RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 COL25A1Q9BXS0 654 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-210ENST00000553779 UPF3AQ9H1J1 476 aaKnown RBP11.7□□□□□ -0.54
ACTN1-210ENST00000553779 PTPDC1A2A3K4 754 aa11.69□□□□□ -0.54
ACTN1-210ENST00000553779 NMT2O60551 498 aa11.69□□□□□ -0.54
ACTN1-210ENST00000553779 CABYRO75952 493 aa11.69□□□□□ -0.54
ACTN1-210ENST00000553779 FSCN1Q16658 493 aaKnown RBP11.69□□□□□ -0.54
ACTN1-210ENST00000553779 ANKRD45Q5TZF3 282 aa11.69□□□□□ -0.54
ACTN1-210ENST00000553779 RCSD1Q6JBY9 416 aa11.69□□□□□ -0.54
ACTN1-210ENST00000553779 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.69□□□□□ -0.54
ACTN1-210ENST00000553779 FBXO16Q8IX29 292 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-210ENST00000553779 DCAF4Q8WV16 495 aa11.69□□□□□ -0.54
ACTN1-210ENST00000553779 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.69□□□□□ -0.543e-11■■□□□ 14.4
ACTN1-210ENST00000553779 TTYH1Q9H313 450 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-210ENST00000553779 ADD3Q9UEY8 706 aaKnown RBP11.69□□□□□ -0.54
ACTN1-210ENST00000553779 MSRAQ9UJ68 235 aa11.69□□□□□ -0.54
ACTN1-210ENST00000553779 TBX21Q9UL17 535 aa11.69□□□□□ -0.54
ACTN1-210ENST00000553779 TANC1Q9C0D5 1861 aa11.69□□□□□ -0.54
ACTN1-210ENST00000553779 TRIM6-TRIM34B2RNG4 842 aa11.68□□□□□ -0.54
ACTN1-210ENST00000553779 DYNC1LI2O43237 492 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-210ENST00000553779 ADCY6O43306 1168 aa11.68□□□□□ -0.54
ACTN1-210ENST00000553779 CSF2RAP15509 400 aa11.68□□□□□ -0.54
ACTN1-210ENST00000553779 IRX5P78411 483 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-210ENST00000553779 CXCL17Q6UXB2 119 aa11.68□□□□□ -0.54
ACTN1-210ENST00000553779 FAM133AQ8N9E0 248 aa11.68□□□□□ -0.54
ACTN1-210ENST00000553779 PPM1EQ8WY54 764 aa11.68□□□□□ -0.54
ACTN1-210ENST00000553779 EVI5LQ96CN4 794 aa11.68□□□□□ -0.54
ACTN1-210ENST00000553779 HIPK3Q9H422 1215 aa11.68□□□□□ -0.54
ACTN1-210ENST00000553779 GPHNQ9NQX3 736 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-210ENST00000553779 PRR12Q9ULL5 1215 aa11.68□□□□□ -0.54
ACTN1-210ENST00000553779 VCANP13611 3396 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 FRMPD2Q68DX3 1309 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-210ENST00000553779 RAD50Q92878 1312 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-210ENST00000553779 ACRP10323 421 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 CYP2C18P33260 490 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 ITGA7Q13683 1181 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 RAB30Q15771 203 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 BRDTQ58F21 947 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-210ENST00000553779 SYDE2Q5VT97 1194 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 CCSAPQ6IQ19 270 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-210ENST00000553779 KIAA1211Q6ZU35 1233 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 FAM126BQ8IXS8 530 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 IL27Q8NEV9 243 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 FGD4Q96M96 766 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 ZNF576Q9H609 170 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 VTA1Q9NP79 307 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 GPCPD1Q9NPB8 672 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 CYP39A1Q9NYL5 469 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 PCDHB15Q9Y5E8 787 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 TCF20Q9UGU0 1960 aaKnown RBP11.67□□□□□ -0.54
ACTN1-210ENST00000553779 SCN10AQ9Y5Y9 1956 aa11.67□□□□□ -0.54
ACTN1-210ENST00000553779 ZNF536O15090 1300 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 KAT6AQ92794 2004 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 SOWAHBA6NEL2 793 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 ZBBXA8MT70 800 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 PLA2G6O60733 806 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 ICAM1P05362 532 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 MYL3P08590 195 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 TOP1P11387 765 aaKnown RBP11.66□□□□□ -0.54
ACTN1-210ENST00000553779 CALML3P27482 149 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 SLC16A2P36021 539 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 MFAP1P55081 439 aaKnown RBP11.66□□□□□ -0.54
ACTN1-210ENST00000553779 RRP1P56182 461 aaKnown RBP11.66□□□□□ -0.54
ACTN1-210ENST00000553779 PDE4DQ08499 809 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 MUM1L1Q5H9M0 696 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 FAM47CQ5HY64 1035 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 IQSEC1Q6DN90 963 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 ZNF365Q70YC5 407 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 RASGRP2Q7LDG7 609 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 SYMPKQ92797 1274 aaKnown RBP11.66□□□□□ -0.54
ACTN1-210ENST00000553779 RILPL2Q969X0 211 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 IL23AQ9NPF7 189 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 HELLSQ9NRZ9 838 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 PNMA2Q9UL42 364 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.66□□□□□ -0.54
ACTN1-210ENST00000553779 CHD9Q3L8U1 2897 aa11.66□□□□□ -0.54
ACTN1-210ENST00000553779 B4DLN1 442 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 ORC4O43929 436 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 FGBP02675 491 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 SMPD1P17405 629 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 IGFBP4P22692 258 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 CPT1AP50416 773 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 CDK7P50613 346 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 MRPL12P52815 198 aaKnown RBP11.65□□□□□ -0.54
ACTN1-210ENST00000553779 CCL23P55773 120 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 CHMP4BP1P59074 171 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 HAND2P61296 217 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 GRIN2CQ14957 1233 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 MCMDC2Q4G0Z9 681 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 TMEM240Q5SV17 173 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 VPS53Q5VIR6 699 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 OR6J1Q8NGC5 347 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 SEZ6LQ9BYH1 1024 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 INCENPQ9NQS7 918 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 PDGFCQ9NRA1 345 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 POLR3EQ9NVU0 708 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 NOD1Q9Y239 953 aa11.65□□□□□ -0.54
ACTN1-210ENST00000553779 DDX49Q9Y6V7 483 aaKnown RBP11.65□□□□□ -0.54
ACTN1-210ENST00000553779 BAZ2BQ9UIF8 2168 aaKnown RBP11.65□□□□□ -0.54
ACTN1-210ENST00000553779 TRANK1O15050 2925 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms