RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 ITGB4P16144 1822 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 ACACBO00763 2458 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 CFAP47Q6ZTR5 3102 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 TTC21BQ7Z4L5 1316 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 MYH14Q7Z406 1995 aaKnown RBP5.55□□□□□ -1.52
PFDN5-219ENST00000553171 MON2Q7Z3U7 1717 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 PRRT4C9JH25 899 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 GOLGA6L19H0YKK7 550 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 AKR1B10O60218 316 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 ZBED4O75132 1171 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 REC8O95072 547 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 ALDH1A1P00352 501 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 MYL1P05976 194 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 SLFN14P0C7P3 912 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 FOSL2P15408 326 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 ATF7P17544 494 aaPredicted RBP5.55□□□□□ -1.52
PFDN5-219ENST00000553171 CYP11B2P19099 503 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 CDC27P30260 824 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 USP11P51784 963 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 MNAT1P51948 309 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 MRPS5P82675 430 aaKnown RBP5.55□□□□□ -1.52
PFDN5-219ENST00000553171 CAP1Q01518 475 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 GOLGA2Q08379 1002 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 Q3C1V9 767 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 TTC31Q49AM3 519 aaPredicted RBP5.55□□□□□ -1.52
PFDN5-219ENST00000553171 USPL1Q5W0Q7 1092 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 BEND5Q7L4P6 421 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 RSPH3Q86UC2 560 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 ERC1Q8IUD2 1116 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 WDR75Q8IWA0 830 aaKnown RBP5.55□□□□□ -1.52
PFDN5-219ENST00000553171 ARL10Q8N8L6 244 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 ATP11CQ8NB49 1132 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 ANKK1Q8NFD2 765 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 SUN5Q8TC36 379 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 CD99L2Q8TCZ2 262 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 BICD2Q8TD16 824 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 BRSK1Q8TDC3 778 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 LRRC45Q96CN5 670 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 IER2Q9BTL4 223 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 CAPS2Q9BXY5 557 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.55□□□□□ -1.52
PFDN5-219ENST00000553171 DNAJC25Q9H1X3 360 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 CCDC68Q9H2F9 335 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 RABEP2Q9H5N1 569 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 NRDE2Q9H7Z3 1164 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 ARNT2Q9HBZ2 717 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 KRT82Q9NSB4 513 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 ATG3Q9NT62 314 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 PSD3Q9NYI0 1048 aa5.55□□□□□ -1.52
PFDN5-219ENST00000553171 NOSIPQ9Y314 301 aaKnown RBP5.55□□□□□ -1.52
PFDN5-219ENST00000553171 MRPS23Q9Y3D9 190 aaKnown RBP5.55□□□□□ -1.52
PFDN5-219ENST00000553171 NAV2Q8IVL1 2488 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 PCDH11XQ9BZA7 1347 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 PCDH11YQ9BZA8 1340 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 CACNA1SQ13698 1873 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 LINC00854A0A1B0GVQ3 168 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 SPDYE5A6NIY4 337 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 C2orf81A6NN90 581 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 PRSS47A8MTI9 375 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 CYP27B1O15528 508 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 KDM1AO60341 852 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 ZPR1O75312 459 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 B3GALNT1O75752 331 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 MYCP01106 439 aaPredicted RBP5.54□□□□□ -1.52
PFDN5-219ENST00000553171 SRGNP10124 158 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 XRCC6P12956 609 aaKnown RBP eCLIP5.54□□□□□ -1.52
PFDN5-219ENST00000553171 MSNP26038 577 aaKnown RBP5.54□□□□□ -1.52
PFDN5-219ENST00000553171 HSPA4P34932 840 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 NOS2P35228 1153 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 MATR3P43243 847 aaKnown RBP eCLIP5.54□□□□□ -1.52
PFDN5-219ENST00000553171 MAGEA10P43363 369 aaPredicted RBP5.54□□□□□ -1.52
PFDN5-219ENST00000553171 COPAP53621 1224 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 AMPD3Q01432 767 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 RBL2Q08999 1139 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 GRIK3Q13003 919 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 STK3Q13188 491 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 KIF22Q14807 665 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 SUZ12Q15022 739 aaKnown RBP5.54□□□□□ -1.52
PFDN5-219ENST00000553171 RASA2Q15283 850 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 E2F4Q16254 413 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 RABL6Q3YEC7 729 aaPredicted RBP5.54□□□□□ -1.52
PFDN5-219ENST00000553171 WDR45BQ5MNZ6 344 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 HYIQ5T013 277 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 KIAA1614Q5VZ46 1190 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 ISM2Q6H9L7 571 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 CCDC186Q7Z3E2 898 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 SRLQ86TD4 932 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 TMEM110Q86TL2 294 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 ARMC2Q8NEN0 867 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 PPHLN1Q8NEY8 458 aaKnown RBP5.54□□□□□ -1.52
PFDN5-219ENST00000553171 RASSF8Q8NHQ8 419 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 TCP11Q8WWU5 503 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 ZNF75CPQ92670 426 aaPredicted RBP5.54□□□□□ -1.52
PFDN5-219ENST00000553171 RNF25Q96BH1 459 aaPredicted RBP5.54□□□□□ -1.52
PFDN5-219ENST00000553171 PGBD4Q96DM1 585 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 THOC1Q96FV9 657 aaKnown RBP5.54□□□□□ -1.52
PFDN5-219ENST00000553171 PRIMPOLQ96LW4 560 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 FBXL18Q96ME1 805 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 SERINC2Q96SA4 455 aa5.54□□□□□ -1.52
PFDN5-219ENST00000553171 TINF2Q9BSI4 451 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms