST00000553938 PLCG1P19174 1290 aa13.53□□□□□ -0.24
SPTB-206ENST00000553938 SWT1Q5T5J6 900 aaKnown RBP13.53□□□□□ -0.24
SPTB-206ENST00000553938 TMCO4Q5TGY1 634 aa13.53□□□□□ -0.24
SPTB-206ENST00000553938 CYP26C1Q6V0L0 522 aa13.53□□□□□ -0.24
SPTB-206ENST00000553938 ANKRD18AQ8IVF6 992 aa13.53□□□□□ -0.24
SPTB-206ENST00000553938 SUGP1Q8IWZ8 645 aaKnown RBP13.53□□□□□ -0.24
SPTB-206ENST00000553938 SLC39A2Q9NP94 309 aa13.53□□□□□ -0.24
SPTB-206ENST00000553938 GTPBP6O43824 516 aaPredicted RBP13.52□□□□□ -0.24
SPTB-206ENST00000553938 BLIDQ8IZY5 108 aa13.52□□□□□ -0.24
SPTB-206ENST00000553938 ZNF507Q8TCN5 953 aa13.52□□□□□ -0.24
SPTB-206ENST00000553938 PCDHA6Q9UN73 950 aa13.52□□□□□ -0.24
SPTB-206ENST00000553938 PCDHA8Q9Y5H6 950 aa13.52□□□□□ -0.24
SPTB-206ENST00000553938 ZC3H4Q9UPT8 1303 aaKnown RBP13.52□□□□□ -0.24
SPTB-206ENST00000553938 ZSCAN5CA6NGD5 496 aaPredicted RBP13.52□□□□□ -0.25
SPTB-206ENST00000553938 MPHOSPH10O00566 681 aaKnown RBP13.52□□□□□ -0.25
SPTB-206ENST00000553938 MAFGO15525 162 aa13.52□□□□□ -0.25
SPTB-206ENST00000553938 TUBB4AP04350 444 aa13.52□□□□□ -0.25
SPTB-206ENST00000553938 XBP1P17861 261 aa13.52□□□□□ -0.25
SPTB-206ENST00000553938 LRRC41Q15345 812 aa13.52□□□□□ -0.25
SPTB-206ENST00000553938 LETM2Q2VYF4 491 aa13.52□□□□□ -0.25
SPTB-206ENST00000553938 PNMA1Q8ND90 353 aa13.52□□□□□ -0.25
SPTB-206ENST00000553938 NUDT12Q9BQG2 462 aa13.52□□□□□ -0.25
SPTB-206ENST00000553938 FAM207AQ9NSI2 230 aaPredicted RBP13.52□□□□□ -0.25
SPTB-206ENST00000553938 LRRC10BA6NIK2 292 aa13.52□□□□□ -0.25
SPTB-206ENST00000553938 EIF6P56537 245 aaKnown RBP13.52□□□□□ -0.25
SPTB-206ENST00000553938 USP17L2Q6R6M4 530 aa13.52□□□□□ -0.25
SPTB-206ENST00000553938 DYMQ7RTS9 669 aa13.52□□□□□ -0.25
SPTB-206ENST00000553938 TRAPPC11Q7Z392 1133 aa13.52□□□□□ -0.25
SPTB-206ENST00000553938 LINC00116Q8NCU8 138 aa13.52□□□□□ -0.25
SPTB-206ENST00000553938 PCMTD1Q96MG8 357 aaPredicted RBP13.52□□□□□ -0.25
SPTB-206ENST00000553938 UBA5Q9GZZ9 404 aa13.52□□□□□ -0.25
SPTB-206ENST00000553938 LRWD1Q9UFC0 647 aa13.52□□□□□ -0.25
SPTB-206ENST00000553938 MAD2L2Q9UI95 211 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms