RNA–Protein interactions for RNA: ENST00000553343.5

SDR39U1-204, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 681 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-204ENST00000553343 BARHL2Q9NY43 387 aa23.68■■□□□ 1.38
SDR39U1-204ENST00000553343 PCDHA1Q9Y5I3 950 aa23.68■■□□□ 1.38
SDR39U1-204ENST00000553343 BAZ2BQ9UIF8 2168 aaKnown RBP23.67■■□□□ 1.38
SDR39U1-204ENST00000553343 PTPDC1A2A3K4 754 aa23.67■■□□□ 1.38
SDR39U1-204ENST00000553343 FKTNO75072 461 aa23.67■■□□□ 1.38
SDR39U1-204ENST00000553343 LACTBP83111 547 aaPredicted RBP23.67■■□□□ 1.38
SDR39U1-204ENST00000553343 GHRHRQ02643 423 aa23.67■■□□□ 1.38
SDR39U1-204ENST00000553343 AGBL1Q96MI9 1066 aa23.67■■□□□ 1.38
SDR39U1-204ENST00000553343 MGAMO43451 1857 aa23.66■■□□□ 1.38
SDR39U1-204ENST00000553343 ESYT2A0FGR8 921 aa23.66■■□□□ 1.38
SDR39U1-204ENST00000553343 ERCC3P19447 782 aa23.66■■□□□ 1.38
SDR39U1-204ENST00000553343 FCGRTP55899 365 aa23.66■■□□□ 1.38
SDR39U1-204ENST00000553343 PKN1Q16512 942 aa23.66■■□□□ 1.38
SDR39U1-204ENST00000553343 TRERF1Q96PN7 1200 aa23.66■■□□□ 1.38
SDR39U1-204ENST00000553343 RNF146Q9NTX7 359 aa23.66■■□□□ 1.38
SDR39U1-204ENST00000553343 ORC3Q9UBD5 711 aaPredicted RBP23.66■■□□□ 1.38
SDR39U1-204ENST00000553343 PFASO15067 1338 aa23.65■■□□□ 1.38
SDR39U1-204ENST00000553343 PPP1R11O60927 126 aaPredicted RBP23.65■■□□□ 1.38
SDR39U1-204ENST00000553343 ALAS1P13196 640 aa23.65■■□□□ 1.38
SDR39U1-204ENST00000553343 NCAPG2Q86XI2 1143 aa23.65■■□□□ 1.38
SDR39U1-204ENST00000553343 SOCS4Q8WXH5 440 aa23.65■■□□□ 1.38
SDR39U1-204ENST00000553343 R3HDMLQ9H3Y0 253 aa23.65■■□□□ 1.38
SDR39U1-204ENST00000553343 IVNS1ABPQ9Y6Y0 642 aa23.65■■□□□ 1.38
SDR39U1-204ENST00000553343 GALNT17Q6IS24 598 aa23.64■■□□□ 1.37
SDR39U1-204ENST00000553343 CWC22Q9HCG8 908 aaKnown RBP23.64■■□□□ 1.37
SDR39U1-204ENST00000553343 PDIA4P13667 645 aaKnown RBP23.63■■□□□ 1.37
SDR39U1-204ENST00000553343 CTCFP49711 727 aaPredicted RBP23.63■■□□□ 1.37
SDR39U1-204ENST00000553343 PRMT2P55345 433 aa23.63■■□□□ 1.37
SDR39U1-204ENST00000553343 SNAP25P60880 206 aa23.63■■□□□ 1.37
SDR39U1-204ENST00000553343 USH1GQ495M9 461 aa23.63■■□□□ 1.37
SDR39U1-204ENST00000553343 WWC2Q6AWC2 1192 aa23.63■■□□□ 1.37
SDR39U1-204ENST00000553343 MCTP2Q6DN12 878 aa23.63■■□□□ 1.37
SDR39U1-204ENST00000553343 HEATR3Q7Z4Q2 680 aa23.63■■□□□ 1.37
SDR39U1-204ENST00000553343 GPR142Q7Z601 462 aa23.63■■□□□ 1.37
SDR39U1-204ENST00000553343 PLEKHH3Q7Z736 793 aa23.63■■□□□ 1.37
SDR39U1-204ENST00000553343 COA7Q96BR5 231 aa23.63■■□□□ 1.37
SDR39U1-204ENST00000553343 PORCNQ9H237 461 aa23.63■■□□□ 1.37
SDR39U1-204ENST00000553343 RIPK3Q9Y572 518 aa23.63■■□□□ 1.37
SDR39U1-204ENST00000553343 PLXNB2O15031 1838 aa23.63■■□□□ 1.37
SDR39U1-204ENST00000553343 SLC15A5A6NIM6 579 aa23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 STXBP3O00186 592 aa23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 HSPA1AP0DMV8 641 aaKnown RBP23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 HSPA1BP0DMV9 641 aaKnown RBP23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 FCER1AP12319 257 aa23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 FDPSP14324 419 aaKnown RBP23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 HOXD10P28358 340 aa23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 GNA11P29992 359 aa23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 ANP32AP39687 249 aaKnown RBP23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 NAPAP54920 295 aa23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 GRB14Q14449 540 aa23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 KCTD2Q14681 263 aa23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 FAM184AQ8NB25 1140 aa23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 ZNF296Q8WUU4 475 aaPredicted RBP23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 CLEC4DQ8WXI8 215 aa23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 ZMYND12Q9H0C1 365 aa23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 EFCC1Q9HA90 598 aa23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 SLC5A4Q9NY91 659 aa23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 SMC3Q9UQE7 1217 aa23.62■■□□□ 1.37
SDR39U1-204ENST00000553343 LOC102724159A0A0B4J2E5 919 aa23.61■■□□□ 1.37
SDR39U1-204ENST00000553343 PIK3CDO00329 1044 aa23.61■■□□□ 1.37
SDR39U1-204ENST00000553343 TNPO2O14787 897 aaKnown RBP23.61■■□□□ 1.37
SDR39U1-204ENST00000553343 PTPREP23469 700 aa23.61■■□□□ 1.37
SDR39U1-204ENST00000553343 PWP2Q15269 919 aaKnown RBP23.61■■□□□ 1.37
SDR39U1-204ENST00000553343 BICD2Q8TD16 824 aa23.61■■□□□ 1.37
SDR39U1-204ENST00000553343 PIBF1Q8WXW3 757 aa23.61■■□□□ 1.37
SDR39U1-204ENST00000553343 CASP8AP2Q9UKL3 1982 aa23.61■■□□□ 1.37
SDR39U1-204ENST00000553343 CALML3P27482 149 aa23.6■■□□□ 1.37
SDR39U1-204ENST00000553343 PSMC4P43686 418 aa23.6■■□□□ 1.37
SDR39U1-204ENST00000553343 MRPL12P52815 198 aaKnown RBP23.6■■□□□ 1.37
SDR39U1-204ENST00000553343 CUL5Q93034 780 aa23.6■■□□□ 1.37
SDR39U1-204ENST00000553343 MMP19Q99542 508 aa23.6■■□□□ 1.37
SDR39U1-204ENST00000553343 ALG1Q9BT22 464 aa23.6■■□□□ 1.37
SDR39U1-204ENST00000553343 C6orf50Q9HD87 102 aa23.6■■□□□ 1.37
SDR39U1-204ENST00000553343 DIS3Q9Y2L1 958 aaKnown RBP23.6■■□□□ 1.37
SDR39U1-204ENST00000553343 hCG_1642624A0A1W2PR95 340 aa23.59■■□□□ 1.37
SDR39U1-204ENST00000553343 JAK2O60674 1132 aa23.59■■□□□ 1.37
SDR39U1-204ENST00000553343 HSPA8P11142 646 aaKnown RBP23.59■■□□□ 1.37
SDR39U1-204ENST00000553343 HSD17B4P51659 736 aa23.59■■□□□ 1.37
SDR39U1-204ENST00000553343 ANKRD35Q8N283 1001 aa23.59■■□□□ 1.37
SDR39U1-204ENST00000553343 DAGLBQ8NCG7 672 aa23.59■■□□□ 1.37
SDR39U1-204ENST00000553343 GPKOWQ92917 476 aaPredicted RBP eCLIP23.59■■□□□ 1.37
SDR39U1-204ENST00000553343 RIC8AQ9NPQ8 531 aa23.59■■□□□ 1.37
SDR39U1-204ENST00000553343 A1CFQ9NQ94 594 aaKnown RBP23.59■■□□□ 1.37
SDR39U1-204ENST00000553343 HOMER2Q9NSB8 354 aa23.59■■□□□ 1.37
SDR39U1-204ENST00000553343 PEX10O60683 326 aa23.58■■□□□ 1.37
SDR39U1-204ENST00000553343 HSP90AA1P07900 732 aaKnown RBP23.58■■□□□ 1.37
SDR39U1-204ENST00000553343 HOXC6P09630 235 aa23.58■■□□□ 1.37
SDR39U1-204ENST00000553343 PDCP20941 246 aa23.58■■□□□ 1.37
SDR39U1-204ENST00000553343 TRIM29Q14134 588 aa23.58■■□□□ 1.37
SDR39U1-204ENST00000553343 MUM1L1Q5H9M0 696 aa23.58■■□□□ 1.37
SDR39U1-204ENST00000553343 MORN1Q5T089 497 aa23.58■■□□□ 1.37
SDR39U1-204ENST00000553343 WDR78Q5VTH9 848 aa23.58■■□□□ 1.37
SDR39U1-204ENST00000553343 RNF207Q6ZRF8 634 aa23.58■■□□□ 1.37
SDR39U1-204ENST00000553343 NUDT12Q9BQG2 462 aa23.58■■□□□ 1.37
SDR39U1-204ENST00000553343 PSTPIP2Q9H939 334 aa23.58■■□□□ 1.37
SDR39U1-204ENST00000553343 CYP39A1Q9NYL5 469 aa23.58■■□□□ 1.37
SDR39U1-204ENST00000553343 CEP350Q5VT06 3117 aa23.58■■□□□ 1.37
SDR39U1-204ENST00000553343 DNAJC25-GNG10A0A024R161 153 aa23.57■■□□□ 1.36
SDR39U1-204ENST00000553343 GCOM1H8Y6P7 765 aaPredicted RBP23.57■■□□□ 1.36
SDR39U1-204ENST00000553343 NFIBO00712 420 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms