RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 ASIC4Q96FT7 647 aa13.78□□□□□ -0.2
GPN3-208ENST00000550974 KATNBL1Q9H079 304 aa13.78□□□□□ -0.2
GPN3-208ENST00000550974 GNEQ9Y223 722 aaKnown RBP13.78□□□□□ -0.2
GPN3-208ENST00000550974 AKAP2Q9Y2D5 859 aa13.78□□□□□ -0.2
GPN3-208ENST00000550974 PITPNM1O00562 1244 aa13.77□□□□□ -0.21
GPN3-208ENST00000550974 WDR46O15213 610 aaKnown RBP13.77□□□□□ -0.21
GPN3-208ENST00000550974 MCAMP43121 646 aa13.77□□□□□ -0.21
GPN3-208ENST00000550974 PLCD1P51178 756 aa13.77□□□□□ -0.21
GPN3-208ENST00000550974 NUBP1P53384 320 aa13.77□□□□□ -0.21
GPN3-208ENST00000550974 TFCP2Q12800 502 aa13.77□□□□□ -0.21
GPN3-208ENST00000550974 PTPRSQ13332 1948 aa13.77□□□□□ -0.21
GPN3-208ENST00000550974 FOCADQ5VW36 1801 aa13.77□□□□□ -0.21
GPN3-208ENST00000550974 MAGEB6Q8N7X4 407 aa13.77□□□□□ -0.21
GPN3-208ENST00000550974 VCPKMTQ9H867 229 aa13.77□□□□□ -0.21
GPN3-208ENST00000550974 SNRKQ9NRH2 765 aa13.77□□□□□ -0.21
GPN3-208ENST00000550974 RIPK3Q9Y572 518 aa13.77□□□□□ -0.21
GPN3-208ENST00000550974 KMT2BQ9UMN6 2715 aaPredicted RBP13.77□□□□□ -0.21
GPN3-208ENST00000550974 SIP14410 1827 aa13.76□□□□□ -0.21
GPN3-208ENST00000550974 SMAD4Q13485 552 aaKnown RBP13.76□□□□□ -0.21
GPN3-208ENST00000550974 SNRNP48Q6IEG0 339 aaKnown RBP13.76□□□□□ -0.21
GPN3-208ENST00000550974 CLEC10AQ8IUN9 316 aa13.76□□□□□ -0.21
GPN3-208ENST00000550974 REPS2Q8NFH8 660 aa13.76□□□□□ -0.21
GPN3-208ENST00000550974 PPP1R13LQ8WUF5 828 aa13.76□□□□□ -0.21
GPN3-208ENST00000550974 FGD4Q96M96 766 aa13.76□□□□□ -0.21
GPN3-208ENST00000550974 ARHGEF10LQ9HCE6 1279 aa13.76□□□□□ -0.21
GPN3-208ENST00000550974 TMX2Q9Y320 296 aa13.76□□□□□ -0.21
GPN3-208ENST00000550974 COL11A1P12107 1806 aaPredicted RBP13.76□□□□□ -0.21
GPN3-208ENST00000550974 SMPD1P17405 629 aa13.75□□□□□ -0.21
GPN3-208ENST00000550974 ARID4AP29374 1257 aaPredicted RBP13.75□□□□□ -0.21
GPN3-208ENST00000550974 GPM6BQ13491 265 aa13.75□□□□□ -0.21
GPN3-208ENST00000550974 BFSP2Q13515 415 aa13.75□□□□□ -0.21
GPN3-208ENST00000550974 ST3GAL2Q16842 350 aa13.75□□□□□ -0.21
GPN3-208ENST00000550974 EPC2Q52LR7 807 aa13.75□□□□□ -0.21
GPN3-208ENST00000550974 ANKRD35Q8N283 1001 aa13.75□□□□□ -0.21
GPN3-208ENST00000550974 TEX13BQ9BXU2 312 aa13.75□□□□□ -0.21
GPN3-208ENST00000550974 PPP1R9AQ9ULJ8 1098 aa13.75□□□□□ -0.21
GPN3-208ENST00000550974 TRIOO75962 3097 aa13.75□□□□□ -0.21
GPN3-208ENST00000550974 NCK2O43639 380 aa13.74□□□□□ -0.21
GPN3-208ENST00000550974 PDGFBP01127 241 aaPredicted RBP13.74□□□□□ -0.21
GPN3-208ENST00000550974 POLR3DP05423 398 aaPredicted RBP13.74□□□□□ -0.21
GPN3-208ENST00000550974 PUM1Q14671 1186 aaKnown RBP eCLIP13.74□□□□□ -0.21
GPN3-208ENST00000550974 CTC1Q2NKJ3 1217 aa13.74□□□□□ -0.21
GPN3-208ENST00000550974 MCTP2Q6DN12 878 aa13.74□□□□□ -0.21
GPN3-208ENST00000550974 TMEM179Q6ZVK1 233 aa13.74□□□□□ -0.21
GPN3-208ENST00000550974 SIAH1Q8IUQ4 282 aa13.74□□□□□ -0.21
GPN3-208ENST00000550974 MIGA1Q8NAN2 632 aa13.74□□□□□ -0.21
GPN3-208ENST00000550974 SH2D4AQ9H788 454 aa13.74□□□□□ -0.21
GPN3-208ENST00000550974 CD207Q9UJ71 328 aa13.74□□□□□ -0.21
GPN3-208ENST00000550974 RALYQ9UKM9 306 aaKnown RBP13.74□□□□□ -0.21
GPN3-208ENST00000550974 INSL6Q9Y581 213 aa13.74□□□□□ -0.21
GPN3-208ENST00000550974 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.74□□□□□ -0.21
GPN3-208ENST00000550974 H3BNC9 293 aa13.73□□□□□ -0.21
GPN3-208ENST00000550974 RAD21O60216 631 aa13.73□□□□□ -0.21
GPN3-208ENST00000550974 CYP7A1P22680 504 aa13.73□□□□□ -0.21
GPN3-208ENST00000550974 TMEM63BQ5T3F8 832 aa13.73□□□□□ -0.21
GPN3-208ENST00000550974 CNKSR3Q6P9H4 555 aa13.73□□□□□ -0.21
GPN3-208ENST00000550974 CPXCR1Q8N123 301 aa13.73□□□□□ -0.21
GPN3-208ENST00000550974 COPRSQ9NQ92 184 aa13.73□□□□□ -0.21
GPN3-208ENST00000550974 NOD1Q9Y239 953 aa13.73□□□□□ -0.21
GPN3-208ENST00000550974 DMDP11532 3685 aa13.73□□□□□ -0.21
GPN3-208ENST00000550974 BAHCC1Q9P281 2608 aa13.73□□□□□ -0.21
GPN3-208ENST00000550974 MYH1P12882 1939 aa13.72□□□□□ -0.21
GPN3-208ENST00000550974 LOC730098B7Z3J9 87 aa13.72□□□□□ -0.21
GPN3-208ENST00000550974 RBAK-RBAKDNI3L0D1 243 aa13.72□□□□□ -0.21
GPN3-208ENST00000550974 TBX10O75333 385 aa13.72□□□□□ -0.21
GPN3-208ENST00000550974 MYL3P08590 195 aa13.72□□□□□ -0.21
GPN3-208ENST00000550974 UQCRFS1P1P0C7P4 283 aa13.72□□□□□ -0.21
GPN3-208ENST00000550974 EVX2Q03828 476 aa13.72□□□□□ -0.21
GPN3-208ENST00000550974 ICA1Q05084 483 aa13.72□□□□□ -0.21
GPN3-208ENST00000550974 GPNMBQ14956 572 aa13.72□□□□□ -0.21
GPN3-208ENST00000550974 TCTN1Q2MV58 587 aa13.72□□□□□ -0.21
GPN3-208ENST00000550974 LRRFIP1Q32MZ4 808 aaKnown RBP13.72□□□□□ -0.21
GPN3-208ENST00000550974 KIAA2013Q8IYS2 634 aa13.72□□□□□ -0.21
GPN3-208ENST00000550974 IGFLR1Q9H665 355 aa13.72□□□□□ -0.21
GPN3-208ENST00000550974 PDGFCQ9NRA1 345 aa13.72□□□□□ -0.21
GPN3-208ENST00000550974 PARP14Q460N5 1801 aa13.71□□□□□ -0.21
GPN3-208ENST00000550974 ABHD14A-ACY1A0A1B0GW23 586 aa13.71□□□□□ -0.21
GPN3-208ENST00000550974 CNTN2Q02246 1040 aa13.71□□□□□ -0.21
GPN3-208ENST00000550974 GABPAQ06546 454 aa13.71□□□□□ -0.21
GPN3-208ENST00000550974 HYAL1Q12794 435 aa13.71□□□□□ -0.21
GPN3-208ENST00000550974 FAM83BQ5T0W9 1011 aa13.71□□□□□ -0.21
GPN3-208ENST00000550974 EEPD1Q7L9B9 569 aa13.71□□□□□ -0.21
GPN3-208ENST00000550974 RIPOR3Q96MK2 946 aa13.71□□□□□ -0.21
GPN3-208ENST00000550974 SAMD11Q96NU1 681 aa13.71□□□□□ -0.21
GPN3-208ENST00000550974 GPHNQ9NQX3 736 aaPredicted RBP13.71□□□□□ -0.21
GPN3-208ENST00000550974 POLR3EQ9NVU0 708 aa13.71□□□□□ -0.21
GPN3-208ENST00000550974 Q9Y3F1 56 aa13.71□□□□□ -0.21
GPN3-208ENST00000550974 TANC1Q9C0D5 1861 aa13.71□□□□□ -0.21
GPN3-208ENST00000550974 DNAH14Q0VDD8 3507 aa13.71□□□□□ -0.21
GPN3-208ENST00000550974 FAM186AA6NE01 2351 aa13.7□□□□□ -0.22
GPN3-208ENST00000550974 CACNA1HO95180 2353 aa13.7□□□□□ -0.22
GPN3-208ENST00000550974 LINC01565O15544 149 aa13.7□□□□□ -0.22
GPN3-208ENST00000550974 CYP2E1P05181 493 aaPredicted RBP13.7□□□□□ -0.22
GPN3-208ENST00000550974 UBTFL1P0CB47 393 aaPredicted RBP13.7□□□□□ -0.22
GPN3-208ENST00000550974 GTF2F1P35269 517 aaKnown RBP eCLIP13.7□□□□□ -0.22
GPN3-208ENST00000550974 PURAQ00577 322 aaKnown RBP13.7□□□□□ -0.22
GPN3-208ENST00000550974 IKBKEQ14164 716 aa13.7□□□□□ -0.22
GPN3-208ENST00000550974 IQSEC1Q6DN90 963 aa13.7□□□□□ -0.22
GPN3-208ENST00000550974 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.7□□□□□ -0.221e-8■■■■■ 27.7
GPN3-208ENST00000550974 TMEM105Q8N8V8 129 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms