RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 CEP85Q6P2H3 762 aa10.93□□□□□ -0.66
PRKCH-208ENST00000553846 CTR9Q6PD62 1173 aa10.93□□□□□ -0.66
PRKCH-208ENST00000553846 PRPF38AQ8NAV1 312 aaKnown RBP10.93□□□□□ -0.66
PRKCH-208ENST00000553846 CHST13Q8NET6 341 aa10.93□□□□□ -0.66
PRKCH-208ENST00000553846 HLA-CQ95604 372 aa10.93□□□□□ -0.66
PRKCH-208ENST00000553846 VTI1AQ96AJ9 217 aa10.93□□□□□ -0.66
PRKCH-208ENST00000553846 RAVER2Q9HCJ3 691 aaKnown RBP10.93□□□□□ -0.66
PRKCH-208ENST00000553846 PRR33A8MZF0 331 aa10.92□□□□□ -0.66
PRKCH-208ENST00000553846 GOLIM4O00461 696 aa10.92□□□□□ -0.66
PRKCH-208ENST00000553846 RLBP1P12271 317 aa10.92□□□□□ -0.66
PRKCH-208ENST00000553846 TNFAIP2Q03169 654 aa10.92□□□□□ -0.66
PRKCH-208ENST00000553846 SKIV2LQ15477 1246 aaKnown RBP10.92□□□□□ -0.66
PRKCH-208ENST00000553846 RPUSD2Q8IZ73 545 aaKnown RBP10.92□□□□□ -0.66
PRKCH-208ENST00000553846 MORC4Q8TE76 937 aa10.92□□□□□ -0.66
PRKCH-208ENST00000553846 SLC9A7Q96T83 725 aa10.92□□□□□ -0.66
PRKCH-208ENST00000553846 CERS4Q9HA82 394 aa10.92□□□□□ -0.66
PRKCH-208ENST00000553846 A1CFQ9NQ94 594 aaKnown RBP10.92□□□□□ -0.66
PRKCH-208ENST00000553846 TRMT13Q9NUP7 481 aaKnown RBP10.92□□□□□ -0.66
PRKCH-208ENST00000553846 NYAP2Q9P242 653 aa10.92□□□□□ -0.66
PRKCH-208ENST00000553846 FBXO40Q9UH90 709 aa10.92□□□□□ -0.66
PRKCH-208ENST00000553846 Q9Y3F1 56 aa10.92□□□□□ -0.66
PRKCH-208ENST00000553846 SIP14410 1827 aa10.92□□□□□ -0.66
PRKCH-208ENST00000553846 DMDP11532 3685 aa10.92□□□□□ -0.66
PRKCH-208ENST00000553846 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.91□□□□□ -0.66
PRKCH-208ENST00000553846 ZBBXA8MT70 800 aa10.91□□□□□ -0.66
PRKCH-208ENST00000553846 GTPBP6O43824 516 aaPredicted RBP10.91□□□□□ -0.66
PRKCH-208ENST00000553846 CYP2C9P11712 490 aa10.91□□□□□ -0.66
PRKCH-208ENST00000553846 MRE11P49959 708 aa10.91□□□□□ -0.66
PRKCH-208ENST00000553846 GPNMBQ14956 572 aa10.91□□□□□ -0.66
PRKCH-208ENST00000553846 HERC6Q8IVU3 1022 aa10.91□□□□□ -0.66
PRKCH-208ENST00000553846 CPXCR1Q8N123 301 aa10.91□□□□□ -0.66
PRKCH-208ENST00000553846 ANKRD35Q8N283 1001 aa10.91□□□□□ -0.66
PRKCH-208ENST00000553846 PHOSPHO2Q8TCD6 241 aa10.91□□□□□ -0.66
PRKCH-208ENST00000553846 ARNTL2Q8WYA1 636 aa10.91□□□□□ -0.66
PRKCH-208ENST00000553846 MKL1Q969V6 931 aa10.91□□□□□ -0.66
PRKCH-208ENST00000553846 CTAGE1Q96RT6 745 aa10.91□□□□□ -0.66
PRKCH-208ENST00000553846 PDGFCQ9NRA1 345 aa10.91□□□□□ -0.66
PRKCH-208ENST00000553846 SYNPO2Q9UMS6 1093 aa10.91□□□□□ -0.66
PRKCH-208ENST00000553846 EXOC6BQ9Y2D4 811 aa10.91□□□□□ -0.66
PRKCH-208ENST00000553846 PLIN4Q96Q06 1357 aa10.9□□□□□ -0.66
PRKCH-208ENST00000553846 DCHS1Q96JQ0 3298 aa10.9□□□□□ -0.66
PRKCH-208ENST00000553846 TNKSO95271 1327 aa10.9□□□□□ -0.66
PRKCH-208ENST00000553846 LCHNA4D1U4 455 aa10.9□□□□□ -0.66
PRKCH-208ENST00000553846 PURAQ00577 322 aaKnown RBP10.9□□□□□ -0.66
PRKCH-208ENST00000553846 NHLH1Q02575 133 aa10.9□□□□□ -0.66
PRKCH-208ENST00000553846 FAM178BQ8IXR5 827 aa10.9□□□□□ -0.66
PRKCH-208ENST00000553846 RHPN1Q8TCX5 695 aa10.9□□□□□ -0.66
PRKCH-208ENST00000553846 SNX27Q96L92 541 aa10.9□□□□□ -0.66
PRKCH-208ENST00000553846 IL1RAPL2Q9NP60 686 aa10.9□□□□□ -0.66
PRKCH-208ENST00000553846 LMCD1Q9NZU5 365 aa10.9□□□□□ -0.66
PRKCH-208ENST00000553846 PITPNM1O00562 1244 aa10.89□□□□□ -0.67
PRKCH-208ENST00000553846 ZBED4O75132 1171 aa10.89□□□□□ -0.67
PRKCH-208ENST00000553846 RFC2P35250 354 aa10.89□□□□□ -0.67
PRKCH-208ENST00000553846 UBE3CQ15386 1083 aa10.89□□□□□ -0.67
PRKCH-208ENST00000553846 SBK1Q52WX2 424 aa10.89□□□□□ -0.67
PRKCH-208ENST00000553846 ERC1Q8IUD2 1116 aa10.89□□□□□ -0.67
PRKCH-208ENST00000553846 FBXO16Q8IX29 292 aaPredicted RBP10.89□□□□□ -0.67
PRKCH-208ENST00000553846 GMCL1P1Q8NEA9 526 aa10.89□□□□□ -0.67
PRKCH-208ENST00000553846 FRAT1Q92837 279 aaPredicted RBP10.89□□□□□ -0.67
PRKCH-208ENST00000553846 KIFC2Q96AC6 838 aa10.89□□□□□ -0.67
PRKCH-208ENST00000553846 ACAD9Q9H845 621 aa10.89□□□□□ -0.67
PRKCH-208ENST00000553846 FEM1BQ9UK73 627 aa10.89□□□□□ -0.67
PRKCH-208ENST00000553846 CACNA1HO95180 2353 aa10.89□□□□□ -0.67
PRKCH-208ENST00000553846 ATG2AQ2TAZ0 1938 aa10.88□□□□□ -0.67
PRKCH-208ENST00000553846 RBM47A0AV96 593 aaKnown RBP10.88□□□□□ -0.67
PRKCH-208ENST00000553846 POTEB3A0JP26 581 aa10.88□□□□□ -0.67
PRKCH-208ENST00000553846 ASB14A6NK59 587 aa10.88□□□□□ -0.67
PRKCH-208ENST00000553846 DYNC1LI2O43237 492 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-208ENST00000553846 IQCF3P0C7M6 154 aa10.88□□□□□ -0.67
PRKCH-208ENST00000553846 COL19A1Q14993 1142 aa10.88□□□□□ -0.67
PRKCH-208ENST00000553846 LEXMQ3ZCV2 418 aa10.88□□□□□ -0.67
PRKCH-208ENST00000553846 ZKSCAN2Q63HK3 967 aa10.88□□□□□ -0.67
PRKCH-208ENST00000553846 IQSEC1Q6DN90 963 aa10.88□□□□□ -0.67
PRKCH-208ENST00000553846 POTEBQ6S5H4 581 aa10.88□□□□□ -0.67
PRKCH-208ENST00000553846 DEFB128Q7Z7B8 93 aa10.88□□□□□ -0.67
PRKCH-208ENST00000553846 RPAP2Q8IXW5 612 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-208ENST00000553846 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-208ENST00000553846 GDPD5Q8WTR4 605 aa10.88□□□□□ -0.67
PRKCH-208ENST00000553846 DNAJC2Q99543 621 aaKnown RBP10.88□□□□□ -0.67
PRKCH-208ENST00000553846 PUS7LQ9H0K6 701 aaKnown RBP10.88□□□□□ -0.67
PRKCH-208ENST00000553846 UBE2ZQ9H832 354 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-208ENST00000553846 HOMER2Q9NSB8 354 aa10.88□□□□□ -0.67
PRKCH-208ENST00000553846 PAG1Q9NWQ8 432 aa10.88□□□□□ -0.67
PRKCH-208ENST00000553846 CYP39A1Q9NYL5 469 aa10.88□□□□□ -0.67
PRKCH-208ENST00000553846 ARPP21Q9UBL0 812 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-208ENST00000553846 TRIP12Q14669 1992 aaPredicted RBP10.88□□□□□ -0.67
PRKCH-208ENST00000553846 TECTAO75443 2155 aa10.87□□□□□ -0.67
PRKCH-208ENST00000553846 VPS13AQ96RL7 3174 aa10.87□□□□□ -0.67
PRKCH-208ENST00000553846 GSG1L2A8MUP6 293 aa10.87□□□□□ -0.67
PRKCH-208ENST00000553846 RBAK-RBAKDNI3L0D1 243 aa10.87□□□□□ -0.67
PRKCH-208ENST00000553846 BAIAP3O94812 1187 aa10.87□□□□□ -0.67
PRKCH-208ENST00000553846 WDR5P61964 334 aaKnown RBP10.87□□□□□ -0.67
PRKCH-208ENST00000553846 MKRN4PQ13434 485 aaPredicted RBP10.87□□□□□ -0.67
PRKCH-208ENST00000553846 TCTN1Q2MV58 587 aa10.87□□□□□ -0.67
PRKCH-208ENST00000553846 DUSP28Q4G0W2 176 aa10.87□□□□□ -0.67
PRKCH-208ENST00000553846 GJD3Q8N144 294 aa10.87□□□□□ -0.67
PRKCH-208ENST00000553846 CEP95Q96GE4 821 aa10.87□□□□□ -0.67
PRKCH-208ENST00000553846 HAUS7Q99871 368 aa10.87□□□□□ -0.67
PRKCH-208ENST00000553846 AP5M1Q9H0R1 490 aa10.87□□□□□ -0.67
PRKCH-208ENST00000553846 SUGCTQ9HAC7 445 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms