RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 TSPY2A6NKD2 308 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 CFAP99D6REC4 459 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 SPINT1O43278 529 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 ADCY5O95622 1261 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 BMP15O95972 392 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 ITGB2P05107 769 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 RXRBP28702 533 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 SSTR3P32745 418 aaPredicted RBP6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 KIF5BP33176 963 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 ZNF165P49910 485 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 NDUFA8P51970 172 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 TFAP4Q01664 338 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 GNL2Q13823 731 aaKnown RBP6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 STX1AQ16623 288 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 ANO6Q4KMQ2 910 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 MFSD14BQ5SR56 506 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 RESP18Q5W5W9 173 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 STYK1Q6J9G0 422 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 SARM1Q6SZW1 724 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 HHIPL2Q6UWX4 724 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 CKAP2LQ8IYA6 745 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 DIS3L2Q8IYB7 885 aaKnown RBP6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 ZNF444Q8N0Y2 327 aaPredicted RBP6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 NEDD1Q8NHV4 660 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 CTCFLQ8NI51 663 aaPredicted RBP6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 TGFBRAP1Q8WUH2 860 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 NUP133Q8WUM0 1156 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 TNFRSF25Q93038 417 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 BPIFA3Q9BQP9 254 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 LZTS2Q9BRK4 669 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 ZC3H12CQ9C0D7 883 aaKnown RBP6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 ANO10Q9NW15 660 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 CEP131Q9UPN4 1083 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 ZKSCAN5Q9Y2L8 839 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 PARP3Q9Y6F1 533 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 EP400Q96L91 3159 aa6.91□□□□□ -1.3
VIPAS39-204ENST00000553576 SCN9AQ15858 1988 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 PALM3A6NDB9 673 aaPredicted RBP6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 UBE2Q2LH0YL09 131 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 AP5Z1O43299 807 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 PRDM1O75626 825 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 CYP2D6P10635 497 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 RASA1P20936 1047 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 KRT2P35908 639 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 BTDP43251 543 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 TRAPPC10P48553 1259 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 CDK8P49336 464 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 PLCD1P51178 756 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 HDLBPQ00341 1268 aaKnown RBP6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 MAP3K10Q02779 954 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 GABPAQ06546 454 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 GRM4Q14833 912 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 DIXDC1Q155Q3 683 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 NPY5RQ15761 445 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 PFKFB3Q16875 520 aaPredicted RBP6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 FAM47AQ5JRC9 791 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 GALNT17Q6IS24 598 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 SHC4Q6S5L8 630 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 VASH1Q7L8A9 365 aaPredicted RBP6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 PODNQ7Z5L7 613 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 CCDC116Q8IYX3 515 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 SRBD1Q8N5C6 995 aaKnown RBP6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 ZC3H15Q8WU90 426 aaKnown RBP6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 SHISA4Q96DD7 197 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 EYA3Q99504 573 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 SDF4Q9BRK5 362 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 MKNK2Q9HBH9 465 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 TUBE1Q9UJT0 475 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 SRPRBQ9Y5M8 271 aaKnown RBP6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 MYO3BQ8WXR4 1341 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 CNTNAP5Q8WYK1 1306 aa6.9□□□□□ -1.3
VIPAS39-204ENST00000553576 C10orf71Q711Q0 1435 aa6.9□□□□□ -1.31
VIPAS39-204ENST00000553576 NMT2O60551 498 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 ZMYND10O75800 440 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 PLEKHA8P1O95397 391 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 PROCP04070 461 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 MMP10P09238 476 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 TSPY3P0CV98 308 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 TSPY8P0CW00 308 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 SCG2P13521 617 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 PFKFB1P16118 471 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 MSNP26038 577 aaKnown RBP6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 CALML3P27482 149 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 MARCKSP29966 332 aaPredicted RBP6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 CDC25BP30305 580 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 SYKP43405 635 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 NLRP12P59046 1061 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 GTF2IP78347 998 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 TPRNQ4KMQ1 711 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 CC2D2BQ6DHV5 1058 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 SH3RF1Q7Z6J0 888 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 SLC51AQ86UW1 340 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 PLA2G4DQ86XP0 818 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 TEX11Q8IYF3 940 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 TRMT44Q8IYL2 757 aaKnown RBP6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 STK11IPQ8N1F8 1099 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 CMTR1Q8N1G2 835 aaKnown RBP6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 DAGLBQ8NCG7 672 aa6.89□□□□□ -1.31
VIPAS39-204ENST00000553576 PNMA1Q8ND90 353 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms