RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 ROBO3Q96MS0 1386 aa8.58□□□□□ -1.04
SMARCD1-210ENST00000551352 MPHOSPH10O00566 681 aaKnown RBP8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 ZBTB43O43298 467 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 ORC4O43929 436 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 SLC3A2P08195 630 aaKnown RBP8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 TAL1P17542 331 aaPredicted RBP8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 METAP2P50579 478 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 ATN1P54259 1190 aaPredicted RBP8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 RTP1P59025 263 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 COG2Q14746 738 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 TMEM132BQ14DG7 1078 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 SART3Q15020 963 aaKnown RBP8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 KLHL40Q2TBA0 621 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 NFXL1Q6ZNB6 911 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 TMEM179Q6ZVK1 233 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 C16orf86Q6ZW13 317 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 RAB11FIP4Q86YS3 637 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 STK11IPQ8N1F8 1099 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 FAM184AQ8NB25 1140 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 TMEM87AQ8NBN3 555 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 SHCBP1Q8NEM2 672 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 LPAR1Q92633 364 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 GUCD1Q96NT3 240 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 TANGO6Q9C0B7 1094 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 UBE2OQ9C0C9 1292 aaKnown RBP8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 SENP6Q9GZR1 1112 aaPredicted RBP8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 VCPKMTQ9H867 229 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 MTMR10Q9NXD2 777 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 TMX2Q9Y320 296 aa8.57□□□□□ -1.04
SMARCD1-210ENST00000551352 ERICH2A1L162 156 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 CCDC69A6NI79 296 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 GOLGA8AA7E2F4 631 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 H3BQV1 296 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 CPLX1O14810 134 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 PRPF40AO75400 957 aaKnown RBP8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 EEF2P13639 858 aaKnown RBP8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 FDPSP14324 419 aaKnown RBP8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 RASA1P20936 1047 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 ITGB8P26012 769 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 NT5C2P49902 561 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 RCAN1P53805 252 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 CCNA1P78396 465 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 IRX5P78411 483 aaPredicted RBP8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 ATP2B2Q01814 1243 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 ICA1Q05084 483 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 RESTQ13127 1097 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 WTAPQ15007 396 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 SNX17Q15036 470 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 SEC23AQ15436 765 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 FOXD4L6Q3SYB3 417 aaPredicted RBP8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 FAM47AQ5JRC9 791 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 MFSD14CQ5VZR4 134 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 OLFML2BQ68BL8 750 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 FOXD4L3Q6VB84 417 aaPredicted RBP8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 SH3RF1Q7Z6J0 888 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 MICU3Q86XE3 530 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 TMTC2Q8N394 836 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 DEFB123Q8N688 67 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 LENG1Q96BZ8 264 aaPredicted RBP8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 MAML3Q96JK9 1138 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 ZKSCAN3Q9BRR0 538 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 UBAC1Q9BSL1 405 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 ZNF214Q9UL59 606 aaPredicted RBP8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 CNPY2Q9Y2B0 182 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 SLC12A7Q9Y666 1083 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 DDX49Q9Y6V7 483 aaKnown RBP8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 CHD7Q9P2D1 2997 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 MYH6P13533 1939 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 PTPRSQ13332 1948 aa8.56□□□□□ -1.04
SMARCD1-210ENST00000551352 TNKSO95271 1327 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 IGKV6D-41A0A0C4DH26 115 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 POTEB2H3BUK9 544 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 DNM1LO00429 736 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 WDR46O15213 610 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 ADCY6O43306 1168 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 RANBP6O60518 1105 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 PRDM1O75626 825 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 CDKL5O76039 1030 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 MBD3O95983 291 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 PGK2P07205 417 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 RXRAP19793 462 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 CNGA1P29973 690 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 CDC27P30260 824 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 DEKP35659 375 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 DNM1Q05193 864 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 PDE4BQ07343 736 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 LRRC41Q15345 812 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 C9orf50Q5SZB4 431 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 GPR153Q6NV75 609 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 CPLX2Q6PUV4 134 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 SYNE3Q6ZMZ3 975 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 FERMT3Q86UX7 667 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 IQCA1Q86XH1 822 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 CCAR1Q8IX12 1150 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 AMOTL1Q8IY63 956 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 ZNF654Q8IZM8 581 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 ENAHQ8N8S7 591 aaPredicted RBP8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 FGD4Q96M96 766 aa8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 ZSCAN10Q96SZ4 725 aaPredicted RBP8.55□□□□□ -1.04
SMARCD1-210ENST00000551352 NUP88Q99567 741 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms