RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 MGAMO43451 1857 aa20.82■□□□□ 0.92
PSEN1-208ENST00000553719 SLC25A27O95847 323 aa20.82■□□□□ 0.92
PSEN1-208ENST00000553719 COPB2P35606 906 aa20.82■□□□□ 0.92
PSEN1-208ENST00000553719 CCNA1P78396 465 aa20.82■□□□□ 0.92
PSEN1-208ENST00000553719 AKAP17AQ02040 695 aaKnown RBP20.82■□□□□ 0.92
PSEN1-208ENST00000553719 PLS1Q14651 629 aa20.82■□□□□ 0.92
PSEN1-208ENST00000553719 USH1GQ495M9 461 aa20.82■□□□□ 0.92
PSEN1-208ENST00000553719 RNF146Q9NTX7 359 aa20.82■□□□□ 0.92
PSEN1-208ENST00000553719 PLXNB2O15031 1838 aa20.81■□□□□ 0.92
PSEN1-208ENST00000553719 ALAS1P13196 640 aa20.81■□□□□ 0.92
PSEN1-208ENST00000553719 ERCC3P19447 782 aa20.81■□□□□ 0.92
PSEN1-208ENST00000553719 CTGFP29279 349 aa20.81■□□□□ 0.92
PSEN1-208ENST00000553719 TRAF1Q13077 416 aa20.81■□□□□ 0.92
PSEN1-208ENST00000553719 BECN1Q14457 450 aa20.81■□□□□ 0.92
PSEN1-208ENST00000553719 MUM1L1Q5H9M0 696 aa20.81■□□□□ 0.92
PSEN1-208ENST00000553719 HEATR3Q7Z4Q2 680 aa20.81■□□□□ 0.92
PSEN1-208ENST00000553719 FAM177A1Q8N128 213 aaPredicted RBP20.81■□□□□ 0.92
PSEN1-208ENST00000553719 CHST13Q8NET6 341 aa20.81■□□□□ 0.92
PSEN1-208ENST00000553719 MROH8Q9H579 483 aa20.81■□□□□ 0.92
PSEN1-208ENST00000553719 EFCC1Q9HA90 598 aa20.81■□□□□ 0.92
PSEN1-208ENST00000553719 LCTP09848 1927 aa20.8■□□□□ 0.92
PSEN1-208ENST00000553719 ESYT2A0FGR8 921 aa20.8■□□□□ 0.92
PSEN1-208ENST00000553719 GPR25O00155 361 aa20.8■□□□□ 0.92
PSEN1-208ENST00000553719 NFIBO00712 420 aa20.8■□□□□ 0.92
PSEN1-208ENST00000553719 CAP1Q01518 475 aa20.8■□□□□ 0.92
PSEN1-208ENST00000553719 TRERF1Q96PN7 1200 aa20.8■□□□□ 0.92
PSEN1-208ENST00000553719 ACAD9Q9H845 621 aa20.8■□□□□ 0.92
PSEN1-208ENST00000553719 SH3GLB2Q9NR46 395 aa20.8■□□□□ 0.92
PSEN1-208ENST00000553719 GJB2P29033 226 aa20.79■□□□□ 0.92
PSEN1-208ENST00000553719 MAPK4P31152 587 aa20.79■□□□□ 0.92
PSEN1-208ENST00000553719 ANP32AP39687 249 aaKnown RBP20.79■□□□□ 0.92
PSEN1-208ENST00000553719 LACTBP83111 547 aaPredicted RBP20.79■□□□□ 0.92
PSEN1-208ENST00000553719 NPY5RQ15761 445 aa20.79■□□□□ 0.92
PSEN1-208ENST00000553719 RGS22Q8NE09 1264 aa20.79■□□□□ 0.92
PSEN1-208ENST00000553719 WASF1Q92558 559 aa20.79■□□□□ 0.92
PSEN1-208ENST00000553719 ALG1Q9BT22 464 aa20.79■□□□□ 0.92
PSEN1-208ENST00000553719 MAF1Q9H063 256 aa20.79■□□□□ 0.92
PSEN1-208ENST00000553719 HOMER2Q9NSB8 354 aa20.79■□□□□ 0.92
PSEN1-208ENST00000553719 VPS54Q9P1Q0 977 aa20.79■□□□□ 0.92
PSEN1-208ENST00000553719 FBXO40Q9UH90 709 aa20.79■□□□□ 0.92
PSEN1-208ENST00000553719 SMC3Q9UQE7 1217 aa20.79■□□□□ 0.92
PSEN1-208ENST00000553719 MRPL11Q9Y3B7 192 aaKnown RBP20.79■□□□□ 0.92
PSEN1-208ENST00000553719 SP3Q02447 781 aa20.78■□□□□ 0.92
PSEN1-208ENST00000553719 NCAPG2Q86XI2 1143 aa20.78■□□□□ 0.92
PSEN1-208ENST00000553719 BEGAINQ9BUH8 593 aa20.78■□□□□ 0.92
PSEN1-208ENST00000553719 ZMYND12Q9H0C1 365 aa20.78■□□□□ 0.92
PSEN1-208ENST00000553719 GJB4Q9NTQ9 266 aa20.78■□□□□ 0.92
PSEN1-208ENST00000553719 DOCK3Q8IZD9 2030 aa20.77■□□□□ 0.92
PSEN1-208ENST00000553719 NAPAP54920 295 aa20.77■□□□□ 0.92
PSEN1-208ENST00000553719 GPR142Q7Z601 462 aa20.77■□□□□ 0.92
PSEN1-208ENST00000553719 TEX2Q8IWB9 1127 aa20.77■□□□□ 0.92
PSEN1-208ENST00000553719 ABRAQ8N0Z2 381 aa20.77■□□□□ 0.92
PSEN1-208ENST00000553719 CCDC148Q8NFR7 591 aa20.77■□□□□ 0.92
PSEN1-208ENST00000553719 PHF20Q9BVI0 1012 aa20.77■□□□□ 0.92
PSEN1-208ENST00000553719 A1CFQ9NQ94 594 aaKnown RBP20.77■□□□□ 0.92
PSEN1-208ENST00000553719 TSKSQ9UJT2 592 aa20.77■□□□□ 0.92
PSEN1-208ENST00000553719 PIK3CDO00329 1044 aa20.76■□□□□ 0.91
PSEN1-208ENST00000553719 ADAMTS3O15072 1205 aa20.76■□□□□ 0.91
PSEN1-208ENST00000553719 HSD17B4P51659 736 aa20.76■□□□□ 0.91
PSEN1-208ENST00000553719 GRB14Q14449 540 aa20.76■□□□□ 0.91
PSEN1-208ENST00000553719 CCDC12Q8WUD4 166 aaPredicted RBP20.76■□□□□ 0.91
PSEN1-208ENST00000553719 ZNF296Q8WUU4 475 aaPredicted RBP20.76■□□□□ 0.91
PSEN1-208ENST00000553719 TBC1D5Q92609 795 aa20.76■□□□□ 0.91
PSEN1-208ENST00000553719 ARHGAP39Q9C0H5 1083 aa20.76■□□□□ 0.91
PSEN1-208ENST00000553719 RIC8AQ9NPQ8 531 aa20.76■□□□□ 0.91
PSEN1-208ENST00000553719 MEIS2O14770 477 aa20.75■□□□□ 0.91
PSEN1-208ENST00000553719 PTPREP23469 700 aa20.75■□□□□ 0.91
PSEN1-208ENST00000553719 SLC4A3P48751 1232 aa20.75■□□□□ 0.91
PSEN1-208ENST00000553719 MORN1Q5T089 497 aa20.75■□□□□ 0.91
PSEN1-208ENST00000553719 PLEKHH3Q7Z736 793 aa20.75■□□□□ 0.91
PSEN1-208ENST00000553719 FAM184AQ8NB25 1140 aa20.75■□□□□ 0.91
PSEN1-208ENST00000553719 DAGLBQ8NCG7 672 aa20.75■□□□□ 0.91
PSEN1-208ENST00000553719 TRIM47Q96LD4 638 aa20.75■□□□□ 0.91
PSEN1-208ENST00000553719 FOXD4L1Q9NU39 408 aa20.75■□□□□ 0.91
PSEN1-208ENST00000553719 CYP39A1Q9NYL5 469 aa20.75■□□□□ 0.91
PSEN1-208ENST00000553719 ZNFX1Q9P2E3 1918 aaKnown RBP20.74■□□□□ 0.91
PSEN1-208ENST00000553719 DNAJC25-GNG10A0A024R161 153 aa20.74■□□□□ 0.91
PSEN1-208ENST00000553719 SMCO2A6NFE2 343 aa20.74■□□□□ 0.91
PSEN1-208ENST00000553719 M0R2N6 131 aa20.74■□□□□ 0.91
PSEN1-208ENST00000553719 STRNO43815 780 aa20.74■□□□□ 0.91
PSEN1-208ENST00000553719 FKTNO75072 461 aa20.74■□□□□ 0.91
PSEN1-208ENST00000553719 CLK2P49760 499 aaKnown RBP20.74■□□□□ 0.91
PSEN1-208ENST00000553719 SLC30A10Q6XR72 485 aa20.74■□□□□ 0.91
PSEN1-208ENST00000553719 MCF2L2Q86YR7 1114 aa20.74■□□□□ 0.91
PSEN1-208ENST00000553719 SAMD3Q8N6K7 520 aa20.74■□□□□ 0.91
PSEN1-208ENST00000553719 FBXO18Q8NFZ0 1043 aa20.74■□□□□ 0.91
PSEN1-208ENST00000553719 USP6NLQ92738 828 aa20.74■□□□□ 0.91
PSEN1-208ENST00000553719 MAP3K20Q9NYL2 800 aaKnown RBP20.74■□□□□ 0.91
PSEN1-208ENST00000553719 KIF3AQ9Y496 699 aa20.74■□□□□ 0.91
PSEN1-208ENST00000553719 HTTP42858 3142 aa20.74■□□□□ 0.91
PSEN1-208ENST00000553719 PFASO15067 1338 aa20.74■□□□□ 0.91
PSEN1-208ENST00000553719 FOXN1O15353 648 aa20.73■□□□□ 0.91
PSEN1-208ENST00000553719 HSPA8P11142 646 aaKnown RBP20.73■□□□□ 0.91
PSEN1-208ENST00000553719 ADCY7P51828 1080 aa20.73■□□□□ 0.91
PSEN1-208ENST00000553719 FCGRTP55899 365 aa20.73■□□□□ 0.91
PSEN1-208ENST00000553719 RPS6P62753 249 aaKnown RBP20.73■□□□□ 0.91
PSEN1-208ENST00000553719 KRT40Q6A162 431 aa20.73■□□□□ 0.91
PSEN1-208ENST00000553719 CD99L2Q8TCZ2 262 aa20.73■□□□□ 0.91
PSEN1-208ENST00000553719 CUL5Q93034 780 aa20.73■□□□□ 0.91
PSEN1-208ENST00000553719 C8orf76Q96K31 380 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms