RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 TTBK2Q6IQ55 1244 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 CCDC174Q6PII3 467 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 Q6ZUG5 572 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 MICU3Q86XE3 530 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 CUL5Q93034 780 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 MTMR8Q96EF0 704 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 UBA5Q9GZZ9 404 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 EHMT1Q9H9B1 1298 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 JMJD4Q9H9V9 463 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 PCDHA1Q9Y5I3 950 aa11.88□□□□□ -0.51
TRAFD1-208ENST00000552890 ST18O60284 1047 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 GJB1P08034 283 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 GOLGA8HP0CJ92 632 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 XBP1P17861 261 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 MCM2P49736 904 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 QRICH1Q2TAL8 776 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 PPP1R18Q6NYC8 613 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 MAMDC4Q6UXC1 1216 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 RNF207Q6ZRF8 634 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 BRF1Q92994 677 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 AGBL1Q96MI9 1066 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 C22orf23Q9BZE7 217 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 ABHD16BQ9H3Z7 469 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 VAT1LQ9HCJ6 419 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 GABRQQ9UN88 632 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 TAF6LQ9Y6J9 622 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 PARP14Q460N5 1801 aa11.87□□□□□ -0.51
TRAFD1-208ENST00000552890 ZNF536O15090 1300 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 DNAJC25-GNG10A0A024R161 153 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 PTPDC1A2A3K4 754 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 CCDC85CA6NKD9 419 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 INHAP05111 366 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 CTGFP29279 349 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 ZNF792Q3KQV3 632 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 C8orf34Q49A92 452 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 NSMFQ6X4W1 530 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 TMTC3Q6ZXV5 915 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 ANKLE1Q8NAG6 615 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 BICD2Q8TD16 824 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 MAML3Q96JK9 1138 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 IWS1Q96ST2 819 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 TINF2Q9BSI4 451 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 RNF208Q9H0X6 261 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 SPC25Q9HBM1 224 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 HOMER2Q9NSB8 354 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 CYP39A1Q9NYL5 469 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 NID2Q14112 1375 aa11.86□□□□□ -0.51
TRAFD1-208ENST00000552890 GCOM1H8Y6P7 765 aaPredicted RBP11.85□□□□□ -0.51
TRAFD1-208ENST00000552890 POLR2MP0CAP2 368 aa11.85□□□□□ -0.51
TRAFD1-208ENST00000552890 RBM25P49756 843 aaKnown RBP11.85□□□□□ -0.51
TRAFD1-208ENST00000552890 RABEP1Q15276 862 aa11.85□□□□□ -0.51
TRAFD1-208ENST00000552890 XRRA1Q6P2D8 792 aa11.85□□□□□ -0.51
TRAFD1-208ENST00000552890 POTEEQ6S8J3 1075 aa11.85□□□□□ -0.51
TRAFD1-208ENST00000552890 HOMER1Q86YM7 354 aa11.85□□□□□ -0.51
TRAFD1-208ENST00000552890 STAG2Q8N3U4 1231 aa11.85□□□□□ -0.51
TRAFD1-208ENST00000552890 ARRDC4Q8NCT1 418 aa11.85□□□□□ -0.51
TRAFD1-208ENST00000552890 NSUN6Q8TEA1 469 aaKnown RBP11.85□□□□□ -0.51
TRAFD1-208ENST00000552890 WASF1Q92558 559 aa11.85□□□□□ -0.51
TRAFD1-208ENST00000552890 ZSCAN31Q96LW9 406 aaPredicted RBP11.85□□□□□ -0.51
TRAFD1-208ENST00000552890 RNF26Q9BY78 433 aaPredicted RBP11.85□□□□□ -0.51
TRAFD1-208ENST00000552890 LRRC2Q9BYS8 371 aa11.85□□□□□ -0.51
TRAFD1-208ENST00000552890 A1CFQ9NQ94 594 aaKnown RBP11.85□□□□□ -0.51
TRAFD1-208ENST00000552890 DOCK3Q8IZD9 2030 aa11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 STAM2O75886 525 aa11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 FOSP01100 380 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 CCL5P13501 91 aa11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 PRKAR2AP13861 404 aaKnown RBP11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 IFNAR1P17181 557 aa11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 GNA11P29992 359 aa11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 NEK4P51957 841 aa11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 GHRHRQ02643 423 aa11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 USH1GQ495M9 461 aa11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 BRDTQ58F21 947 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 MAP3K21Q5TCX8 1036 aa11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 KCNV1Q6PIU1 500 aa11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 FAM133AQ8N9E0 248 aa11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 CCDC148Q8NFR7 591 aa11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 SLKQ9H2G2 1235 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 VTA1Q9NP79 307 aa11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 SH2B1Q9NRF2 756 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 KIF3AQ9Y496 699 aa11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 RIPK3Q9Y572 518 aa11.84□□□□□ -0.51
TRAFD1-208ENST00000552890 COL11A1P12107 1806 aaPredicted RBP11.83□□□□□ -0.51
TRAFD1-208ENST00000552890 PIK3CDO00329 1044 aa11.83□□□□□ -0.52
TRAFD1-208ENST00000552890 SEPT4O43236 478 aa11.83□□□□□ -0.52
TRAFD1-208ENST00000552890 ELNP15502 786 aa11.83□□□□□ -0.52
TRAFD1-208ENST00000552890 PDIA3P30101 505 aaKnown RBP11.83□□□□□ -0.52
TRAFD1-208ENST00000552890 GJA8P48165 433 aa11.83□□□□□ -0.52
TRAFD1-208ENST00000552890 SSRP1Q08945 709 aaKnown RBP11.83□□□□□ -0.52
TRAFD1-208ENST00000552890 APOBRQ0VD83 1088 aa11.83□□□□□ -0.52
TRAFD1-208ENST00000552890 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-208ENST00000552890 GALNT17Q6IS24 598 aa11.83□□□□□ -0.52
TRAFD1-208ENST00000552890 SH3TC2Q8TF17 1288 aa11.83□□□□□ -0.52
TRAFD1-208ENST00000552890 TRIB2Q92519 343 aa11.83□□□□□ -0.52
TRAFD1-208ENST00000552890 PIGSQ96S52 555 aa11.83□□□□□ -0.52
TRAFD1-208ENST00000552890 UPF3BQ9BZI7 483 aaKnown RBP11.83□□□□□ -0.52
TRAFD1-208ENST00000552890 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRAFD1-208ENST00000552890 PAK6Q9NQU5 681 aaPredicted RBP11.83□□□□□ -0.52
TRAFD1-208ENST00000552890 SH3GLB2Q9NR46 395 aa11.83□□□□□ -0.52
TRAFD1-208ENST00000552890 FAM184BQ9ULE4 1060 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms