RNA–Protein interactions for RNA: ENST00000550103.2

EFCAB11-203, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-203ENST00000550103 FANCLQ9NW38 375 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 CHPF2Q9P2E5 772 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 MAPK8IP1Q9UQF2 711 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 TNNQ9UQP3 1299 aa8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 DDX60Q8IY21 1712 aaKnown RBP8.36□□□□□ -1.07
EFCAB11-203ENST00000550103 ZNF252P-AS1Q0IIN9 211 aa8.35□□□□□ -1.07
EFCAB11-203ENST00000550103 AP3B2Q13367 1082 aa8.35□□□□□ -1.07
EFCAB11-203ENST00000550103 ZNF468Q5VIY5 522 aaPredicted RBP8.35□□□□□ -1.07
EFCAB11-203ENST00000550103 SLC4A10Q6U841 1118 aa8.35□□□□□ -1.07
EFCAB11-203ENST00000550103 LSRQ86X29 649 aaPredicted RBP8.35□□□□□ -1.07
EFCAB11-203ENST00000550103 SLC16A10Q8TF71 515 aa8.35□□□□□ -1.07
EFCAB11-203ENST00000550103 DNAAF4Q8WXU2 420 aa8.35□□□□□ -1.07
EFCAB11-203ENST00000550103 TNFRSF25Q93038 417 aa8.35□□□□□ -1.07
EFCAB11-203ENST00000550103 ZBTB1Q9Y2K1 713 aa8.35□□□□□ -1.07
EFCAB11-203ENST00000550103 PCDHB14Q9Y5E9 798 aa8.35□□□□□ -1.07
EFCAB11-203ENST00000550103 COL4A3BPQ9Y5P4 624 aa8.35□□□□□ -1.07
EFCAB11-203ENST00000550103 PRAMEF22A3QJZ6 481 aa8.34□□□□□ -1.07
EFCAB11-203ENST00000550103 RAB11FIP3O75154 756 aa8.34□□□□□ -1.07
EFCAB11-203ENST00000550103 RPS6KA4O75676 772 aa8.34□□□□□ -1.07
EFCAB11-203ENST00000550103 ALDH1L1O75891 902 aa8.34□□□□□ -1.07
EFCAB11-203ENST00000550103 ESRRAP11474 423 aaPredicted RBP8.34□□□□□ -1.07
EFCAB11-203ENST00000550103 CYP19A1P11511 503 aaPredicted RBP8.34□□□□□ -1.07
EFCAB11-203ENST00000550103 RFC4P35249 363 aa8.34□□□□□ -1.07
EFCAB11-203ENST00000550103 CTBSQ01459 385 aa8.34□□□□□ -1.07
EFCAB11-203ENST00000550103 NEXNQ0ZGT2 675 aa8.34□□□□□ -1.07
EFCAB11-203ENST00000550103 KSR2Q6VAB6 950 aa8.34□□□□□ -1.07
EFCAB11-203ENST00000550103 FAM35AQ86V20 835 aa8.34□□□□□ -1.07
EFCAB11-203ENST00000550103 GRIN3AQ8TCU5 1115 aa8.34□□□□□ -1.07
EFCAB11-203ENST00000550103 GAL3ST3Q96A11 431 aa8.34□□□□□ -1.07
EFCAB11-203ENST00000550103 KIFC2Q96AC6 838 aa8.34□□□□□ -1.07
EFCAB11-203ENST00000550103 TMEM260Q9NX78 707 aa8.34□□□□□ -1.07
EFCAB11-203ENST00000550103 FRRS1LQ9P0K9 344 aa8.34□□□□□ -1.07
EFCAB11-203ENST00000550103 USP42Q9H9J4 1324 aaKnown RBP8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 SOBPA7XYQ1 873 aa8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 SBF1O95248 1867 aa8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 STARD3NLO95772 234 aa8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 GNAI2P04899 355 aa8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 PIP4K2AP48426 406 aaPredicted RBP8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 TBC1D8BQ0IIM8 1120 aa8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 IKBKEQ14164 716 aa8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 TRAPPC3LQ5T215 181 aa8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 LARP1BQ659C4 914 aaKnown RBP8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 INTS5Q6P9B9 1019 aaKnown RBP8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 ELMSAN1Q6PJG2 1045 aa8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 G2E3Q7L622 706 aa8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 SMC5Q8IY18 1101 aa8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 STK35Q8TDR2 534 aa8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 THAP3Q8WTV1 239 aaPredicted RBP8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 TTC9Q92623 222 aa8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 ZNF669Q96BR6 464 aaPredicted RBP8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 TM9SF2Q99805 663 aa8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 SENP2Q9HC62 589 aa8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 PCDH12Q9NPG4 1184 aa8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 SRP68Q9UHB9 627 aaKnown RBP8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 DICER1Q9UPY3 1922 aaKnown RBP8.33□□□□□ -1.08
EFCAB11-203ENST00000550103 TAF1P21675 1872 aa8.32□□□□□ -1.08
EFCAB11-203ENST00000550103 C10orf71Q711Q0 1435 aa8.32□□□□□ -1.08
EFCAB11-203ENST00000550103 UBTFL1P0CB47 393 aaPredicted RBP8.32□□□□□ -1.08
EFCAB11-203ENST00000550103 CPB1P15086 417 aa8.32□□□□□ -1.08
EFCAB11-203ENST00000550103 PPP2R5EQ16537 467 aa8.32□□□□□ -1.08
EFCAB11-203ENST00000550103 MTERF2Q49AM1 385 aa8.32□□□□□ -1.08
EFCAB11-203ENST00000550103 C16orf86Q6ZW13 317 aa8.32□□□□□ -1.08
EFCAB11-203ENST00000550103 KIAA0907Q7Z7F0 614 aaPredicted RBP8.32□□□□□ -1.08
EFCAB11-203ENST00000550103 ANKRD44Q8N8A2 993 aa8.32□□□□□ -1.08
EFCAB11-203ENST00000550103 LINS1Q8NG48 757 aa8.32□□□□□ -1.08
EFCAB11-203ENST00000550103 TNKS2Q9H2K2 1166 aa8.32□□□□□ -1.08
EFCAB11-203ENST00000550103 SOX17Q9H6I2 414 aaPredicted RBP8.32□□□□□ -1.08
EFCAB11-203ENST00000550103 PHAXQ9H814 394 aaKnown RBP8.32□□□□□ -1.08
EFCAB11-203ENST00000550103 SLC6A14Q9UN76 642 aa8.32□□□□□ -1.08
EFCAB11-203ENST00000550103 SLC12A7Q9Y666 1083 aa8.32□□□□□ -1.08
EFCAB11-203ENST00000550103 ESYT3A0FGR9 886 aa8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 PI4KAP2A4QPH2 592 aa8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 NRG2O14511 850 aaPredicted RBP8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 EIF5BO60841 1220 aaKnown RBP8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 IGHDP01880 384 aa8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 GSTP1P09211 210 aaKnown RBP8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 C2orf27AQ580R0 203 aa8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 PERM1Q5SV97 790 aa8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 KANK3Q6NY19 840 aa8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 PDZD3Q86UT5 571 aa8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 SYNPOQ8N3V7 929 aa8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 PI4KAP1Q8N8J0 262 aa8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 JMYQ8N9B5 988 aa8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 ST13P5Q8NFI4 369 aaPredicted RBP8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 SMG9Q9H0W8 520 aaKnown RBP8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 CACNA2D2Q9NY47 1150 aa8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 POLR3KQ9Y2Y1 108 aaPredicted RBP8.31□□□□□ -1.08
EFCAB11-203ENST00000550103 A0A1B0GUL6 1792 aa8.3□□□□□ -1.08
EFCAB11-203ENST00000550103 FER1L6Q2WGJ9 1857 aa8.3□□□□□ -1.08
EFCAB11-203ENST00000550103 MEIS3P2A8K0S8 358 aa8.3□□□□□ -1.08
EFCAB11-203ENST00000550103 ADARB2-AS1A8MUL3 147 aa8.3□□□□□ -1.08
EFCAB11-203ENST00000550103 DDAH1O94760 285 aa8.3□□□□□ -1.08
EFCAB11-203ENST00000550103 A1BGP04217 495 aa8.3□□□□□ -1.08
EFCAB11-203ENST00000550103 MMP10P09238 476 aa8.3□□□□□ -1.08
EFCAB11-203ENST00000550103 BMP4P12644 408 aa8.3□□□□□ -1.08
EFCAB11-203ENST00000550103 GYS1P13807 737 aa8.3□□□□□ -1.08
EFCAB11-203ENST00000550103 CDC27P30260 824 aa8.3□□□□□ -1.08
EFCAB11-203ENST00000550103 BEND3Q5T5X7 828 aa8.3□□□□□ -1.08
EFCAB11-203ENST00000550103 MAP1SQ66K74 1059 aaPredicted RBP8.3□□□□□ -1.08
EFCAB11-203ENST00000550103 ADAMTSL4Q6UY14 1074 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms