RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 DCHS1Q96JQ0 3298 aa15.14■□□□□ 0.01
SNRPF-204ENST00000552085 SOWAHBA6NEL2 793 aa15.13■□□□□ 0.01
SNRPF-204ENST00000552085 PITPNM1O00562 1244 aa15.13■□□□□ 0.01
SNRPF-204ENST00000552085 CYP2E1P05181 493 aaPredicted RBP15.13■□□□□ 0.01
SNRPF-204ENST00000552085 POLR3DP05423 398 aaPredicted RBP15.13■□□□□ 0.01
SNRPF-204ENST00000552085 PTPROQ16827 1216 aa15.13■□□□□ 0.01
SNRPF-204ENST00000552085 TIGD5Q53EQ6 642 aa15.13■□□□□ 0.01
SNRPF-204ENST00000552085 SNRNP48Q6IEG0 339 aaKnown RBP15.13■□□□□ 0.01
SNRPF-204ENST00000552085 CLEC10AQ8IUN9 316 aa15.13■□□□□ 0.01
SNRPF-204ENST00000552085 CCDC144CPQ8IYA2 1237 aa15.13■□□□□ 0.01
SNRPF-204ENST00000552085 MIGA1Q8NAN2 632 aa15.13■□□□□ 0.01
SNRPF-204ENST00000552085 FBXO22Q8NEZ5 403 aa15.13■□□□□ 0.01
SNRPF-204ENST00000552085 RAD9AQ99638 391 aa15.13■□□□□ 0.01
SNRPF-204ENST00000552085 TRPC6Q9Y210 931 aa15.13■□□□□ 0.01
SNRPF-204ENST00000552085 SALL2Q9Y467 1007 aaPredicted RBP15.13■□□□□ 0.01
SNRPF-204ENST00000552085 RIPK3Q9Y572 518 aa15.13■□□□□ 0.01
SNRPF-204ENST00000552085 CACNA1HO95180 2353 aa15.13■□□□□ 0.01
SNRPF-204ENST00000552085 FAM186AA6NE01 2351 aa15.12■□□□□ 0.01
SNRPF-204ENST00000552085 ATG2AQ2TAZ0 1938 aa15.12■□□□□ 0.01
SNRPF-204ENST00000552085 PRR23AA6NEV1 266 aa15.12■□□□□ 0.01
SNRPF-204ENST00000552085 DYNC1LI2O43237 492 aaPredicted RBP15.12■□□□□ 0.01
SNRPF-204ENST00000552085 ICA1Q05084 483 aa15.12■□□□□ 0.01
SNRPF-204ENST00000552085 COL19A1Q14993 1142 aa15.12■□□□□ 0.01
SNRPF-204ENST00000552085 SMAD2Q15796 467 aaKnown RBP15.12■□□□□ 0.01
SNRPF-204ENST00000552085 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.12■□□□□ 0.01
SNRPF-204ENST00000552085 HDAC5Q9UQL6 1122 aa15.12■□□□□ 0.01
SNRPF-204ENST00000552085 GJB5O95377 273 aa15.11■□□□□ 0.01
SNRPF-204ENST00000552085 PTGS1P23219 599 aa15.11■□□□□ 0.01
SNRPF-204ENST00000552085 DEFB103AP81534 67 aa15.11■□□□□ 0.01
SNRPF-204ENST00000552085 CCDC184Q52MB2 194 aa15.11■□□□□ 0.01
SNRPF-204ENST00000552085 TCEAL5Q5H9L2 206 aa15.11■□□□□ 0.01
SNRPF-204ENST00000552085 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.11■□□□□ 0.01
SNRPF-204ENST00000552085 BANK1Q8NDB2 785 aa15.11■□□□□ 0.01
SNRPF-204ENST00000552085 FSD1Q9BTV5 496 aa15.11■□□□□ 0.01
SNRPF-204ENST00000552085 PIH1D3Q9NQM4 214 aaKnown RBP15.11■□□□□ 0.01
SNRPF-204ENST00000552085 NLRC5Q86WI3 1866 aa15.11■□□□□ 0.01
SNRPF-204ENST00000552085 H0Y858 1186 aa15.1■□□□□ 0.01
SNRPF-204ENST00000552085 SMPD1P17405 629 aa15.1■□□□□ 0.01
SNRPF-204ENST00000552085 SLC4A3P48751 1232 aa15.1■□□□□ 0.01
SNRPF-204ENST00000552085 VCPP55072 806 aaKnown RBP15.1■□□□□ 0.01
SNRPF-204ENST00000552085 EVX2Q03828 476 aa15.1■□□□□ 0.01
SNRPF-204ENST00000552085 TTC39AQ5SRH9 613 aa15.1■□□□□ 0.01
SNRPF-204ENST00000552085 ANKRD35Q8N283 1001 aa15.1■□□□□ 0.01
SNRPF-204ENST00000552085 CRBNQ96SW2 442 aa15.1■□□□□ 0.01
SNRPF-204ENST00000552085 TLR9Q9NR96 1032 aa15.1■□□□□ 0.01
SNRPF-204ENST00000552085 CLDND1Q9NY35 253 aa15.1■□□□□ 0.01
SNRPF-204ENST00000552085 Q9Y3F1 56 aa15.1■□□□□ 0.01
SNRPF-204ENST00000552085 SCN10AQ9Y5Y9 1956 aa15.1■□□□□ 0.01
SNRPF-204ENST00000552085 MED19A0JLT2 244 aaPredicted RBP15.09■□□□□ 0.01
SNRPF-204ENST00000552085 ZXDAP98168 799 aa15.09■□□□□ 0.01
SNRPF-204ENST00000552085 BFSP2Q13515 415 aa15.09■□□□□ 0.01
SNRPF-204ENST00000552085 FAM83BQ5T0W9 1011 aa15.09■□□□□ 0.01
SNRPF-204ENST00000552085 C17orf80Q9BSJ5 609 aa15.09■□□□□ 0.01
SNRPF-204ENST00000552085 RIF1Q5UIP0 2472 aaKnown RBP15.09■□□□□ 0.01
SNRPF-204ENST00000552085 STXBP3O00186 592 aa15.08■□□□□ 0
SNRPF-204ENST00000552085 MBTPS2O43462 519 aa15.08■□□□□ 0
SNRPF-204ENST00000552085 RGS20O76081 388 aa15.08■□□□□ 0
SNRPF-204ENST00000552085 AKR1B1P15121 316 aa15.08■□□□□ 0
SNRPF-204ENST00000552085 AVPR2P30518 371 aa15.08■□□□□ 0
SNRPF-204ENST00000552085 LTBRP36941 435 aa15.08■□□□□ 0
SNRPF-204ENST00000552085 ZAP70P43403 619 aa15.08■□□□□ 0
SNRPF-204ENST00000552085 NSUN3Q9H649 340 aaKnown RBP15.08■□□□□ 0
SNRPF-204ENST00000552085 KMT2BQ9UMN6 2715 aaPredicted RBP15.08■□□□□ 0
SNRPF-204ENST00000552085 ATP2A1O14983 1001 aa15.07■□□□□ 0
SNRPF-204ENST00000552085 SRGAP3O43295 1099 aa15.07■□□□□ 0
SNRPF-204ENST00000552085 LRRFIP1Q32MZ4 808 aaKnown RBP15.07■□□□□ 0
SNRPF-204ENST00000552085 FAM47CQ5HY64 1035 aa15.07■□□□□ 0
SNRPF-204ENST00000552085 CCDC158Q5M9N0 1113 aa15.07■□□□□ 0
SNRPF-204ENST00000552085 IQSEC1Q6DN90 963 aa15.07■□□□□ 0
SNRPF-204ENST00000552085 RPAINQ86UA6 219 aa15.07■□□□□ 0
SNRPF-204ENST00000552085 CPXCR1Q8N123 301 aa15.07■□□□□ 0
SNRPF-204ENST00000552085 SLF1Q9BQI6 1058 aa15.07■□□□□ 0
SNRPF-204ENST00000552085 GOPCQ9HD26 462 aa15.07■□□□□ 0
SNRPF-204ENST00000552085 POLR3EQ9NVU0 708 aa15.07■□□□□ 0
SNRPF-204ENST00000552085 MCM9Q9NXL9 1143 aa15.07■□□□□ 0
SNRPF-204ENST00000552085 SWAP70Q9UH65 585 aa15.07■□□□□ 0
SNRPF-204ENST00000552085 FBXO40Q9UH90 709 aa15.07■□□□□ 0
SNRPF-204ENST00000552085 MICAL3Q7RTP6 2002 aa15.07■□□□□ 0
SNRPF-204ENST00000552085 RALGAPA2Q2PPJ7 1873 aa15.06■□□□□ 0
SNRPF-204ENST00000552085 ASB14A6NK59 587 aa15.06■□□□□ 0
SNRPF-204ENST00000552085 NCK2O43639 380 aa15.06■□□□□ 0
SNRPF-204ENST00000552085 RAD21O60216 631 aa15.06■□□□□ 0
SNRPF-204ENST00000552085 IDH1O75874 414 aaKnown RBP15.06■□□□□ 0
SNRPF-204ENST00000552085 EEF2P13639 858 aaKnown RBP15.06■□□□□ 0
SNRPF-204ENST00000552085 NBL1P41271 181 aa15.06■□□□□ 0
SNRPF-204ENST00000552085 NUBP1P53384 320 aa15.06■□□□□ 0
SNRPF-204ENST00000552085 CNTN2Q02246 1040 aa15.06■□□□□ 0
SNRPF-204ENST00000552085 SIGLEC14Q08ET2 396 aa15.06■□□□□ 0
SNRPF-204ENST00000552085 CLUL1Q15846 466 aa15.06■□□□□ 0
SNRPF-204ENST00000552085 CNKSR3Q6P9H4 555 aa15.06■□□□□ 0
SNRPF-204ENST00000552085 PURAQ00577 322 aaKnown RBP15.05■□□□□ -0
SNRPF-204ENST00000552085 SMAD4Q13485 552 aaKnown RBP15.05■□□□□ -0
SNRPF-204ENST00000552085 CTC1Q2NKJ3 1217 aa15.05■□□□□ -0
SNRPF-204ENST00000552085 NBPF20Q3BBV1 942 aa15.05■□□□□ -0
SNRPF-204ENST00000552085 FAM117BQ6P1L5 589 aa15.05■□□□□ -0
SNRPF-204ENST00000552085 CHST13Q8NET6 341 aa15.05■□□□□ -0
SNRPF-204ENST00000552085 PDGFCQ9NRA1 345 aa15.05■□□□□ -0
SNRPF-204ENST00000552085 INSL6Q9Y581 213 aa15.05■□□□□ -0
SNRPF-204ENST00000552085 BAZ2AQ9UIF9 1905 aaKnown RBP15.04■□□□□ -0
SNRPF-204ENST00000552085 ABHD14A-ACY1A0A1B0GW23 586 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms