RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 RETREG2Q8NC44 543 aa18.31■□□□□ 0.52
CACNB3-220ENST00000551716 KCNH6Q9H252 994 aa18.31■□□□□ 0.52
CACNB3-220ENST00000551716 C1orf115Q9H7X2 142 aa18.31■□□□□ 0.52
CACNB3-220ENST00000551716 MKNK2Q9HBH9 465 aa18.31■□□□□ 0.52
CACNB3-220ENST00000551716 POLR3EQ9NVU0 708 aa18.31■□□□□ 0.52
CACNB3-220ENST00000551716 COG6Q9Y2V7 657 aa18.31■□□□□ 0.52
CACNB3-220ENST00000551716 EPOPA6NHQ4 379 aa18.3■□□□□ 0.52
CACNB3-220ENST00000551716 SMPD1P17405 629 aa18.3■□□□□ 0.52
CACNB3-220ENST00000551716 PSMC6P62333 389 aa18.3■□□□□ 0.52
CACNB3-220ENST00000551716 CNTN2Q02246 1040 aa18.3■□□□□ 0.52
CACNB3-220ENST00000551716 GRB10Q13322 594 aa18.3■□□□□ 0.52
CACNB3-220ENST00000551716 TKFCQ3LXA3 575 aa18.3■□□□□ 0.52
CACNB3-220ENST00000551716 KRT40Q6A162 431 aa18.3■□□□□ 0.52
CACNB3-220ENST00000551716 CTR9Q6PD62 1173 aa18.3■□□□□ 0.52
CACNB3-220ENST00000551716 HERC6Q8IVU3 1022 aa18.3■□□□□ 0.52
CACNB3-220ENST00000551716 RPAP2Q8IXW5 612 aaPredicted RBP18.3■□□□□ 0.52
CACNB3-220ENST00000551716 KHSRPQ92945 711 aaKnown RBP eCLIP18.3■□□□□ 0.52
CACNB3-220ENST00000551716 ARPP21Q9UBL0 812 aaPredicted RBP18.3■□□□□ 0.52
CACNB3-220ENST00000551716 SLC4A4Q9Y6R1 1079 aa18.3■□□□□ 0.52
CACNB3-220ENST00000551716 TNKSO95271 1327 aa18.29■□□□□ 0.52
CACNB3-220ENST00000551716 MRE11P49959 708 aa18.29■□□□□ 0.52
CACNB3-220ENST00000551716 UBE3CQ15386 1083 aa18.29■□□□□ 0.52
CACNB3-220ENST00000551716 GJD3Q8N144 294 aa18.29■□□□□ 0.52
CACNB3-220ENST00000551716 MKL1Q969V6 931 aa18.29■□□□□ 0.52
CACNB3-220ENST00000551716 ZNF287Q9HBT7 754 aa18.29■□□□□ 0.52
CACNB3-220ENST00000551716 PAG1Q9NWQ8 432 aa18.29■□□□□ 0.52
CACNB3-220ENST00000551716 CLIP2Q9UDT6 1046 aa18.29■□□□□ 0.52
CACNB3-220ENST00000551716 EXOC6BQ9Y2D4 811 aa18.29■□□□□ 0.52
CACNB3-220ENST00000551716 REV3LO60673 3130 aa18.28■□□□□ 0.52
CACNB3-220ENST00000551716 PITPNM1O00562 1244 aa18.28■□□□□ 0.52
CACNB3-220ENST00000551716 BAIAP3O94812 1187 aa18.28■□□□□ 0.52
CACNB3-220ENST00000551716 IFIT2P09913 472 aaKnown RBP18.28■□□□□ 0.52
CACNB3-220ENST00000551716 CSPP1Q1MSJ5 1256 aa18.28■□□□□ 0.52
CACNB3-220ENST00000551716 FTSJ3Q8IY81 847 aaKnown RBP18.28■□□□□ 0.52
CACNB3-220ENST00000551716 RHPN1Q8TCX5 695 aa18.28■□□□□ 0.52
CACNB3-220ENST00000551716 FTOQ9C0B1 505 aaKnown RBP eCLIP18.28■□□□□ 0.52
CACNB3-220ENST00000551716 IL1RAPL2Q9NP60 686 aa18.28■□□□□ 0.52
CACNB3-220ENST00000551716 GPHNQ9NQX3 736 aaPredicted RBP18.28■□□□□ 0.52
CACNB3-220ENST00000551716 HOMER2Q9NSB8 354 aa18.28■□□□□ 0.52
CACNB3-220ENST00000551716 ZBED9Q6R2W3 1325 aa18.27■□□□□ 0.52
CACNB3-220ENST00000551716 SOWAHBA6NEL2 793 aa18.27■□□□□ 0.52
CACNB3-220ENST00000551716 CYP2C9P11712 490 aa18.27■□□□□ 0.52
CACNB3-220ENST00000551716 SBK1Q52WX2 424 aa18.27■□□□□ 0.52
CACNB3-220ENST00000551716 BRDTQ58F21 947 aaPredicted RBP18.27■□□□□ 0.52
CACNB3-220ENST00000551716 ZSCAN25Q6NSZ9 544 aa18.27■□□□□ 0.52
CACNB3-220ENST00000551716 VTA1Q9NP79 307 aa18.27■□□□□ 0.52
CACNB3-220ENST00000551716 A1CFQ9NQ94 594 aaKnown RBP18.27■□□□□ 0.52
CACNB3-220ENST00000551716 TRMT13Q9NUP7 481 aaKnown RBP18.27■□□□□ 0.52
CACNB3-220ENST00000551716 GBF1Q92538 1859 aa18.26■□□□□ 0.51
CACNB3-220ENST00000551716 LPXNO60711 386 aa18.26■□□□□ 0.51
CACNB3-220ENST00000551716 RASA1P20936 1047 aa18.26■□□□□ 0.51
CACNB3-220ENST00000551716 KCNJ6P48051 423 aa18.26■□□□□ 0.51
CACNB3-220ENST00000551716 CPT1AP50416 773 aa18.26■□□□□ 0.51
CACNB3-220ENST00000551716 BFSP2Q13515 415 aa18.26■□□□□ 0.51
CACNB3-220ENST00000551716 TAPT1Q6NXT6 567 aa18.26■□□□□ 0.51
CACNB3-220ENST00000551716 CEP85Q6P2H3 762 aa18.26■□□□□ 0.51
CACNB3-220ENST00000551716 KIAA1211Q6ZU35 1233 aa18.26■□□□□ 0.51
CACNB3-220ENST00000551716 ITPRIPQ8IWB1 547 aa18.26■□□□□ 0.51
CACNB3-220ENST00000551716 FAM178BQ8IXR5 827 aa18.26■□□□□ 0.51
CACNB3-220ENST00000551716 GMCL1P1Q8NEA9 526 aa18.26■□□□□ 0.51
CACNB3-220ENST00000551716 CHURC1Q8WUH1 139 aa18.26■□□□□ 0.51
CACNB3-220ENST00000551716 UIMC1Q96RL1 719 aa18.26■□□□□ 0.51
CACNB3-220ENST00000551716 CD320Q9NPF0 282 aa18.26■□□□□ 0.51
CACNB3-220ENST00000551716 RNF146Q9NTX7 359 aa18.26■□□□□ 0.51
CACNB3-220ENST00000551716 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.25■□□□□ 0.51
CACNB3-220ENST00000551716 KPNA6O60684 536 aa18.25■□□□□ 0.51
CACNB3-220ENST00000551716 IQCF3P0C7M6 154 aa18.25■□□□□ 0.51
CACNB3-220ENST00000551716 BMP3P12645 472 aa18.25■□□□□ 0.51
CACNB3-220ENST00000551716 PUS10Q3MIT2 529 aaKnown RBP18.25■□□□□ 0.51
CACNB3-220ENST00000551716 LEXMQ3ZCV2 418 aa18.25■□□□□ 0.51
CACNB3-220ENST00000551716 DUSP28Q4G0W2 176 aa18.25■□□□□ 0.51
CACNB3-220ENST00000551716 GIMAP6Q6P9H5 292 aa18.25■□□□□ 0.51
CACNB3-220ENST00000551716 FAM160B2Q86V87 743 aa18.25■□□□□ 0.51
CACNB3-220ENST00000551716 ZNF444Q8N0Y2 327 aaPredicted RBP18.25■□□□□ 0.51
CACNB3-220ENST00000551716 KIF1BPQ96EK5 621 aa18.25■□□□□ 0.51
CACNB3-220ENST00000551716 TRERF1Q96PN7 1200 aa18.25■□□□□ 0.51
CACNB3-220ENST00000551716 MTG1Q9BT17 334 aaPredicted RBP18.25■□□□□ 0.51
CACNB3-220ENST00000551716 UBE2ZQ9H832 354 aaPredicted RBP18.25■□□□□ 0.51
CACNB3-220ENST00000551716 PDGFCQ9NRA1 345 aa18.25■□□□□ 0.51
CACNB3-220ENST00000551716 LRRC37A2A6NM11 1700 aa18.25■□□□□ 0.51
CACNB3-220ENST00000551716 MYH8P13535 1937 aa18.25■□□□□ 0.51
CACNB3-220ENST00000551716 TTLL1O95922 423 aa18.24■□□□□ 0.51
CACNB3-220ENST00000551716 SSTR3P32745 418 aaPredicted RBP18.24■□□□□ 0.51
CACNB3-220ENST00000551716 STAT2P52630 851 aa18.24■□□□□ 0.51
CACNB3-220ENST00000551716 PURAQ00577 322 aaKnown RBP18.24■□□□□ 0.51
CACNB3-220ENST00000551716 PTPN11Q06124 597 aaPredicted RBP18.24■□□□□ 0.51
CACNB3-220ENST00000551716 LRRFIP1Q32MZ4 808 aaKnown RBP18.24■□□□□ 0.51
CACNB3-220ENST00000551716 NFRKBQ6P4R8 1299 aa18.24■□□□□ 0.51
CACNB3-220ENST00000551716 ZBED2Q9BTP6 218 aa18.24■□□□□ 0.51
CACNB3-220ENST00000551716 LOC102724159A0A0B4J2E5 919 aa18.23■□□□□ 0.51
CACNB3-220ENST00000551716 IGKV6D-41A0A0C4DH26 115 aa18.23■□□□□ 0.51
CACNB3-220ENST00000551716 ATP5JP18859 108 aa18.23■□□□□ 0.51
CACNB3-220ENST00000551716 PWP2Q15269 919 aaKnown RBP18.23■□□□□ 0.51
CACNB3-220ENST00000551716 FAM47CQ5HY64 1035 aa18.23■□□□□ 0.51
CACNB3-220ENST00000551716 SLFN13Q68D06 897 aa18.23■□□□□ 0.51
CACNB3-220ENST00000551716 EEPD1Q7L9B9 569 aa18.23■□□□□ 0.51
CACNB3-220ENST00000551716 MORC4Q8TE76 937 aa18.23■□□□□ 0.51
CACNB3-220ENST00000551716 SNX27Q96L92 541 aa18.23■□□□□ 0.51
CACNB3-220ENST00000551716 MTMR4Q9NYA4 1195 aa18.23■□□□□ 0.51
CACNB3-220ENST00000551716 ADD3Q9UEY8 706 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms