RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 PDE1AP54750 535 aa19.07■□□□□ 0.64
CALCOCO1-220ENST00000552282 AAMPQ13685 434 aa19.07■□□□□ 0.64
CALCOCO1-220ENST00000552282 VPS53Q5VIR6 699 aa19.07■□□□□ 0.64
CALCOCO1-220ENST00000552282 CCDC129Q6ZRS4 1044 aa19.07■□□□□ 0.64
CALCOCO1-220ENST00000552282 TRERF1Q96PN7 1200 aa19.07■□□□□ 0.64
CALCOCO1-220ENST00000552282 HOMER2Q9NSB8 354 aa19.07■□□□□ 0.64
CALCOCO1-220ENST00000552282 LAMA4Q16363 1823 aa19.07■□□□□ 0.64
CALCOCO1-220ENST00000552282 IRX5P78411 483 aaPredicted RBP19.06■□□□□ 0.64
CALCOCO1-220ENST00000552282 CTDSPL2Q05D32 466 aa19.06■□□□□ 0.64
CALCOCO1-220ENST00000552282 GNASQ5JWF2 1037 aa19.06■□□□□ 0.64
CALCOCO1-220ENST00000552282 MUC3AQ02505 3323 aa19.05■□□□□ 0.64
CALCOCO1-220ENST00000552282 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.05■□□□□ 0.64
CALCOCO1-220ENST00000552282 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.05■□□□□ 0.64
CALCOCO1-220ENST00000552282 NMT2O60551 498 aa19.05■□□□□ 0.64
CALCOCO1-220ENST00000552282 TNFAIP2Q03169 654 aa19.05■□□□□ 0.64
CALCOCO1-220ENST00000552282 PPIGQ13427 754 aaKnown RBP eCLIP19.05■□□□□ 0.644e-6■■□□□ 13.5
CALCOCO1-220ENST00000552282 TAPT1Q6NXT6 567 aa19.05■□□□□ 0.64
CALCOCO1-220ENST00000552282 CCDC174Q6PII3 467 aa19.05■□□□□ 0.64
CALCOCO1-220ENST00000552282 KCTD1Q719H9 257 aa19.05■□□□□ 0.64
CALCOCO1-220ENST00000552282 FAM161BQ96MY7 647 aa19.05■□□□□ 0.64
CALCOCO1-220ENST00000552282 VTA1Q9NP79 307 aa19.05■□□□□ 0.64
CALCOCO1-220ENST00000552282 PNMA2Q9UL42 364 aa19.05■□□□□ 0.64
CALCOCO1-220ENST00000552282 CHD7Q9P2D1 2997 aa19.04■□□□□ 0.64
CALCOCO1-220ENST00000552282 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.04■□□□□ 0.64
CALCOCO1-220ENST00000552282 TLR3O15455 904 aaKnown RBP19.04■□□□□ 0.64
CALCOCO1-220ENST00000552282 FGAP02671 866 aa19.04■□□□□ 0.64
CALCOCO1-220ENST00000552282 SNHG28P0DPA3 235 aa19.04■□□□□ 0.64
CALCOCO1-220ENST00000552282 ALAS1P13196 640 aa19.04■□□□□ 0.64
CALCOCO1-220ENST00000552282 SLC4A3P48751 1232 aa19.04■□□□□ 0.64
CALCOCO1-220ENST00000552282 IKQ13123 557 aaPredicted RBP19.04■□□□□ 0.64
CALCOCO1-220ENST00000552282 MCMDC2Q4G0Z9 681 aa19.04■□□□□ 0.64
CALCOCO1-220ENST00000552282 MUM1L1Q5H9M0 696 aa19.04■□□□□ 0.64
CALCOCO1-220ENST00000552282 IQSEC1Q6DN90 963 aa19.04■□□□□ 0.64
CALCOCO1-220ENST00000552282 TLK2Q86UE8 772 aa19.04■□□□□ 0.64
CALCOCO1-220ENST00000552282 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.04■□□□□ 0.642e-6■■□□□ 12.4
CALCOCO1-220ENST00000552282 MAF1Q9H063 256 aa19.04■□□□□ 0.64
CALCOCO1-220ENST00000552282 WDR19Q8NEZ3 1342 aa19.03■□□□□ 0.64
CALCOCO1-220ENST00000552282 A0A0D9SFI3 127 aa19.03■□□□□ 0.64
CALCOCO1-220ENST00000552282 RANBP6O60518 1105 aaKnown RBP19.03■□□□□ 0.64
CALCOCO1-220ENST00000552282 TOP1P11387 765 aaKnown RBP19.03■□□□□ 0.64
CALCOCO1-220ENST00000552282 DNAJB2P25686 324 aa19.03■□□□□ 0.64
CALCOCO1-220ENST00000552282 TMEM240Q5SV17 173 aa19.03■□□□□ 0.64
CALCOCO1-220ENST00000552282 ANKRD45Q5TZF3 282 aa19.03■□□□□ 0.64
CALCOCO1-220ENST00000552282 PSRC1Q6PGN9 363 aaPredicted RBP19.03■□□□□ 0.64
CALCOCO1-220ENST00000552282 C16orf59Q7L2K0 433 aa19.03■□□□□ 0.64
CALCOCO1-220ENST00000552282 RASGRP2Q7LDG7 609 aa19.03■□□□□ 0.64
CALCOCO1-220ENST00000552282 MAFAQ8NHW3 353 aaPredicted RBP19.03■□□□□ 0.64
CALCOCO1-220ENST00000552282 INCENPQ9NQS7 918 aa19.03■□□□□ 0.64
CALCOCO1-220ENST00000552282 CCPG1Q9ULG6 757 aa19.03■□□□□ 0.64
CALCOCO1-220ENST00000552282 TTC28Q96AY4 2481 aa19.02■□□□□ 0.64
CALCOCO1-220ENST00000552282 RBM47A0AV96 593 aaKnown RBP19.02■□□□□ 0.64
CALCOCO1-220ENST00000552282 HSPD1P10809 573 aaKnown RBP19.02■□□□□ 0.64
CALCOCO1-220ENST00000552282 FSCN1Q16658 493 aaKnown RBP19.02■□□□□ 0.64
CALCOCO1-220ENST00000552282 TMEM199Q8N511 208 aa19.02■□□□□ 0.64
CALCOCO1-220ENST00000552282 TTC14Q96N46 770 aa19.02■□□□□ 0.64
CALCOCO1-220ENST00000552282 COL25A1Q9BXS0 654 aaPredicted RBP19.02■□□□□ 0.64
CALCOCO1-220ENST00000552282 ADD3Q9UEY8 706 aaKnown RBP19.02■□□□□ 0.64
CALCOCO1-220ENST00000552282 ZBTB47Q9UFB7 747 aaPredicted RBP19.02■□□□□ 0.64
CALCOCO1-220ENST00000552282 GRIN2DO15399 1336 aa19.01■□□□□ 0.63
CALCOCO1-220ENST00000552282 SCN10AQ9Y5Y9 1956 aa19.01■□□□□ 0.63
CALCOCO1-220ENST00000552282 PDHBP11177 359 aa19.01■□□□□ 0.63
CALCOCO1-220ENST00000552282 SMPD1P17405 629 aa19.01■□□□□ 0.63
CALCOCO1-220ENST00000552282 SYDE2Q5VT97 1194 aa19.01■□□□□ 0.63
CALCOCO1-220ENST00000552282 SMC5Q8IY18 1101 aa19.01■□□□□ 0.63
CALCOCO1-220ENST00000552282 MYLIPQ8WY64 445 aa19.01■□□□□ 0.63
CALCOCO1-220ENST00000552282 FAM227BQ96M60 508 aa19.01■□□□□ 0.63
CALCOCO1-220ENST00000552282 TMEM47Q9BQJ4 181 aa19.01■□□□□ 0.63
CALCOCO1-220ENST00000552282 CCDC171Q6TFL3 1326 aa19■□□□□ 0.63
CALCOCO1-220ENST00000552282 ZEB2O60315 1214 aa19■□□□□ 0.63
CALCOCO1-220ENST00000552282 CSF2RAP15509 400 aa19■□□□□ 0.63
CALCOCO1-220ENST00000552282 EDNRBP24530 442 aa19■□□□□ 0.63
CALCOCO1-220ENST00000552282 BEX3Q00994 111 aa19■□□□□ 0.63
CALCOCO1-220ENST00000552282 DUSP28Q4G0W2 176 aa19■□□□□ 0.63
CALCOCO1-220ENST00000552282 CXCL17Q6UXB2 119 aa19■□□□□ 0.63
CALCOCO1-220ENST00000552282 ZNF589Q86UQ0 364 aaPredicted RBP19■□□□□ 0.63
CALCOCO1-220ENST00000552282 CRBNQ96SW2 442 aa19■□□□□ 0.63
CALCOCO1-220ENST00000552282 OSBPL3Q9H4L5 887 aa19■□□□□ 0.63
CALCOCO1-220ENST00000552282 ISY1Q9ULR0 285 aaKnown RBP19■□□□□ 0.63
CALCOCO1-220ENST00000552282 FOSL2P15408 326 aa18.99■□□□□ 0.63
CALCOCO1-220ENST00000552282 ALDH5A1P51649 535 aaPredicted RBP18.99■□□□□ 0.63
CALCOCO1-220ENST00000552282 ZNF543Q08ER8 600 aa18.99■□□□□ 0.63
CALCOCO1-220ENST00000552282 ITGA7Q13683 1181 aa18.99■□□□□ 0.63
CALCOCO1-220ENST00000552282 CCDC96Q2M329 555 aa18.99■□□□□ 0.63
CALCOCO1-220ENST00000552282 FBXO16Q8IX29 292 aaPredicted RBP18.99■□□□□ 0.63
CALCOCO1-220ENST00000552282 CLEC4DQ8WXI8 215 aa18.99■□□□□ 0.63
CALCOCO1-220ENST00000552282 HERVK_113Q902F9 699 aa18.99■□□□□ 0.63
CALCOCO1-220ENST00000552282 AP5M1Q9H0R1 490 aa18.99■□□□□ 0.63
CALCOCO1-220ENST00000552282 IL23AQ9NPF7 189 aa18.99■□□□□ 0.63
CALCOCO1-220ENST00000552282 TRANK1O15050 2925 aa18.98■□□□□ 0.63
CALCOCO1-220ENST00000552282 NFIBO00712 420 aa18.98■□□□□ 0.63
CALCOCO1-220ENST00000552282 AKNAD1Q5T1N1 836 aa18.98■□□□□ 0.63
CALCOCO1-220ENST00000552282 TTBK2Q6IQ55 1244 aa18.98■□□□□ 0.63
CALCOCO1-220ENST00000552282 NSMFQ6X4W1 530 aa18.98■□□□□ 0.63
CALCOCO1-220ENST00000552282 TIFAQ96CG3 184 aa18.98■□□□□ 0.63
CALCOCO1-220ENST00000552282 RNF41Q9H4P4 317 aaPredicted RBP18.98■□□□□ 0.63
CALCOCO1-220ENST00000552282 PDGFCQ9NRA1 345 aa18.98■□□□□ 0.63
CALCOCO1-220ENST00000552282 MFAP1P55081 439 aaKnown RBP18.97■□□□□ 0.63
CALCOCO1-220ENST00000552282 SNAP25P60880 206 aa18.97■□□□□ 0.63
CALCOCO1-220ENST00000552282 NMIQ13287 307 aaPredicted RBP18.97■□□□□ 0.63
CALCOCO1-220ENST00000552282 BAATQ14032 418 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms