RNA–Protein interactions for RNA: ENST00000552442.1

UBE2N-206, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 5 BASIC

Gene UBE2N, Length 607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-206ENST00000552442 PRDM9Q9NQV7 894 aa10.73□□□□□ -0.69
UBE2N-206ENST00000552442 ANAPC4Q9UJX5 808 aa10.73□□□□□ -0.69
UBE2N-206ENST00000552442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.73□□□□□ -0.69
UBE2N-206ENST00000552442 MYH6P13533 1939 aa10.73□□□□□ -0.69
UBE2N-206ENST00000552442 ZMYM6O95789 1325 aa10.73□□□□□ -0.69
UBE2N-206ENST00000552442 ALPK3Q96L96 1907 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 MCM3APO60318 1980 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 HIP1O00291 1037 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 TTLL1O95922 423 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 NDUFB10O96000 172 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 GJB1P08034 283 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 HSPD1P10809 573 aaKnown RBP10.72□□□□□ -0.69
UBE2N-206ENST00000552442 XRCC5P13010 732 aaKnown RBP10.72□□□□□ -0.69
UBE2N-206ENST00000552442 RGS2P41220 211 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 TFAP4Q01664 338 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 PLS1Q14651 629 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 TMEM132AQ24JP5 1023 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 FAM47AQ5JRC9 791 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 PPP1R18Q6NYC8 613 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 TRIB2Q92519 343 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 SHISA4Q96DD7 197 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 APBA2Q99767 749 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 SPATC1LQ9H0A9 340 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.72□□□□□ -0.69
UBE2N-206ENST00000552442 MTMR4Q9NYA4 1195 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 CLIP2Q9UDT6 1046 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 IVNS1ABPQ9Y6Y0 642 aa10.72□□□□□ -0.69
UBE2N-206ENST00000552442 SMCHD1A6NHR9 2005 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 SLC15A5A6NIM6 579 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 TSPY2A6NKD2 308 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 F5H6K3 240 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 ORC4O43929 436 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 RANBP6O60518 1105 aaKnown RBP10.71□□□□□ -0.69
UBE2N-206ENST00000552442 FGAP02671 866 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 ZKSCAN1P17029 563 aaPredicted RBP10.71□□□□□ -0.69
UBE2N-206ENST00000552442 JUNDP17535 347 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 GJA8P48165 433 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 KLRC3Q07444 240 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 TTC22Q5TAA0 569 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 CWC27Q6UX04 472 aaKnown RBP10.71□□□□□ -0.69
UBE2N-206ENST00000552442 TRMT44Q8IYL2 757 aaKnown RBP10.71□□□□□ -0.69
UBE2N-206ENST00000552442 LRRC47Q8N1G4 583 aaKnown RBP10.71□□□□□ -0.69
UBE2N-206ENST00000552442 SHCBP1Q8NEM2 672 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 USP6NLQ92738 828 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 MKL1Q969V6 931 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 NUP88Q99567 741 aaPredicted RBP10.71□□□□□ -0.69
UBE2N-206ENST00000552442 MOV10L1Q9BXT6 1211 aaKnown RBP10.71□□□□□ -0.69
UBE2N-206ENST00000552442 TOMM22Q9NS69 142 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 FBXO28Q9NVF7 368 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 PPP1R9AQ9ULJ8 1098 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 SYNPO2Q9UMS6 1093 aa10.71□□□□□ -0.69
UBE2N-206ENST00000552442 GSPT1P15170 499 aaKnown RBP10.7□□□□□ -0.7
UBE2N-206ENST00000552442 MMP16P51512 607 aa10.7□□□□□ -0.7
UBE2N-206ENST00000552442 HAND2P61296 217 aa10.7□□□□□ -0.7
UBE2N-206ENST00000552442 TRIM32Q13049 653 aa10.7□□□□□ -0.7
UBE2N-206ENST00000552442 GRB14Q14449 540 aa10.7□□□□□ -0.7
UBE2N-206ENST00000552442 PPP2R2DQ66LE6 453 aa10.7□□□□□ -0.7
UBE2N-206ENST00000552442 U2AF1L4Q8WU68 220 aaKnown RBP10.7□□□□□ -0.7
UBE2N-206ENST00000552442 DEFB118Q96PH6 123 aa10.7□□□□□ -0.7
UBE2N-206ENST00000552442 SLF1Q9BQI6 1058 aa10.7□□□□□ -0.7
UBE2N-206ENST00000552442 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.7□□□□□ -0.76e-9■■■■□ 22.2
UBE2N-206ENST00000552442 INCENPQ9NQS7 918 aa10.7□□□□□ -0.7
UBE2N-206ENST00000552442 PAK6Q9NQU5 681 aaPredicted RBP10.7□□□□□ -0.7
UBE2N-206ENST00000552442 ADAMTS5Q9UNA0 930 aa10.7□□□□□ -0.7
UBE2N-206ENST00000552442 TACC3Q9Y6A5 838 aa10.7□□□□□ -0.7
UBE2N-206ENST00000552442 RPTORQ8N122 1335 aa10.69□□□□□ -0.7
UBE2N-206ENST00000552442 VWA5AO00534 786 aa10.69□□□□□ -0.7
UBE2N-206ENST00000552442 DXOO77932 396 aaKnown RBP10.69□□□□□ -0.7
UBE2N-206ENST00000552442 SGPL1O95470 568 aa10.69□□□□□ -0.7
UBE2N-206ENST00000552442 ERCC3P19447 782 aa10.69□□□□□ -0.7
UBE2N-206ENST00000552442 TMEM132BQ14DG7 1078 aa10.69□□□□□ -0.7
UBE2N-206ENST00000552442 CCL14Q16627 93 aa10.69□□□□□ -0.7
UBE2N-206ENST00000552442 RRP12Q5JTH9 1297 aaKnown RBP10.69□□□□□ -0.7
UBE2N-206ENST00000552442 SLFN13Q68D06 897 aa10.69□□□□□ -0.7
UBE2N-206ENST00000552442 DESI1Q6ICB0 168 aa10.69□□□□□ -0.7
UBE2N-206ENST00000552442 NCAPG2Q86XI2 1143 aa10.69□□□□□ -0.7
UBE2N-206ENST00000552442 GMCL1P1Q8NEA9 526 aa10.69□□□□□ -0.7
UBE2N-206ENST00000552442 TSC1Q92574 1164 aa10.69□□□□□ -0.7
UBE2N-206ENST00000552442 MROH8Q9H579 483 aa10.69□□□□□ -0.7
UBE2N-206ENST00000552442 HMX1Q9NP08 348 aaPredicted RBP10.69□□□□□ -0.7
UBE2N-206ENST00000552442 ISY1Q9ULR0 285 aaKnown RBP10.69□□□□□ -0.7
UBE2N-206ENST00000552442 STX8Q9UNK0 236 aa10.69□□□□□ -0.7
UBE2N-206ENST00000552442 CFAP99D6REC4 459 aa10.68□□□□□ -0.7
UBE2N-206ENST00000552442 RNF223E7ERA6 249 aa10.68□□□□□ -0.7
UBE2N-206ENST00000552442 STRNO43815 780 aa10.68□□□□□ -0.7
UBE2N-206ENST00000552442 NMT2O60551 498 aa10.68□□□□□ -0.7
UBE2N-206ENST00000552442 FARP2O94887 1054 aaPredicted RBP10.68□□□□□ -0.7
UBE2N-206ENST00000552442 SLC25A27O95847 323 aa10.68□□□□□ -0.7
UBE2N-206ENST00000552442 TFRCP02786 760 aaKnown RBP10.68□□□□□ -0.7
UBE2N-206ENST00000552442 HOXC6P09630 235 aa10.68□□□□□ -0.7
UBE2N-206ENST00000552442 FGRP09769 529 aa10.68□□□□□ -0.7
UBE2N-206ENST00000552442 PCP11498 1178 aaKnown RBP10.68□□□□□ -0.7
UBE2N-206ENST00000552442 BMP3P12645 472 aa10.68□□□□□ -0.7
UBE2N-206ENST00000552442 CAPN2P17655 700 aa10.68□□□□□ -0.7
UBE2N-206ENST00000552442 ADORA2AP29274 412 aa10.68□□□□□ -0.7
UBE2N-206ENST00000552442 COPB2P35606 906 aa10.68□□□□□ -0.7
UBE2N-206ENST00000552442 AKNAD1Q5T1N1 836 aa10.68□□□□□ -0.7
UBE2N-206ENST00000552442 MAP3K21Q5TCX8 1036 aa10.68□□□□□ -0.7
UBE2N-206ENST00000552442 MFSD6Q6ZSS7 791 aa10.68□□□□□ -0.7
UBE2N-206ENST00000552442 DPP9Q86TI2 863 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms