RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, human

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM116-216	ENST00000552800	KANK3	Q6NY19	840 aa		11.22	□□□□□ -0.61
TMEM116-216	ENST00000552800	ADGRF4	Q8IZF3	695 aa		11.22	□□□□□ -0.61
TMEM116-216	ENST00000552800	FSIP1	Q8NA03	581 aa		11.22	□□□□□ -0.61
TMEM116-216	ENST00000552800	ZDHHC16	Q969W1	377 aa		11.22	□□□□□ -0.61
TMEM116-216	ENST00000552800	HOOK2	Q96ED9	719 aa		11.22	□□□□□ -0.61
TMEM116-216	ENST00000552800	BPIFA3	Q9BQP9	254 aa		11.22	□□□□□ -0.61
TMEM116-216	ENST00000552800	PITPNM2	Q9BZ72	1349 aa		11.22	□□□□□ -0.61
TMEM116-216	ENST00000552800	RIC8A	Q9NPQ8	531 aa		11.22	□□□□□ -0.61
TMEM116-216	ENST00000552800	KIAA1468	Q9P260	1216 aa		11.22	□□□□□ -0.61
TMEM116-216	ENST00000552800	CNOT7	Q9UIV1	285 aa	Known RBP	11.22	□□□□□ -0.61
TMEM116-216	ENST00000552800		A0A1W2PRG0	241 aa		11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	SMCO2	A6NFE2	343 aa		11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	EDIL3	O43854	480 aa		11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	CTNND1	O60716	968 aa	Known RBP	11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	KIN	O60870	393 aa	Known RBP	11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	SARS	P49591	514 aa	Known RBP	11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	ICA1	Q05084	483 aa		11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	TTC38	Q5R3I4	469 aa		11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	PPP4R3A	Q6IN85	833 aa		11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	MOXD1	Q6UVY6	613 aa		11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	SH3RF1	Q7Z6J0	888 aa		11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	SAMD3	Q8N6K7	520 aa		11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	NLGN2	Q8NFZ4	835 aa		11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	PIGS	Q96S52	555 aa		11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	TRIM34	Q9BYJ4	488 aa		11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800	SEC63	Q9UGP8	760 aa	Known RBP	11.21	□□□□□ -0.61
TMEM116-216	ENST00000552800		A0A1B0GVL5	298 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	hCG_1642624	A0A1W2PR95	340 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	TCP10L2	B9ZVM9	353 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	PIK3CD	O00329	1044 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	SLC26A4	O43511	780 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	GH2	P01242	217 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	GOLGA8H	P0CJ92	632 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	PFKFB1	P16118	471 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	LONP1	P36776	959 aa	Known RBP	11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	SLC1A4	P43007	532 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	SYK	P43405	635 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	GMPS	P49915	693 aa	Predicted RBP	11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	MRPL12	P52815	198 aa	Known RBP	11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	GHRHR	Q02643	423 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	TYRO3	Q06418	890 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	RASA3	Q14644	834 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	HS1BP3	Q53T59	392 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	CRYGN	Q8WXF5	182 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	AK8	Q96MA6	479 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	MBOAT7	Q96N66	472 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	SH2D4A	Q9H788	454 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	ARHGEF10L	Q9HCE6	1279 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	GPRC5D	Q9NZD1	345 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	KCNH3	Q9ULD8	1083 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	ZBTB21	Q9ULJ3	1066 aa		11.2	□□□□□ -0.62
TMEM116-216	ENST00000552800	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800		H7C1D1	291 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	ADAMTS3	O15072	1205 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	MAP3K7	O43318	606 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	PPP1R11	O60927	126 aa	Predicted RBP	11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	NDUFB10	O96000	172 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	BMP3	P12645	472 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	CYP3A7	P24462	503 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	MARCKS	P29966	332 aa	Predicted RBP	11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	USP11	P51784	963 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	PTGDR	Q13258	359 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	LRRC47	Q8N1G4	583 aa	Known RBP	11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	FAM200A	Q8TCP9	573 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	LPAR1	Q92633	364 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	NAP1L4	Q99733	375 aa	Known RBP	11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	SYT17	Q9BSW7	474 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	WDR18	Q9BV38	432 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	ADAM33	Q9BZ11	813 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	CCSER1	Q9C0I3	900 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	TMEM39B	Q9GZU3	492 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	UBA5	Q9GZZ9	404 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	KIAA1683	Q9H0B3	1180 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	VCPKMT	Q9H867	229 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	PNMA2	Q9UL42	364 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	MRVI1	Q9Y6F6	885 aa		11.19	□□□□□ -0.62
TMEM116-216	ENST00000552800	CLRN2	A0PK11	232 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	MPHOSPH10	O00566	681 aa	Known RBP	11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	WNT7A	O00755	349 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	SLURP2	P0DP57	97 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	FDX1	P10109	184 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	NAPA	P54920	295 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	CCDC173	Q0VFZ6	552 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	PDIA5	Q14554	519 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	NONO	Q15233	471 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	TTBK2	Q6IQ55	1244 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	KRBA2	Q6ZNG9	492 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	PIK3AP1	Q6ZUJ8	805 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	FAM160B2	Q86V87	743 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	TRIML1	Q8N9V2	468 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	CHURC1	Q8WUH1	139 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	MTMR9	Q96QG7	549 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	GOPC	Q9HD26	462 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	ANO10	Q9NW15	660 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	FAM13B	Q9NYF5	915 aa		11.18	□□□□□ -0.62
TMEM116-216	ENST00000552800	MAP3K20	Q9NYL2	800 aa	Known RBP	11.18	□□□□□ -0.62

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