RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 SCG5P05408 212 aa5.27□□□□□ -1.57
VRK1-202ENST00000553683 ATP2B1P20020 1258 aa5.27□□□□□ -1.57
VRK1-202ENST00000553683 HOXC12P31275 282 aa5.27□□□□□ -1.57
VRK1-202ENST00000553683 L1CAMP32004 1257 aa5.27□□□□□ -1.57
VRK1-202ENST00000553683 SEPHS1P49903 392 aa5.27□□□□□ -1.57
VRK1-202ENST00000553683 YBX1P67809 324 aaKnown RBP5.27□□□□□ -1.57
VRK1-202ENST00000553683 DDR2Q16832 855 aa5.27□□□□□ -1.57
VRK1-202ENST00000553683 SOGA3Q5TF21 947 aa5.27□□□□□ -1.57
VRK1-202ENST00000553683 IQCEQ6IPM2 695 aa5.27□□□□□ -1.57
VRK1-202ENST00000553683 JAMLQ86YT9 394 aa5.27□□□□□ -1.57
VRK1-202ENST00000553683 ST13P5Q8NFI4 369 aaPredicted RBP5.27□□□□□ -1.57
VRK1-202ENST00000553683 SGSM3Q96HU1 749 aa5.27□□□□□ -1.57
VRK1-202ENST00000553683 MMP19Q99542 508 aa5.27□□□□□ -1.57
VRK1-202ENST00000553683 HIRIP3Q9BW71 556 aaPredicted RBP5.27□□□□□ -1.57
VRK1-202ENST00000553683 NKX2-4Q9H2Z4 354 aa5.27□□□□□ -1.57
VRK1-202ENST00000553683 NSUN3Q9H649 340 aaKnown RBP5.27□□□□□ -1.57
VRK1-202ENST00000553683 APEX2Q9UBZ4 518 aa5.27□□□□□ -1.57
VRK1-202ENST00000553683 GJB6O95452 261 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 CPP00450 1065 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 CAPNS1P04632 268 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 MPOP05164 745 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 C8AP07357 584 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 MED14OSP0DP75 135 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 IFNGR1P15260 489 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 PAMP19021 973 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 GLDCP23378 1020 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 CYP4F8P98187 520 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 RBL2Q08999 1139 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 CBX2Q14781 532 aaPredicted RBP5.26□□□□□ -1.57
VRK1-202ENST00000553683 NR1I3Q14994 352 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 SF3A1Q15459 793 aaKnown RBP5.26□□□□□ -1.57
VRK1-202ENST00000553683 TESK1Q15569 626 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 PKN1Q16512 942 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 LRP10Q7Z4F1 713 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 JMJD8Q96S16 334 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 KRTAP4-12Q9BQ66 201 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 MCMBPQ9BTE3 642 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 KRTAP9-2Q9BYQ4 174 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 TANGO6Q9C0B7 1094 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 TNFRSF12AQ9NP84 129 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 PDLIM7Q9NR12 457 aa5.26□□□□□ -1.57
VRK1-202ENST00000553683 TEX51A0A1B0GUA7 166 aa5.25□□□□□ -1.57
VRK1-202ENST00000553683 IQCA1LA6NCM1 817 aa5.25□□□□□ -1.57
VRK1-202ENST00000553683 SRGAP3O43295 1099 aa5.25□□□□□ -1.57
VRK1-202ENST00000553683 VAMP4O75379 141 aa5.25□□□□□ -1.57
VRK1-202ENST00000553683 PRKCAP17252 672 aa5.25□□□□□ -1.57
VRK1-202ENST00000553683 E4F1Q66K89 784 aaPredicted RBP5.25□□□□□ -1.57
VRK1-202ENST00000553683 GTF2IRD2BQ6EKJ0 949 aa5.25□□□□□ -1.57
VRK1-202ENST00000553683 MRM1Q6IN84 353 aaKnown RBP5.25□□□□□ -1.57
VRK1-202ENST00000553683 GTF2IRD2Q86UP8 949 aa5.25□□□□□ -1.57
VRK1-202ENST00000553683 MICAL1Q8TDZ2 1067 aa5.25□□□□□ -1.57
VRK1-202ENST00000553683 HNRNPLLQ8WVV9 542 aaKnown RBP5.25□□□□□ -1.57
VRK1-202ENST00000553683 PLCD4Q9BRC7 762 aa5.25□□□□□ -1.57
VRK1-202ENST00000553683 MSRB2Q9Y3D2 182 aa5.25□□□□□ -1.57
VRK1-202ENST00000553683 NPHP3-ACAD11A0A0J9YXS1 232 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 A0A1W2PQ27 194 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 A0A1W2PQ64 194 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 A0A1W2PQC6 194 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 A0A1W2PQD8 194 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 STXBP3O00186 592 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 KCNH1O95259 989 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 EFEMP2O95967 443 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 ITGAVP06756 1048 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 PDE6BP35913 854 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 MVKQ03426 396 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 SLC10A6Q3KNW5 377 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 SV2CQ496J9 727 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 ACBD5Q5T8D3 534 aaPredicted RBP5.24□□□□□ -1.57
VRK1-202ENST00000553683 SYDE1Q6ZW31 735 aaPredicted RBP5.24□□□□□ -1.57
VRK1-202ENST00000553683 ZNF227Q86WZ6 799 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 NUP43Q8NFH3 380 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 DIRC2Q96SL1 478 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 TRIM55Q9BYV6 548 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 CCDC113Q9H0I3 377 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 SIRPGQ9P1W8 387 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 IMPACTQ9P2X3 320 aa5.24□□□□□ -1.57
VRK1-202ENST00000553683 NFIBO00712 420 aa5.23□□□□□ -1.57
VRK1-202ENST00000553683 U2SURPO15042 1029 aaKnown RBP5.23□□□□□ -1.57
VRK1-202ENST00000553683 CYBBP04839 570 aa5.23□□□□□ -1.57
VRK1-202ENST00000553683 TMEM253P0C7T8 217 aa5.23□□□□□ -1.57
VRK1-202ENST00000553683 DPY19L1Q2PZI1 675 aa5.23□□□□□ -1.57
VRK1-202ENST00000553683 ADGRF1Q5T601 910 aa5.23□□□□□ -1.57
VRK1-202ENST00000553683 ZNF648Q5T619 568 aaPredicted RBP5.23□□□□□ -1.57
VRK1-202ENST00000553683 PAQR3Q6TCH7 311 aa5.23□□□□□ -1.57
VRK1-202ENST00000553683 CELF2-AS1Q8N7Q2 184 aa5.23□□□□□ -1.57
VRK1-202ENST00000553683 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.23□□□□□ -1.57
VRK1-202ENST00000553683 LRP2BPQ9P2M1 347 aa5.23□□□□□ -1.57
VRK1-202ENST00000553683 DBX1A6NMT0 343 aa5.22□□□□□ -1.57
VRK1-202ENST00000553683 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.22□□□□□ -1.57
VRK1-202ENST00000553683 B2RBV5 119 aa5.22□□□□□ -1.57
VRK1-202ENST00000553683 NPHS1O60500 1241 aa5.22□□□□□ -1.57
VRK1-202ENST00000553683 RAP1GAPP47736 663 aa5.22□□□□□ -1.57
VRK1-202ENST00000553683 MAPKAPK2P49137 400 aa5.22□□□□□ -1.57
VRK1-202ENST00000553683 SCRN1Q12765 414 aa5.22□□□□□ -1.57
VRK1-202ENST00000553683 KRTAP19-4Q3LI73 84 aa5.22□□□□□ -1.57
VRK1-202ENST00000553683 KRTAP19-1Q8IUB9 90 aa5.22□□□□□ -1.57
VRK1-202ENST00000553683 NPLOC4Q8TAT6 608 aa5.22□□□□□ -1.57
VRK1-202ENST00000553683 KCNN1Q92952 543 aa5.22□□□□□ -1.57
VRK1-202ENST00000553683 MKL1Q969V6 931 aa5.22□□□□□ -1.57
VRK1-202ENST00000553683 MCOLN1Q9GZU1 580 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms