RNA–Protein interactions for RNA: ENST00000553490.5

NPC2-204, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-204ENST00000553490 KRT40Q6A162 431 aa10.16□□□□□ -0.78
NPC2-204ENST00000553490 CTR9Q6PD62 1173 aa10.16□□□□□ -0.78
NPC2-204ENST00000553490 CLASRPQ8N2M8 674 aaKnown RBP10.16□□□□□ -0.78
NPC2-204ENST00000553490 ARNTL2Q8WYA1 636 aa10.16□□□□□ -0.78
NPC2-204ENST00000553490 SLC9A7Q96T83 725 aa10.16□□□□□ -0.78
NPC2-204ENST00000553490 SEZ6LQ9BYH1 1024 aa10.16□□□□□ -0.78
NPC2-204ENST00000553490 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.16□□□□□ -0.78
NPC2-204ENST00000553490 BCL11AQ9H165 835 aa10.16□□□□□ -0.78
NPC2-204ENST00000553490 ACAD9Q9H845 621 aa10.16□□□□□ -0.78
NPC2-204ENST00000553490 C11orf16Q9NQ32 467 aa10.16□□□□□ -0.78
NPC2-204ENST00000553490 PAG1Q9NWQ8 432 aa10.16□□□□□ -0.78
NPC2-204ENST00000553490 NYAP2Q9P242 653 aa10.16□□□□□ -0.78
NPC2-204ENST00000553490 GNEQ9Y223 722 aaKnown RBP10.16□□□□□ -0.78
NPC2-204ENST00000553490 SLC4A4Q9Y6R1 1079 aa10.16□□□□□ -0.78
NPC2-204ENST00000553490 BRWD1Q9NSI6 2320 aa10.15□□□□□ -0.78
NPC2-204ENST00000553490 TLL1O43897 1013 aa10.15□□□□□ -0.78
NPC2-204ENST00000553490 CHGBP05060 677 aa10.15□□□□□ -0.78
NPC2-204ENST00000553490 IFIT2P09913 472 aaKnown RBP10.15□□□□□ -0.78
NPC2-204ENST00000553490 ACTN1P12814 892 aa10.15□□□□□ -0.78
NPC2-204ENST00000553490 RASA1P20936 1047 aa10.15□□□□□ -0.78
NPC2-204ENST00000553490 DEFB128Q7Z7B8 93 aa10.15□□□□□ -0.78
NPC2-204ENST00000553490 FBXO16Q8IX29 292 aaPredicted RBP10.15□□□□□ -0.78
NPC2-204ENST00000553490 STK11IPQ8N1F8 1099 aa10.15□□□□□ -0.78
NPC2-204ENST00000553490 LRRC47Q8N1G4 583 aaKnown RBP10.15□□□□□ -0.78
NPC2-204ENST00000553490 FAM133AQ8N9E0 248 aa10.15□□□□□ -0.78
NPC2-204ENST00000553490 KHSRPQ92945 711 aaKnown RBP eCLIP10.15□□□□□ -0.78
NPC2-204ENST00000553490 HLA-CQ95604 372 aa10.15□□□□□ -0.78
NPC2-204ENST00000553490 VWCEQ96DN2 955 aa10.15□□□□□ -0.78
NPC2-204ENST00000553490 AGBL1Q96MI9 1066 aa10.15□□□□□ -0.78
NPC2-204ENST00000553490 ALDH8A1Q9H2A2 487 aaPredicted RBP10.15□□□□□ -0.78
NPC2-204ENST00000553490 A1CFQ9NQ94 594 aaKnown RBP10.15□□□□□ -0.78
NPC2-204ENST00000553490 RNF146Q9NTX7 359 aa10.15□□□□□ -0.78
NPC2-204ENST00000553490 FEM1BQ9UK73 627 aa10.15□□□□□ -0.78
NPC2-204ENST00000553490 ISY1Q9ULR0 285 aaKnown RBP10.15□□□□□ -0.78
NPC2-204ENST00000553490 TNKSO95271 1327 aa10.14□□□□□ -0.79
NPC2-204ENST00000553490 LCTP09848 1927 aa10.14□□□□□ -0.79
NPC2-204ENST00000553490 ASB14A6NK59 587 aa10.14□□□□□ -0.79
NPC2-204ENST00000553490 DYNC1LI2O43237 492 aaPredicted RBP10.14□□□□□ -0.79
NPC2-204ENST00000553490 GPR37L1O60883 481 aa10.14□□□□□ -0.79
NPC2-204ENST00000553490 ARHGEF15O94989 841 aa10.14□□□□□ -0.79
NPC2-204ENST00000553490 CYP2C9P11712 490 aa10.14□□□□□ -0.79
NPC2-204ENST00000553490 RLBP1P12271 317 aa10.14□□□□□ -0.79
NPC2-204ENST00000553490 SMPD1P17405 629 aa10.14□□□□□ -0.79
NPC2-204ENST00000553490 KIF1BPQ96EK5 621 aa10.14□□□□□ -0.79
NPC2-204ENST00000553490 BOLA2Q9H3K6 86 aa10.14□□□□□ -0.79
NPC2-204ENST00000553490 MKNK2Q9HBH9 465 aa10.14□□□□□ -0.79
NPC2-204ENST00000553490 TRMT13Q9NUP7 481 aaKnown RBP10.14□□□□□ -0.79
NPC2-204ENST00000553490 COG6Q9Y2V7 657 aa10.14□□□□□ -0.79
NPC2-204ENST00000553490 DDX49Q9Y6V7 483 aaKnown RBP10.14□□□□□ -0.79
NPC2-204ENST00000553490 PTPRSQ13332 1948 aa10.13□□□□□ -0.79
NPC2-204ENST00000553490 SOWAHBA6NEL2 793 aa10.13□□□□□ -0.79
NPC2-204ENST00000553490 SUPT20HL2P0C7V6 817 aa10.13□□□□□ -0.79
NPC2-204ENST00000553490 TAP1Q03518 808 aa10.13□□□□□ -0.79
NPC2-204ENST00000553490 GRB10Q13322 594 aa10.13□□□□□ -0.79
NPC2-204ENST00000553490 UBE3CQ15386 1083 aa10.13□□□□□ -0.79
NPC2-204ENST00000553490 EEPD1Q7L9B9 569 aa10.13□□□□□ -0.79
NPC2-204ENST00000553490 ALYREFQ86V81 257 aaKnown RBP10.13□□□□□ -0.79
NPC2-204ENST00000553490 HERC6Q8IVU3 1022 aa10.13□□□□□ -0.79
NPC2-204ENST00000553490 PDGFCQ9NRA1 345 aa10.13□□□□□ -0.79
NPC2-204ENST00000553490 CLIP2Q9UDT6 1046 aa10.13□□□□□ -0.79
NPC2-204ENST00000553490 IGKV6D-41A0A0C4DH26 115 aa10.12□□□□□ -0.79
NPC2-204ENST00000553490 FDX1P10109 184 aa10.12□□□□□ -0.79
NPC2-204ENST00000553490 BMP3P12645 472 aa10.12□□□□□ -0.79
NPC2-204ENST00000553490 RFC2P35250 354 aa10.12□□□□□ -0.79
NPC2-204ENST00000553490 STAT2P52630 851 aa10.12□□□□□ -0.79
NPC2-204ENST00000553490 IKQ13123 557 aaPredicted RBP10.12□□□□□ -0.79
NPC2-204ENST00000553490 FAM47CQ5HY64 1035 aa10.12□□□□□ -0.79
NPC2-204ENST00000553490 SPRED2Q7Z698 418 aa10.12□□□□□ -0.79
NPC2-204ENST00000553490 GMCL1P1Q8NEA9 526 aa10.12□□□□□ -0.79
NPC2-204ENST00000553490 PHOSPHO2Q8TCD6 241 aa10.12□□□□□ -0.79
NPC2-204ENST00000553490 GDPD5Q8WTR4 605 aa10.12□□□□□ -0.79
NPC2-204ENST00000553490 CEP95Q96GE4 821 aa10.12□□□□□ -0.79
NPC2-204ENST00000553490 PUS7LQ9H0K6 701 aaKnown RBP10.12□□□□□ -0.79
NPC2-204ENST00000553490 VTA1Q9NP79 307 aa10.12□□□□□ -0.79
NPC2-204ENST00000553490 POLR3EQ9NVU0 708 aa10.12□□□□□ -0.79
NPC2-204ENST00000553490 SYNPO2Q9UMS6 1093 aa10.12□□□□□ -0.79
NPC2-204ENST00000553490 PLIN4Q96Q06 1357 aa10.12□□□□□ -0.79
NPC2-204ENST00000553490 SCN10AQ9Y5Y9 1956 aa10.12□□□□□ -0.79
NPC2-204ENST00000553490 ZNF536O15090 1300 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 MINDY4BA8MYZ0 360 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 KIF28PB7ZC32 967 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 TMEM232C9JQI7 657 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 TTLL1O95922 423 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 MYL3P08590 195 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 ALAS1P13196 640 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 ATP5JP18859 108 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 TKFCQ3LXA3 575 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 SBK1Q52WX2 424 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 TMEM63BQ5T3F8 832 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 SLFN13Q68D06 897 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 IQSEC1Q6DN90 963 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 ZSCAN25Q6NSZ9 544 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 TAPT1Q6NXT6 567 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 RPAP2Q8IXW5 612 aaPredicted RBP10.11□□□□□ -0.79
NPC2-204ENST00000553490 TRERF1Q96PN7 1200 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 HAUS7Q99871 368 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 FTOQ9C0B1 505 aaKnown RBP eCLIP10.11□□□□□ -0.79
NPC2-204ENST00000553490 MTMR4Q9NYA4 1195 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 Q9Y3F1 56 aa10.11□□□□□ -0.79
NPC2-204ENST00000553490 PRR33A8MZF0 331 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms