RNA–Protein interactions for RNA: ENST00000553899.5

PSMC6-205, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-205ENST00000553899 PIK3CDO00329 1044 aa15.69■□□□□ 0.1
PSMC6-205ENST00000553899 PPP1R11O60927 126 aaPredicted RBP15.69■□□□□ 0.1
PSMC6-205ENST00000553899 HOMER1Q86YM7 354 aa15.69■□□□□ 0.1
PSMC6-205ENST00000553899 AGBL1Q96MI9 1066 aa15.69■□□□□ 0.1
PSMC6-205ENST00000553899 PAGR1Q9BTK6 254 aa15.69■□□□□ 0.1
PSMC6-205ENST00000553899 RAVER2Q9HCJ3 691 aaKnown RBP15.69■□□□□ 0.1
PSMC6-205ENST00000553899 ORC3Q9UBD5 711 aaPredicted RBP15.69■□□□□ 0.1
PSMC6-205ENST00000553899 CPA4Q9UI42 421 aa15.69■□□□□ 0.1
PSMC6-205ENST00000553899 PFASO15067 1338 aa15.68■□□□□ 0.1
PSMC6-205ENST00000553899 MGAMO43451 1857 aa15.68■□□□□ 0.1
PSMC6-205ENST00000553899 LOC102724159A0A0B4J2E5 919 aa15.68■□□□□ 0.1
PSMC6-205ENST00000553899 TBC1D8O95759 1140 aa15.68■□□□□ 0.1
PSMC6-205ENST00000553899 FDPSP14324 419 aaKnown RBP15.68■□□□□ 0.1
PSMC6-205ENST00000553899 ERCC3P19447 782 aa15.68■□□□□ 0.1
PSMC6-205ENST00000553899 LACTBP83111 547 aaPredicted RBP15.68■□□□□ 0.1
PSMC6-205ENST00000553899 KIF22Q14807 665 aa15.68■□□□□ 0.1
PSMC6-205ENST00000553899 PWP2Q15269 919 aaKnown RBP15.68■□□□□ 0.1
PSMC6-205ENST00000553899 CPXCR1Q8N123 301 aa15.68■□□□□ 0.1
PSMC6-205ENST00000553899 CCDC148Q8NFR7 591 aa15.68■□□□□ 0.1
PSMC6-205ENST00000553899 TRERF1Q96PN7 1200 aa15.68■□□□□ 0.1
PSMC6-205ENST00000553899 ZMYND12Q9H0C1 365 aa15.68■□□□□ 0.1
PSMC6-205ENST00000553899 ACAD9Q9H845 621 aa15.68■□□□□ 0.1
PSMC6-205ENST00000553899 RBBP6Q7Z6E9 1792 aaKnown RBP15.67■□□□□ 0.1
PSMC6-205ENST00000553899 FKTNO75072 461 aa15.67■□□□□ 0.1
PSMC6-205ENST00000553899 FCER1AP12319 257 aa15.67■□□□□ 0.1
PSMC6-205ENST00000553899 PDCP20941 246 aa15.67■□□□□ 0.1
PSMC6-205ENST00000553899 CALML3P27482 149 aa15.67■□□□□ 0.1
PSMC6-205ENST00000553899 GNA11P29992 359 aa15.67■□□□□ 0.1
PSMC6-205ENST00000553899 ANP32AP39687 249 aaKnown RBP15.67■□□□□ 0.1
PSMC6-205ENST00000553899 MRPL12P52815 198 aaKnown RBP15.67■□□□□ 0.1
PSMC6-205ENST00000553899 PLS1Q14651 629 aa15.67■□□□□ 0.1
PSMC6-205ENST00000553899 CCDC174Q6PII3 467 aa15.67■□□□□ 0.1
PSMC6-205ENST00000553899 CCAR1Q8IX12 1150 aaKnown RBP15.67■□□□□ 0.1
PSMC6-205ENST00000553899 BICD2Q8TD16 824 aa15.67■□□□□ 0.1
PSMC6-205ENST00000553899 CLEC4DQ8WXI8 215 aa15.67■□□□□ 0.1
PSMC6-205ENST00000553899 ERO1AQ96HE7 468 aa15.67■□□□□ 0.1
PSMC6-205ENST00000553899 R3HDMLQ9H3Y0 253 aa15.67■□□□□ 0.1
PSMC6-205ENST00000553899 RIPK3Q9Y572 518 aa15.67■□□□□ 0.1
PSMC6-205ENST00000553899 SMCHD1A6NHR9 2005 aa15.67■□□□□ 0.1
PSMC6-205ENST00000553899 SLC15A5A6NIM6 579 aa15.66■□□□□ 0.1
PSMC6-205ENST00000553899 STXBP3O00186 592 aa15.66■□□□□ 0.1
PSMC6-205ENST00000553899 ALAS1P13196 640 aa15.66■□□□□ 0.1
PSMC6-205ENST00000553899 PRMT2P55345 433 aa15.66■□□□□ 0.1
PSMC6-205ENST00000553899 FCGRTP55899 365 aa15.66■□□□□ 0.1
PSMC6-205ENST00000553899 WWC2Q6AWC2 1192 aa15.66■□□□□ 0.1
PSMC6-205ENST00000553899 SAMD1Q6SPF0 538 aaPredicted RBP15.66■□□□□ 0.1
PSMC6-205ENST00000553899 HEATR3Q7Z4Q2 680 aa15.66■□□□□ 0.1
PSMC6-205ENST00000553899 PLEKHH3Q7Z736 793 aa15.66■□□□□ 0.1
PSMC6-205ENST00000553899 SOCS4Q8WXH5 440 aa15.66■□□□□ 0.1
PSMC6-205ENST00000553899 PORCNQ9H237 461 aa15.66■□□□□ 0.1
PSMC6-205ENST00000553899 CWC22Q9HCG8 908 aaKnown RBP15.66■□□□□ 0.1
PSMC6-205ENST00000553899 RNF146Q9NTX7 359 aa15.66■□□□□ 0.1
PSMC6-205ENST00000553899 SMC3Q9UQE7 1217 aa15.66■□□□□ 0.1
PSMC6-205ENST00000553899 DIS3Q9Y2L1 958 aaKnown RBP15.66■□□□□ 0.1
PSMC6-205ENST00000553899 IVNS1ABPQ9Y6Y0 642 aa15.66■□□□□ 0.1
PSMC6-205ENST00000553899 ZNFX1Q9P2E3 1918 aaKnown RBP15.65■□□□□ 0.1
PSMC6-205ENST00000553899 HOXC6P09630 235 aa15.65■□□□□ 0.1
PSMC6-205ENST00000553899 PTPREP23469 700 aa15.65■□□□□ 0.1
PSMC6-205ENST00000553899 HSD17B4P51659 736 aa15.65■□□□□ 0.1
PSMC6-205ENST00000553899 GRB14Q14449 540 aa15.65■□□□□ 0.1
PSMC6-205ENST00000553899 KCTD2Q14681 263 aa15.65■□□□□ 0.1
PSMC6-205ENST00000553899 GPR142Q7Z601 462 aa15.65■□□□□ 0.1
PSMC6-205ENST00000553899 NCAPG2Q86XI2 1143 aa15.65■□□□□ 0.1
PSMC6-205ENST00000553899 FAM184AQ8NB25 1140 aa15.65■□□□□ 0.1
PSMC6-205ENST00000553899 DAGLBQ8NCG7 672 aa15.65■□□□□ 0.1
PSMC6-205ENST00000553899 CUL5Q93034 780 aa15.65■□□□□ 0.1
PSMC6-205ENST00000553899 COA7Q96BR5 231 aa15.65■□□□□ 0.1
PSMC6-205ENST00000553899 PSTPIP2Q9H939 334 aa15.65■□□□□ 0.1
PSMC6-205ENST00000553899 C6orf50Q9HD87 102 aa15.65■□□□□ 0.1
PSMC6-205ENST00000553899 RIC8AQ9NPQ8 531 aa15.65■□□□□ 0.1
PSMC6-205ENST00000553899 SLC5A4Q9NY91 659 aa15.65■□□□□ 0.1
PSMC6-205ENST00000553899 CASP8AP2Q9UKL3 1982 aa15.64■□□□□ 0.09
PSMC6-205ENST00000553899 DNAJC25-GNG10A0A024R161 153 aa15.64■□□□□ 0.09
PSMC6-205ENST00000553899 OPLAHO14841 1288 aa15.64■□□□□ 0.09
PSMC6-205ENST00000553899 JAK2O60674 1132 aa15.64■□□□□ 0.09
PSMC6-205ENST00000553899 FOSP01100 380 aaPredicted RBP15.64■□□□□ 0.09
PSMC6-205ENST00000553899 XRCC5P13010 732 aaKnown RBP15.64■□□□□ 0.09
PSMC6-205ENST00000553899 HOXD10P28358 340 aa15.64■□□□□ 0.09
PSMC6-205ENST00000553899 CTCFP49711 727 aaPredicted RBP15.64■□□□□ 0.09
PSMC6-205ENST00000553899 NAPAP54920 295 aa15.64■□□□□ 0.09
PSMC6-205ENST00000553899 SNAP25P60880 206 aa15.64■□□□□ 0.09
PSMC6-205ENST00000553899 USH1GQ495M9 461 aa15.64■□□□□ 0.09
PSMC6-205ENST00000553899 MORN1Q5T089 497 aa15.64■□□□□ 0.09
PSMC6-205ENST00000553899 ZNF467Q7Z7K2 595 aaPredicted RBP15.64■□□□□ 0.09
PSMC6-205ENST00000553899 FBXO18Q8NFZ0 1043 aa15.64■□□□□ 0.09
PSMC6-205ENST00000553899 ALG1Q9BT22 464 aa15.64■□□□□ 0.09
PSMC6-205ENST00000553899 PHF20Q9BVI0 1012 aa15.64■□□□□ 0.09
PSMC6-205ENST00000553899 TSHZ2Q9NRE2 1034 aa15.64■□□□□ 0.09
PSMC6-205ENST00000553899 CYP39A1Q9NYL5 469 aa15.64■□□□□ 0.09
PSMC6-205ENST00000553899 PLXNB2O15031 1838 aa15.64■□□□□ 0.09
PSMC6-205ENST00000553899 hCG_1642624A0A1W2PR95 340 aa15.63■□□□□ 0.09
PSMC6-205ENST00000553899 GCOM1H8Y6P7 765 aaPredicted RBP15.63■□□□□ 0.09
PSMC6-205ENST00000553899 HSP90AA1P07900 732 aaKnown RBP15.63■□□□□ 0.09
PSMC6-205ENST00000553899 POLR2MP0CAP2 368 aa15.63■□□□□ 0.09
PSMC6-205ENST00000553899 GJB2P29033 226 aa15.63■□□□□ 0.09
PSMC6-205ENST00000553899 PSMC4P43686 418 aa15.63■□□□□ 0.09
PSMC6-205ENST00000553899 TRIM29Q14134 588 aa15.63■□□□□ 0.09
PSMC6-205ENST00000553899 TRMT44Q8IYL2 757 aaKnown RBP15.63■□□□□ 0.09
PSMC6-205ENST00000553899 ANKRD35Q8N283 1001 aa15.63■□□□□ 0.09
PSMC6-205ENST00000553899 MSL3Q8N5Y2 521 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms