RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 PCDHB6Q9Y5E3 794 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 PCDHA8Q9Y5H6 950 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 SRCAPQ6ZRS2 3230 aa12.89□□□□□ -0.35
CACNB3-224ENST00000552812 POLR2AP24928 1970 aaKnown RBP12.88□□□□□ -0.35
CACNB3-224ENST00000552812 CMA1P23946 247 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 EPHX2P34913 555 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 ADCY7P51828 1080 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 IKQ13123 557 aaPredicted RBP12.88□□□□□ -0.35
CACNB3-224ENST00000552812 KIAA1755Q5JYT7 1200 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 TTC38Q5R3I4 469 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 NOL9Q5SY16 702 aaKnown RBP12.88□□□□□ -0.35
CACNB3-224ENST00000552812 CCDC73Q6ZRK6 1079 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 TEX2Q8IWB9 1127 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 REXO1Q8N1G1 1221 aaKnown RBP12.88□□□□□ -0.35
CACNB3-224ENST00000552812 WDR18Q9BV38 432 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 GLIS2Q9BZE0 524 aaPredicted RBP12.88□□□□□ -0.35
CACNB3-224ENST00000552812 AS3MTQ9HBK9 375 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 WDR46O15213 610 aaKnown RBP12.88□□□□□ -0.35
CACNB3-224ENST00000552812 CUTAO60888 179 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 MARCKSP29966 332 aaPredicted RBP12.88□□□□□ -0.35
CACNB3-224ENST00000552812 USP14P54578 494 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 FAM160A1Q05DH4 1040 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 TPRNQ4KMQ1 711 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 FAM83BQ5T0W9 1011 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 PRAMEF18Q5VWM3 479 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 KRI1Q8N9T8 703 aaKnown RBP12.88□□□□□ -0.35
CACNB3-224ENST00000552812 COA7Q96BR5 231 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 AMNQ9BXJ7 453 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 RIC8AQ9NPQ8 531 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 PICK1Q9NRD5 415 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 DACT1Q9NYF0 836 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 FEM1BQ9UK73 627 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 PRR12Q9ULL5 1215 aa12.88□□□□□ -0.35
CACNB3-224ENST00000552812 WDR90Q96KV7 1748 aa12.87□□□□□ -0.35
CACNB3-224ENST00000552812 ADAMTS3O15072 1205 aa12.87□□□□□ -0.35
CACNB3-224ENST00000552812 NR1I2O75469 434 aa12.87□□□□□ -0.35
CACNB3-224ENST00000552812 PTPRAP18433 802 aa12.87□□□□□ -0.35
CACNB3-224ENST00000552812 PTPREP23469 700 aa12.87□□□□□ -0.35
CACNB3-224ENST00000552812 MRPL12P52815 198 aaKnown RBP12.87□□□□□ -0.35
CACNB3-224ENST00000552812 NONOQ15233 471 aaKnown RBP eCLIP12.87□□□□□ -0.35
CACNB3-224ENST00000552812 NOM1Q5C9Z4 860 aaKnown RBP12.87□□□□□ -0.35
CACNB3-224ENST00000552812 KRT26Q7Z3Y9 468 aa12.87□□□□□ -0.35
CACNB3-224ENST00000552812 FSIP1Q8NA03 581 aa12.87□□□□□ -0.35
CACNB3-224ENST00000552812 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.87□□□□□ -0.35
CACNB3-224ENST00000552812 RASGRP4Q8TDF6 673 aa12.87□□□□□ -0.35
CACNB3-224ENST00000552812 CUL5Q93034 780 aa12.87□□□□□ -0.35
CACNB3-224ENST00000552812 NUP62CLQ9H1M0 184 aa12.87□□□□□ -0.35
CACNB3-224ENST00000552812 PCDHA1Q9Y5I3 950 aa12.87□□□□□ -0.35
CACNB3-224ENST00000552812 FAM237AA0A1B0GTK4 181 aa12.86□□□□□ -0.35
CACNB3-224ENST00000552812 SYCE3A1L190 88 aa12.86□□□□□ -0.35
CACNB3-224ENST00000552812 FSD2A1L4K1 749 aa12.86□□□□□ -0.35
CACNB3-224ENST00000552812 ATP2B1P20020 1258 aa12.86□□□□□ -0.35
CACNB3-224ENST00000552812 ORC2Q13416 577 aaPredicted RBP12.86□□□□□ -0.35
CACNB3-224ENST00000552812 ZYXQ15942 572 aaKnown RBP12.86□□□□□ -0.35
CACNB3-224ENST00000552812 CCDC84Q86UT8 332 aaPredicted RBP12.86□□□□□ -0.35
CACNB3-224ENST00000552812 PNMA8AQ86V59 439 aaPredicted RBP12.86□□□□□ -0.35
CACNB3-224ENST00000552812 FBXO11Q86XK2 927 aa12.86□□□□□ -0.35
CACNB3-224ENST00000552812 ENGASEQ8NFI3 743 aa12.86□□□□□ -0.35
CACNB3-224ENST00000552812 FERMT2Q96AC1 680 aa12.86□□□□□ -0.35
CACNB3-224ENST00000552812 GOLPH3LQ9H4A5 285 aa12.86□□□□□ -0.35
CACNB3-224ENST00000552812 FBXO2Q9UK22 296 aaPredicted RBP12.86□□□□□ -0.35
CACNB3-224ENST00000552812 SRPRBQ9Y5M8 271 aaKnown RBP12.86□□□□□ -0.35
CACNB3-224ENST00000552812 PAPPA2Q9BXP8 1791 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 PPP1R12BO60237 982 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-224ENST00000552812 CLK2P49760 499 aaKnown RBP12.85□□□□□ -0.35
CACNB3-224ENST00000552812 ATP2C1P98194 919 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-224ENST00000552812 SNW1Q13573 536 aaKnown RBP12.85□□□□□ -0.35
CACNB3-224ENST00000552812 MCTP2Q6DN12 878 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 LRSAM1Q6UWE0 723 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 ZNF280CQ8ND82 737 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 ZKSCAN4Q969J2 545 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-224ENST00000552812 RANBP17Q9H2T7 1088 aaKnown RBP12.85□□□□□ -0.35
CACNB3-224ENST00000552812 CLSTN2Q9H4D0 955 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 TAF1DQ9H5J8 278 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-224ENST00000552812 PSTPIP2Q9H939 334 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 GOLGA6L3A6NEY3 463 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 C19orf81C9J6K1 198 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 ADM5C9JUS6 153 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 LAD1O00515 517 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 WNT7AO00755 349 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 CTAGE5O15320 804 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 KINO60870 393 aaKnown RBP12.85□□□□□ -0.35
CACNB3-224ENST00000552812 USP2O75604 605 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-224ENST00000552812 NF2P35240 595 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 BACE1P56817 501 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 MTMR2Q13614 643 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 INF2Q27J81 1249 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 RESP18Q5W5W9 173 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 ARL6IP4Q66PJ3 421 aaKnown RBP12.85□□□□□ -0.35
CACNB3-224ENST00000552812 SHC4Q6S5L8 630 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 NEK8Q86SG6 692 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 FMR1NBQ8N0W7 255 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-224ENST00000552812 C12orf42Q96LP6 360 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 TNMDQ9H2S6 317 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 HPSEQ9Y251 543 aa12.85□□□□□ -0.35
CACNB3-224ENST00000552812 PHIPQ8WWQ0 1821 aa12.84□□□□□ -0.35
CACNB3-224ENST00000552812 NDUFA8P51970 172 aa12.84□□□□□ -0.35
CACNB3-224ENST00000552812 SPP2Q13103 211 aa12.84□□□□□ -0.35
CACNB3-224ENST00000552812 PTGDRQ13258 359 aa12.84□□□□□ -0.35
CACNB3-224ENST00000552812 ZNF174Q15697 407 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms