RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 FSCN1Q16658 493 aaKnown RBP10.83□□□□□ -0.68
SYNE2-209ENST00000553308 TMEM63BQ5T3F8 832 aa10.83□□□□□ -0.68
SYNE2-209ENST00000553308 TSHZ3Q63HK5 1081 aa10.83□□□□□ -0.68
SYNE2-209ENST00000553308 SLFN13Q68D06 897 aa10.83□□□□□ -0.68
SYNE2-209ENST00000553308 ZNF444Q8N0Y2 327 aaPredicted RBP10.83□□□□□ -0.68
SYNE2-209ENST00000553308 MICALL1Q8N3F8 863 aa10.83□□□□□ -0.68
SYNE2-209ENST00000553308 KBTBD3Q8NAB2 608 aa10.83□□□□□ -0.68
SYNE2-209ENST00000553308 VWCEQ96DN2 955 aa10.83□□□□□ -0.68
SYNE2-209ENST00000553308 AGBL1Q96MI9 1066 aa10.83□□□□□ -0.68
SYNE2-209ENST00000553308 NECAB3Q96P71 396 aaPredicted RBP10.83□□□□□ -0.68
SYNE2-209ENST00000553308 LRRCC1Q9C099 1032 aa10.83□□□□□ -0.68
SYNE2-209ENST00000553308 TRPV6Q9H1D0 765 aa10.83□□□□□ -0.68
SYNE2-209ENST00000553308 PDGFCQ9NRA1 345 aa10.83□□□□□ -0.68
SYNE2-209ENST00000553308 SYNPO2Q9UMS6 1093 aa10.83□□□□□ -0.68
SYNE2-209ENST00000553308 LCTP09848 1927 aa10.82□□□□□ -0.68
SYNE2-209ENST00000553308 DYNC1LI2O43237 492 aaPredicted RBP10.82□□□□□ -0.68
SYNE2-209ENST00000553308 CABYRO75952 493 aa10.82□□□□□ -0.68
SYNE2-209ENST00000553308 STAT2P52630 851 aa10.82□□□□□ -0.68
SYNE2-209ENST00000553308 SNAP25P60880 206 aa10.82□□□□□ -0.68
SYNE2-209ENST00000553308 PPP2R2DQ66LE6 453 aa10.82□□□□□ -0.68
SYNE2-209ENST00000553308 EEPD1Q7L9B9 569 aa10.82□□□□□ -0.68
SYNE2-209ENST00000553308 FBXO16Q8IX29 292 aaPredicted RBP10.82□□□□□ -0.68
SYNE2-209ENST00000553308 IL27Q8NEV9 243 aa10.82□□□□□ -0.68
SYNE2-209ENST00000553308 SCLYQ96I15 445 aa10.82□□□□□ -0.68
SYNE2-209ENST00000553308 AP5M1Q9H0R1 490 aa10.82□□□□□ -0.68
SYNE2-209ENST00000553308 ECHDC1Q9NTX5 307 aa10.82□□□□□ -0.68
SYNE2-209ENST00000553308 MYO9BQ13459 2157 aa10.82□□□□□ -0.68
SYNE2-209ENST00000553308 ASB14A6NK59 587 aa10.81□□□□□ -0.68
SYNE2-209ENST00000553308 ZBBXA8MT70 800 aa10.81□□□□□ -0.68
SYNE2-209ENST00000553308 RNF113AO15541 343 aaKnown RBP10.81□□□□□ -0.68
SYNE2-209ENST00000553308 APPP05067 770 aa10.81□□□□□ -0.68
SYNE2-209ENST00000553308 TSPY3P0CV98 308 aa10.81□□□□□ -0.68
SYNE2-209ENST00000553308 TSPY8P0CW00 308 aa10.81□□□□□ -0.68
SYNE2-209ENST00000553308 FDX1P10109 184 aa10.81□□□□□ -0.68
SYNE2-209ENST00000553308 ALAS1P13196 640 aa10.81□□□□□ -0.68
SYNE2-209ENST00000553308 TFF2Q03403 129 aa10.81□□□□□ -0.68
SYNE2-209ENST00000553308 IKQ13123 557 aaPredicted RBP10.81□□□□□ -0.68
SYNE2-209ENST00000553308 MUM1L1Q5H9M0 696 aa10.81□□□□□ -0.68
SYNE2-209ENST00000553308 TAPT1Q6NXT6 567 aa10.81□□□□□ -0.68
SYNE2-209ENST00000553308 RASGRP2Q7LDG7 609 aa10.81□□□□□ -0.68
SYNE2-209ENST00000553308 FAM160B2Q86V87 743 aa10.81□□□□□ -0.68
SYNE2-209ENST00000553308 NEDD1Q8NHV4 660 aa10.81□□□□□ -0.68
SYNE2-209ENST00000553308 TRERF1Q96PN7 1200 aa10.81□□□□□ -0.68
SYNE2-209ENST00000553308 PURBQ96QR8 312 aaKnown RBP10.81□□□□□ -0.68
SYNE2-209ENST00000553308 ZNF287Q9HBT7 754 aa10.81□□□□□ -0.68
SYNE2-209ENST00000553308 SLC4A7Q9Y6M7 1214 aa10.81□□□□□ -0.68
SYNE2-209ENST00000553308 TCF20Q9UGU0 1960 aaKnown RBP10.8□□□□□ -0.68
SYNE2-209ENST00000553308 ZEB2O60315 1214 aa10.8□□□□□ -0.68
SYNE2-209ENST00000553308 ATP2A2P16615 1042 aaKnown RBP10.8□□□□□ -0.68
SYNE2-209ENST00000553308 GNAT2P19087 354 aa10.8□□□□□ -0.68
SYNE2-209ENST00000553308 MCCP23508 829 aa10.8□□□□□ -0.68
SYNE2-209ENST00000553308 SLC1A4P43007 532 aa10.8□□□□□ -0.68
SYNE2-209ENST00000553308 TFAP4Q01664 338 aa10.8□□□□□ -0.68
SYNE2-209ENST00000553308 TTLL4Q14679 1199 aa10.8□□□□□ -0.68
SYNE2-209ENST00000553308 TKFCQ3LXA3 575 aa10.8□□□□□ -0.68
SYNE2-209ENST00000553308 KCTD1Q719H9 257 aa10.8□□□□□ -0.68
SYNE2-209ENST00000553308 IFNL3Q8IZI9 196 aa10.8□□□□□ -0.68
SYNE2-209ENST00000553308 CHURC1Q8WUH1 139 aa10.8□□□□□ -0.68
SYNE2-209ENST00000553308 STAG1Q8WVM7 1258 aa10.8□□□□□ -0.68
SYNE2-209ENST00000553308 GMCL1Q96IK5 515 aa10.8□□□□□ -0.68
SYNE2-209ENST00000553308 SEC62Q99442 399 aaKnown RBP10.8□□□□□ -0.68
SYNE2-209ENST00000553308 ALDH8A1Q9H2A2 487 aaPredicted RBP10.8□□□□□ -0.68
SYNE2-209ENST00000553308 CYP39A1Q9NYL5 469 aa10.8□□□□□ -0.68
SYNE2-209ENST00000553308 PCDHA11Q9Y5I1 949 aa10.8□□□□□ -0.68
SYNE2-209ENST00000553308 CHD9Q3L8U1 2897 aa10.8□□□□□ -0.68
SYNE2-209ENST00000553308 MUC3AQ02505 3323 aa10.79□□□□□ -0.68
SYNE2-209ENST00000553308 PATL2C9JE40 543 aaKnown RBP10.79□□□□□ -0.68
SYNE2-209ENST00000553308 RFXAPO00287 272 aa10.79□□□□□ -0.68
SYNE2-209ENST00000553308 ZFYP08048 801 aaPredicted RBP10.79□□□□□ -0.68
SYNE2-209ENST00000553308 CYP2C9P11712 490 aa10.79□□□□□ -0.68
SYNE2-209ENST00000553308 BMP1P13497 986 aa10.79□□□□□ -0.68
SYNE2-209ENST00000553308 PLA2G5P39877 138 aa10.79□□□□□ -0.68
SYNE2-209ENST00000553308 KCNQ1P51787 676 aa10.79□□□□□ -0.68
SYNE2-209ENST00000553308 PDE4BQ07343 736 aa10.79□□□□□ -0.68
SYNE2-209ENST00000553308 IQSEC1Q6DN90 963 aa10.79□□□□□ -0.68
SYNE2-209ENST00000553308 NSMFQ6X4W1 530 aa10.79□□□□□ -0.68
SYNE2-209ENST00000553308 DEFB128Q7Z7B8 93 aa10.79□□□□□ -0.68
SYNE2-209ENST00000553308 RPUSD2Q8IZ73 545 aaKnown RBP10.79□□□□□ -0.68
SYNE2-209ENST00000553308 SEZ6LQ9BYH1 1024 aa10.79□□□□□ -0.68
SYNE2-209ENST00000553308 TSPYL2Q9H2G4 693 aaPredicted RBP10.79□□□□□ -0.68
SYNE2-209ENST00000553308 TRMT13Q9NUP7 481 aaKnown RBP10.79□□□□□ -0.68
SYNE2-209ENST00000553308 PRR12Q9ULL5 1215 aa10.79□□□□□ -0.68
SYNE2-209ENST00000553308 Q9Y3F1 56 aa10.79□□□□□ -0.68
SYNE2-209ENST00000553308 SCN5AQ14524 2016 aa10.79□□□□□ -0.68
SYNE2-209ENST00000553308 EPOPA6NHQ4 379 aa10.78□□□□□ -0.68
SYNE2-209ENST00000553308 NMT2O60551 498 aa10.78□□□□□ -0.68
SYNE2-209ENST00000553308 CA3P07451 260 aa10.78□□□□□ -0.68
SYNE2-209ENST00000553308 PPARAQ07869 468 aa10.78□□□□□ -0.68
SYNE2-209ENST00000553308 SKIV2LQ15477 1246 aaKnown RBP10.78□□□□□ -0.68
SYNE2-209ENST00000553308 C20orf194Q5TEA3 1177 aa10.78□□□□□ -0.68
SYNE2-209ENST00000553308 KIAA1211Q6ZU35 1233 aa10.78□□□□□ -0.68
SYNE2-209ENST00000553308 MORC4Q8TE76 937 aa10.78□□□□□ -0.68
SYNE2-209ENST00000553308 PPP1R13LQ8WUF5 828 aa10.78□□□□□ -0.68
SYNE2-209ENST00000553308 GPATCH3Q96I76 525 aa10.78□□□□□ -0.68
SYNE2-209ENST00000553308 NAPBQ9H115 298 aa10.78□□□□□ -0.68
SYNE2-209ENST00000553308 CHMP4BQ9H444 224 aaKnown RBP10.78□□□□□ -0.68
SYNE2-209ENST00000553308 CERS4Q9HA82 394 aa10.78□□□□□ -0.68
SYNE2-209ENST00000553308 VTA1Q9NP79 307 aa10.78□□□□□ -0.68
SYNE2-209ENST00000553308 CCPG1Q9ULG6 757 aa10.78□□□□□ -0.68
SYNE2-209ENST00000553308 MTMR7Q9Y216 660 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms