RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 TRIM17Q9Y577 477 aa10.62□□□□□ -0.71
CCDC59-207ENST00000552606 MYH7BA7E2Y1 1941 aa10.62□□□□□ -0.71
CCDC59-207ENST00000552606 GOLGA8AA7E2F4 631 aa10.61□□□□□ -0.71
CCDC59-207ENST00000552606 FMNL1O95466 1100 aaPredicted RBP10.61□□□□□ -0.71
CCDC59-207ENST00000552606 SMARCA1P28370 1054 aa10.61□□□□□ -0.71
CCDC59-207ENST00000552606 PDIA3P30101 505 aaKnown RBP10.61□□□□□ -0.71
CCDC59-207ENST00000552606 AK2P54819 239 aa10.61□□□□□ -0.71
CCDC59-207ENST00000552606 FGD1P98174 961 aa10.61□□□□□ -0.71
CCDC59-207ENST00000552606 RTN1Q16799 776 aa10.61□□□□□ -0.71
CCDC59-207ENST00000552606 COL13A1Q5TAT6 717 aaPredicted RBP10.61□□□□□ -0.71
CCDC59-207ENST00000552606 CCDC174Q6PII3 467 aa10.61□□□□□ -0.71
CCDC59-207ENST00000552606 PLEKHH3Q7Z736 793 aa10.61□□□□□ -0.71
CCDC59-207ENST00000552606 ABRAQ8N0Z2 381 aa10.61□□□□□ -0.71
CCDC59-207ENST00000552606 CPXCR1Q8N123 301 aa10.61□□□□□ -0.71
CCDC59-207ENST00000552606 SOCS4Q8WXH5 440 aa10.61□□□□□ -0.71
CCDC59-207ENST00000552606 MROH8Q9H579 483 aa10.61□□□□□ -0.71
CCDC59-207ENST00000552606 RBM28Q9NW13 759 aaKnown RBP10.61□□□□□ -0.71
CCDC59-207ENST00000552606 CCPG1Q9ULG6 757 aa10.61□□□□□ -0.71
CCDC59-207ENST00000552606 PTPN22Q9Y2R2 807 aa10.61□□□□□ -0.71
CCDC59-207ENST00000552606 SLC15A5A6NIM6 579 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 ZBTB5O15062 677 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 MAP3K13O43283 966 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 LARGE1O95461 756 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 IGHA2P01877 340 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 HOXC6P09630 235 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 PTPREP23469 700 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 FLT3LGP49771 235 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 METAP2P50579 478 aaKnown RBP eCLIP10.6□□□□□ -0.71
CCDC59-207ENST00000552606 PRMT2P55345 433 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 IRF5Q13568 498 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 NTRK3Q16288 839 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 TKFCQ3LXA3 575 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 MUM1L1Q5H9M0 696 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 FBXO46Q6PJ61 603 aaPredicted RBP10.6□□□□□ -0.71
CCDC59-207ENST00000552606 NCAPG2Q86XI2 1143 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 CMTR1Q8N1G2 835 aaKnown RBP10.6□□□□□ -0.71
CCDC59-207ENST00000552606 CHST13Q8NET6 341 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 CLEC4DQ8WXI8 215 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 COA7Q96BR5 231 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 ZNF274Q96GC6 653 aaPredicted RBP10.6□□□□□ -0.71
CCDC59-207ENST00000552606 PIGSQ96S52 555 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 APBA2Q99767 749 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 LZTS2Q9BRK4 669 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 ACAD9Q9H845 621 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 RNF146Q9NTX7 359 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 TPCN1Q9ULQ1 816 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 COLQQ9Y215 455 aaPredicted RBP10.6□□□□□ -0.71
CCDC59-207ENST00000552606 PTCH2Q9Y6C5 1203 aa10.6□□□□□ -0.71
CCDC59-207ENST00000552606 DOCK5Q9H7D0 1870 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 BRCA2P51587 3418 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 DNAJC25-GNG10A0A024R161 153 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 NFIBO00712 420 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 OPLAHO14841 1288 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 ALAS1P13196 640 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 ADORA2AP29274 412 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 GNAQP50148 359 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 NEK4P51957 841 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 GHRHRQ02643 423 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 ST3GAL1Q11201 340 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 MAP2K5Q13163 448 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 ARHGEF6Q15052 776 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 PPP2R5BQ15173 497 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 RABEP1Q15276 862 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 PKN2Q16513 984 aaKnown RBP10.59□□□□□ -0.71
CCDC59-207ENST00000552606 SYNE3Q6ZMZ3 975 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 FGD4Q96M96 766 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 NUDT12Q9BQG2 462 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 LARP6Q9BRS8 491 aaKnown RBP10.59□□□□□ -0.71
CCDC59-207ENST00000552606 MCOLN1Q9GZU1 580 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 NCOA5Q9HCD5 579 aaKnown RBP10.59□□□□□ -0.71
CCDC59-207ENST00000552606 A1CFQ9NQ94 594 aaKnown RBP10.59□□□□□ -0.71
CCDC59-207ENST00000552606 HOMER2Q9NSB8 354 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 FBXO40Q9UH90 709 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 PNMA2Q9UL42 364 aa10.59□□□□□ -0.71
CCDC59-207ENST00000552606 CTDP1Q9Y5B0 961 aaPredicted RBP10.59□□□□□ -0.71
CCDC59-207ENST00000552606 ASTN1O14525 1302 aa10.58□□□□□ -0.71
CCDC59-207ENST00000552606 ABCB11O95342 1321 aa10.58□□□□□ -0.71
CCDC59-207ENST00000552606 PNMA6FA0A0J9YX94 578 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 STRNO43815 780 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 DHX16O60231 1041 aaKnown RBP10.58□□□□□ -0.72
CCDC59-207ENST00000552606 COBLO75128 1261 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 CD2BP2O95400 341 aaKnown RBP10.58□□□□□ -0.72
CCDC59-207ENST00000552606 FCER1AP12319 257 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 XRCC5P13010 732 aaKnown RBP10.58□□□□□ -0.72
CCDC59-207ENST00000552606 HOXD10P28358 340 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 ADD1P35611 737 aaKnown RBP10.58□□□□□ -0.72
CCDC59-207ENST00000552606 SCRN1Q12765 414 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 ANKRD1Q15327 319 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 USH1GQ495M9 461 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 WDR78Q5VTH9 848 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 SLC30A10Q6XR72 485 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 FBXO11Q86XK2 927 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 HOMER1Q86YM7 354 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 NPLOC4Q8TAT6 608 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 TRERF1Q96PN7 1200 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 MMP19Q99542 508 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 AMNQ9BXJ7 453 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 IVNS1ABPQ9Y6Y0 642 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 PFASO15067 1338 aa10.58□□□□□ -0.72
CCDC59-207ENST00000552606 WDR81Q562E7 1941 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms