RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 DUSP11O75319 330 aaKnown RBP16.28■□□□□ 0.2
SMARCC2-212ENST00000552566 RAG1P15918 1043 aa16.28■□□□□ 0.2
SMARCC2-212ENST00000552566 RBM25P49756 843 aaKnown RBP16.28■□□□□ 0.2
SMARCC2-212ENST00000552566 IRX5P78411 483 aaPredicted RBP16.28■□□□□ 0.2
SMARCC2-212ENST00000552566 CCDC144BQ3MJ40 725 aa16.28■□□□□ 0.2
SMARCC2-212ENST00000552566 MFSD6Q6ZSS7 791 aa16.28■□□□□ 0.2
SMARCC2-212ENST00000552566 NUP133Q8WUM0 1156 aa16.28■□□□□ 0.2
SMARCC2-212ENST00000552566 FGD4Q96M96 766 aa16.28■□□□□ 0.2
SMARCC2-212ENST00000552566 TBC1D32Q96NH3 1257 aa16.28■□□□□ 0.2
SMARCC2-212ENST00000552566 TRERF1Q96PN7 1200 aa16.28■□□□□ 0.2
SMARCC2-212ENST00000552566 TSEN34Q9BSV6 310 aaKnown RBP16.28■□□□□ 0.2
SMARCC2-212ENST00000552566 SPC25Q9HBM1 224 aa16.28■□□□□ 0.2
SMARCC2-212ENST00000552566 ANAPC4Q9UJX5 808 aa16.28■□□□□ 0.2
SMARCC2-212ENST00000552566 LAMA3Q16787 3333 aa16.28■□□□□ 0.2
SMARCC2-212ENST00000552566 ZNF536O15090 1300 aa16.27■□□□□ 0.2
SMARCC2-212ENST00000552566 MOXD2PA6NHM9 499 aa16.27■□□□□ 0.2
SMARCC2-212ENST00000552566 DCDC2CA8MYV0 355 aa16.27■□□□□ 0.2
SMARCC2-212ENST00000552566 CYP21A2P08686 494 aa16.27■□□□□ 0.2
SMARCC2-212ENST00000552566 PCP11498 1178 aaKnown RBP16.27■□□□□ 0.2
SMARCC2-212ENST00000552566 ITGB8P26012 769 aa16.27■□□□□ 0.2
SMARCC2-212ENST00000552566 TKFCQ3LXA3 575 aa16.27■□□□□ 0.2
SMARCC2-212ENST00000552566 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.27■□□□□ 0.2
SMARCC2-212ENST00000552566 RALYLQ86SE5 291 aaKnown RBP16.27■□□□□ 0.2
SMARCC2-212ENST00000552566 KLHDC9Q8NEP7 349 aa16.27■□□□□ 0.2
SMARCC2-212ENST00000552566 CNNM2Q9H8M5 875 aa16.27■□□□□ 0.2
SMARCC2-212ENST00000552566 A1CFQ9NQ94 594 aaKnown RBP16.27■□□□□ 0.2
SMARCC2-212ENST00000552566 PRR12Q9ULL5 1215 aa16.27■□□□□ 0.2
SMARCC2-212ENST00000552566 STXBP5LQ9Y2K9 1186 aa16.27■□□□□ 0.2
SMARCC2-212ENST00000552566 ADCY6O43306 1168 aa16.26■□□□□ 0.19
SMARCC2-212ENST00000552566 ORC4O43929 436 aa16.26■□□□□ 0.19
SMARCC2-212ENST00000552566 HMGB1P09429 215 aaKnown RBP16.26■□□□□ 0.19
SMARCC2-212ENST00000552566 SLC16A2P36021 539 aa16.26■□□□□ 0.19
SMARCC2-212ENST00000552566 TSGA10IPQ3SY00 556 aa16.26■□□□□ 0.19
SMARCC2-212ENST00000552566 NSMFQ6X4W1 530 aa16.26■□□□□ 0.19
SMARCC2-212ENST00000552566 GLT1D1Q96MS3 346 aa16.26■□□□□ 0.19
SMARCC2-212ENST00000552566 KRT23Q9C075 422 aa16.26■□□□□ 0.19
SMARCC2-212ENST00000552566 CCPG1Q9ULG6 757 aa16.26■□□□□ 0.19
SMARCC2-212ENST00000552566 SNX14Q9Y5W7 946 aa16.26■□□□□ 0.19
SMARCC2-212ENST00000552566 SOWAHBA6NEL2 793 aa16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 ASB14A6NK59 587 aa16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 PLA2G6O60733 806 aa16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 ASGR1P07306 291 aa16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 FAAP100Q0VG06 881 aa16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 MUM1L1Q5H9M0 696 aa16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 GNASQ5JWF2 1037 aa16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 AKNAD1Q5T1N1 836 aa16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 ZNF697Q5TEC3 545 aa16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 CCSAPQ6IQ19 270 aaPredicted RBP16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 TTBK2Q6IQ55 1244 aa16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 FAM133AQ8N9E0 248 aa16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 PCSK9Q8NBP7 692 aaKnown RBP16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 IL27Q8NEV9 243 aa16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 NCOA7Q8NI08 942 aa16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 DCAF4Q8WV16 495 aa16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 KCNB2Q92953 911 aa16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 GPCPD1Q9NPB8 672 aa16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 DDX49Q9Y6V7 483 aaKnown RBP16.25■□□□□ 0.19
SMARCC2-212ENST00000552566 FRMPD2Q68DX3 1309 aaPredicted RBP16.24■□□□□ 0.19
SMARCC2-212ENST00000552566 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.24■□□□□ 0.19
SMARCC2-212ENST00000552566 E7EWF7 191 aa16.24■□□□□ 0.19
SMARCC2-212ENST00000552566 KIAA0355O15063 1070 aa16.24■□□□□ 0.19
SMARCC2-212ENST00000552566 NT5C2P49902 561 aa16.24■□□□□ 0.19
SMARCC2-212ENST00000552566 EPHB4P54760 987 aa16.24■□□□□ 0.19
SMARCC2-212ENST00000552566 TNFAIP2Q03169 654 aa16.24■□□□□ 0.19
SMARCC2-212ENST00000552566 FAM109BQ6ICB4 259 aaPredicted RBP16.24■□□□□ 0.19
SMARCC2-212ENST00000552566 EEPD1Q7L9B9 569 aa16.24■□□□□ 0.19
SMARCC2-212ENST00000552566 ANKRD33Q7Z3H0 272 aa16.24■□□□□ 0.19
SMARCC2-212ENST00000552566 RNPC3Q96LT9 517 aaKnown RBP16.24■□□□□ 0.19
SMARCC2-212ENST00000552566 JAKMIP1Q96N16 626 aaKnown RBP16.24■□□□□ 0.19
SMARCC2-212ENST00000552566 NEK1Q96PY6 1258 aa16.24■□□□□ 0.19
SMARCC2-212ENST00000552566 TMEM47Q9BQJ4 181 aa16.24■□□□□ 0.19
SMARCC2-212ENST00000552566 GREB1LQ9C091 1923 aaPredicted RBP16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 DLL1O00548 723 aa16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 FGRP09769 529 aa16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 TOP1P11387 765 aaKnown RBP16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 CST5P28325 142 aaPredicted RBP16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 GJA9P57773 515 aa16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 BEX3Q00994 111 aa16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 FPGSQ05932 587 aa16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 RABEP1Q15276 862 aa16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 SYDE2Q5VT97 1194 aa16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 BLOC1S2Q6QNY1 142 aa16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 RASEFQ8IZ41 740 aa16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 ESR2Q92731 530 aa16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 TOX2Q96NM4 488 aa16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 PURBQ96QR8 312 aaKnown RBP16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 TM6SF1Q9BZW5 370 aa16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 KATNBL1Q9H079 304 aa16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 UPF3AQ9H1J1 476 aaKnown RBP16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 CYP39A1Q9NYL5 469 aa16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 CYP46A1Q9Y6A2 500 aa16.23■□□□□ 0.19
SMARCC2-212ENST00000552566 ELP1O95163 1332 aa16.22■□□□□ 0.19
SMARCC2-212ENST00000552566 A0A0U1RQG5 324 aaPredicted RBP16.22■□□□□ 0.19
SMARCC2-212ENST00000552566 ICAM1P05362 532 aa16.22■□□□□ 0.19
SMARCC2-212ENST00000552566 CASTP20810 708 aaKnown RBP16.22■□□□□ 0.19
SMARCC2-212ENST00000552566 FGD1P98174 961 aa16.22■□□□□ 0.19
SMARCC2-212ENST00000552566 GUCD1Q96NT3 240 aa16.22■□□□□ 0.19
SMARCC2-212ENST00000552566 AP5M1Q9H0R1 490 aa16.22■□□□□ 0.19
SMARCC2-212ENST00000552566 MYH8P13535 1937 aa16.21■□□□□ 0.19
SMARCC2-212ENST00000552566 PTPDC1A2A3K4 754 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms