RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 F5H6K3 240 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 ZEB2O60315 1214 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 ZBED4O75132 1171 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 ALADP13716 330 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 KLRC3Q07444 240 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 TTF1Q15361 905 aaPredicted RBP15.29■□□□□ 0.04
CACNB3-221ENST00000552022 LEXMQ3ZCV2 418 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 SLFNL1Q499Z3 407 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 FAM133AQ8N9E0 248 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 CHST13Q8NET6 341 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.29■□□□□ 0.04
CACNB3-221ENST00000552022 UBE2ZQ9H832 354 aaPredicted RBP15.29■□□□□ 0.04
CACNB3-221ENST00000552022 SLC38A10Q9HBR0 1119 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 ATP8A2Q9NTI2 1148 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 LMCD1Q9NZU5 365 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 FBXO40Q9UH90 709 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 USP34Q70CQ2 3546 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 TANC1Q9C0D5 1861 aa15.29■□□□□ 0.04
CACNB3-221ENST00000552022 TNKSO95271 1327 aa15.28■□□□□ 0.04
CACNB3-221ENST00000552022 LCHNA4D1U4 455 aa15.28■□□□□ 0.04
CACNB3-221ENST00000552022 SUPT20HL2P0C7V6 817 aa15.28■□□□□ 0.04
CACNB3-221ENST00000552022 IL9P15248 144 aa15.28■□□□□ 0.04
CACNB3-221ENST00000552022 SSTR3P32745 418 aaPredicted RBP15.28■□□□□ 0.04
CACNB3-221ENST00000552022 CSPP1Q1MSJ5 1256 aa15.28■□□□□ 0.04
CACNB3-221ENST00000552022 TAPT1Q6NXT6 567 aa15.28■□□□□ 0.04
CACNB3-221ENST00000552022 GDPD5Q8WTR4 605 aa15.28■□□□□ 0.04
CACNB3-221ENST00000552022 CLUAP1Q96AJ1 413 aa15.28■□□□□ 0.04
CACNB3-221ENST00000552022 KCNH6Q9H252 994 aa15.28■□□□□ 0.04
CACNB3-221ENST00000552022 Q9Y3F1 56 aa15.28■□□□□ 0.04
CACNB3-221ENST00000552022 SIP14410 1827 aa15.27■□□□□ 0.04
CACNB3-221ENST00000552022 NDUFB10O96000 172 aa15.27■□□□□ 0.04
CACNB3-221ENST00000552022 RFC2P35250 354 aa15.27■□□□□ 0.04
CACNB3-221ENST00000552022 IQSEC1Q6DN90 963 aa15.27■□□□□ 0.04
CACNB3-221ENST00000552022 AACSQ86V21 672 aa15.27■□□□□ 0.04
CACNB3-221ENST00000552022 KIFC2Q96AC6 838 aa15.27■□□□□ 0.04
CACNB3-221ENST00000552022 C1orf115Q9H7X2 142 aa15.27■□□□□ 0.04
CACNB3-221ENST00000552022 HOMER2Q9NSB8 354 aa15.27■□□□□ 0.04
CACNB3-221ENST00000552022 CTDP1Q9Y5B0 961 aaPredicted RBP15.27■□□□□ 0.04
CACNB3-221ENST00000552022 SCN10AQ9Y5Y9 1956 aa15.27■□□□□ 0.03
CACNB3-221ENST00000552022 LCTP09848 1927 aa15.27■□□□□ 0.03
CACNB3-221ENST00000552022 POTEB3A0JP26 581 aa15.26■□□□□ 0.03
CACNB3-221ENST00000552022 IPO8O15397 1037 aaKnown RBP15.26■□□□□ 0.03
CACNB3-221ENST00000552022 MBD4O95243 580 aa15.26■□□□□ 0.03
CACNB3-221ENST00000552022 IQCF3P0C7M6 154 aa15.26■□□□□ 0.03
CACNB3-221ENST00000552022 KCNA5P22460 613 aa15.26■□□□□ 0.03
CACNB3-221ENST00000552022 OAZ1P54368 228 aa15.26■□□□□ 0.03
CACNB3-221ENST00000552022 POTEBQ6S5H4 581 aa15.26■□□□□ 0.03
CACNB3-221ENST00000552022 TMCO2Q7Z6W1 182 aaPredicted RBP15.26■□□□□ 0.03
CACNB3-221ENST00000552022 TMEM57Q8N5G2 664 aa15.26■□□□□ 0.03
CACNB3-221ENST00000552022 ANKS1AQ92625 1134 aa15.26■□□□□ 0.03
CACNB3-221ENST00000552022 SUGCTQ9HAC7 445 aa15.26■□□□□ 0.03
CACNB3-221ENST00000552022 A1CFQ9NQ94 594 aaKnown RBP15.26■□□□□ 0.03
CACNB3-221ENST00000552022 NYAP2Q9P242 653 aa15.26■□□□□ 0.03
CACNB3-221ENST00000552022 C5orf42Q9H799 3197 aa15.26■□□□□ 0.03
CACNB3-221ENST00000552022 ASB14A6NK59 587 aa15.25■□□□□ 0.03
CACNB3-221ENST00000552022 GOLIM4O00461 696 aa15.25■□□□□ 0.03
CACNB3-221ENST00000552022 PTCRAQ6ISU1 281 aaPredicted RBP15.25■□□□□ 0.03
CACNB3-221ENST00000552022 CTR9Q6PD62 1173 aa15.25■□□□□ 0.03
CACNB3-221ENST00000552022 EEPD1Q7L9B9 569 aa15.25■□□□□ 0.03
CACNB3-221ENST00000552022 FRAT1Q92837 279 aaPredicted RBP15.25■□□□□ 0.03
CACNB3-221ENST00000552022 FTOQ9C0B1 505 aaKnown RBP eCLIP15.25■□□□□ 0.03
CACNB3-221ENST00000552022 CFAP54Q96N23 3096 aa15.25■□□□□ 0.03
CACNB3-221ENST00000552022 MYH7P12883 1935 aa15.24■□□□□ 0.03
CACNB3-221ENST00000552022 GRXCR2A6NFK2 248 aa15.24■□□□□ 0.03
CACNB3-221ENST00000552022 DCXO43602 365 aa15.24■□□□□ 0.03
CACNB3-221ENST00000552022 PURAQ00577 322 aaKnown RBP15.24■□□□□ 0.03
CACNB3-221ENST00000552022 FBXO16Q8IX29 292 aaPredicted RBP15.24■□□□□ 0.03
CACNB3-221ENST00000552022 AMOTL1Q8IY63 956 aa15.24■□□□□ 0.03
CACNB3-221ENST00000552022 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.24■□□□□ 0.03
CACNB3-221ENST00000552022 PPP1R13LQ8WUF5 828 aa15.24■□□□□ 0.03
CACNB3-221ENST00000552022 PHOX2BQ99453 314 aa15.24■□□□□ 0.03
CACNB3-221ENST00000552022 ACAD9Q9H845 621 aa15.24■□□□□ 0.03
CACNB3-221ENST00000552022 ZNF536O15090 1300 aa15.23■□□□□ 0.03
CACNB3-221ENST00000552022 ZBED9Q6R2W3 1325 aa15.23■□□□□ 0.03
CACNB3-221ENST00000552022 PITPNM1O00562 1244 aa15.23■□□□□ 0.03
CACNB3-221ENST00000552022 BAIAP3O94812 1187 aa15.23■□□□□ 0.03
CACNB3-221ENST00000552022 CHGBP05060 677 aa15.23■□□□□ 0.03
CACNB3-221ENST00000552022 RASA1P20936 1047 aa15.23■□□□□ 0.03
CACNB3-221ENST00000552022 ADD2P35612 726 aa15.23■□□□□ 0.03
CACNB3-221ENST00000552022 RETREG2Q8NC44 543 aa15.23■□□□□ 0.03
CACNB3-221ENST00000552022 DNAJC2Q99543 621 aaKnown RBP15.23■□□□□ 0.03
CACNB3-221ENST00000552022 CLIP2Q9UDT6 1046 aa15.23■□□□□ 0.03
CACNB3-221ENST00000552022 FEM1BQ9UK73 627 aa15.23■□□□□ 0.03
CACNB3-221ENST00000552022 MTUS1Q9ULD2 1270 aa15.23■□□□□ 0.03
CACNB3-221ENST00000552022 COG6Q9Y2V7 657 aa15.23■□□□□ 0.03
CACNB3-221ENST00000552022 ERVK-21P61565 698 aa15.22■□□□□ 0.03
CACNB3-221ENST00000552022 WDR5P61964 334 aaKnown RBP15.22■□□□□ 0.03
CACNB3-221ENST00000552022 GPNMBQ14956 572 aa15.22■□□□□ 0.03
CACNB3-221ENST00000552022 NBPF20Q3BBV1 942 aa15.22■□□□□ 0.03
CACNB3-221ENST00000552022 DUSP28Q4G0W2 176 aa15.22■□□□□ 0.03
CACNB3-221ENST00000552022 KIAA1211Q6ZU35 1233 aa15.22■□□□□ 0.03
CACNB3-221ENST00000552022 HFE2Q6ZVN8 426 aa15.22■□□□□ 0.03
CACNB3-221ENST00000552022 RNF146Q9NTX7 359 aa15.22■□□□□ 0.03
CACNB3-221ENST00000552022 POLR3EQ9NVU0 708 aa15.22■□□□□ 0.03
CACNB3-221ENST00000552022 EXOC6BQ9Y2D4 811 aa15.22■□□□□ 0.03
CACNB3-221ENST00000552022 IGKV6D-41A0A0C4DH26 115 aa15.21■□□□□ 0.03
CACNB3-221ENST00000552022 MYL3P08590 195 aa15.21■□□□□ 0.03
CACNB3-221ENST00000552022 KCNJ6P48051 423 aa15.21■□□□□ 0.03
CACNB3-221ENST00000552022 DEFB103AP81534 67 aa15.21■□□□□ 0.03
CACNB3-221ENST00000552022 FAM47CQ5HY64 1035 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms